Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 148728184

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148728184 ret finger protein-like 2 isoform 1 [Homo sapiens]
         (317 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148728184 ret finger protein-like 2 isoform 1 [Homo sapiens]       648   0.0  
gi|149408135 ret finger protein-like 3 isoform 1 [Homo sapiens]       608   e-174
gi|227116303 ret finger protein-like 2 isoform 2 [Homo sapiens]       593   e-170
gi|227116308 ret finger protein-like 2 isoform 3 [Homo sapiens]       589   e-169
gi|227116306 ret finger protein-like 2 isoform 3 [Homo sapiens]       589   e-169
gi|149408130 ret finger protein-like 1 [Homo sapiens]                 587   e-168
gi|5730013 ret finger protein-like 3 isoform 2 [Homo sapiens]         557   e-159
gi|222446629 ret finger protein-like 4A [Homo sapiens]                325   3e-89
gi|5730009 ret finger protein [Homo sapiens]                          150   1e-36
gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo ...   149   2e-36
gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo...   149   2e-36
gi|153791360 ret finger protein-like 4B [Homo sapiens]                147   2e-35
gi|4557743 Mediterranean fever protein [Homo sapiens]                 145   4e-35
gi|222418658 butyrophilin, subfamily 3, member A1 isoform c [Hom...   145   5e-35
gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo...   145   5e-35
gi|31542779 tripartite motif family-like 1 [Homo sapiens]             141   7e-34
gi|15208660 tripartite motif protein 21 [Homo sapiens]                140   1e-33
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]      134   8e-32
gi|31881693 butyrophilin, subfamily 2, member A2 isoform b [Homo...   134   8e-32
gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo ...   134   8e-32
gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precur...   134   1e-31
gi|21630277 tripartite motif-containing 11 [Homo sapiens]             132   3e-31
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]   131   7e-31
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]   131   7e-31
gi|63054855 erythroblast membrane-associated protein precursor [...   126   2e-29
gi|19923536 erythroblast membrane-associated protein precursor [...   126   2e-29
gi|5454014 tripartite motif-containing 38 [Homo sapiens]              125   4e-29
gi|37595541 tripartite motif-containing 69 isoform b [Homo sapiens]   122   3e-28
gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]   122   3e-28
gi|37622899 ring finger protein 137 [Homo sapiens]                    119   5e-27

>gi|148728184 ret finger protein-like 2 isoform 1 [Homo sapiens]
          Length = 317

 Score =  648 bits (1672), Expect = 0.0
 Identities = 317/317 (100%), Positives = 317/317 (100%)

Query: 1   MKRLSLVTTNRLSPHGNFFTLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 60
           MKRLSLVTTNRLSPHGNFFTLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC
Sbjct: 1   MKRLSLVTTNRLSPHGNFFTLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 60

Query: 61  LKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRM 120
           LKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRM
Sbjct: 61  LKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRM 120

Query: 121 RKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRH 180
           RKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRH
Sbjct: 121 RKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRH 180

Query: 181 CWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDR 240
           CWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDR
Sbjct: 181 CWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDR 240

Query: 241 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICP 300
           KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICP
Sbjct: 241 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICP 300

Query: 301 LMNSGTTDAPVRPGEAK 317
           LMNSGTTDAPVRPGEAK
Sbjct: 301 LMNSGTTDAPVRPGEAK 317


>gi|149408135 ret finger protein-like 3 isoform 1 [Homo sapiens]
          Length = 317

 Score =  608 bits (1568), Expect = e-174
 Identities = 298/317 (94%), Positives = 304/317 (95%)

Query: 1   MKRLSLVTTNRLSPHGNFFTLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 60
           MKRLSLVTTNRLSP GNF  LCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGC VC
Sbjct: 1   MKRLSLVTTNRLSPQGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCTVC 60

Query: 61  LKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRM 120
           LKCINSLQKEPHGEDLLCCC SMVS++NKIR NRQLERL SHIKELEPKLKKILQMNPRM
Sbjct: 61  LKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNRQLERLVSHIKELEPKLKKILQMNPRM 120

Query: 121 RKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRH 180
           RKFQVDMTLDA+TANNFLLISDDLRSVRSG I QNRQDLAERFDVSVCILGSPRFTCGRH
Sbjct: 121 RKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRH 180

Query: 181 CWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDR 240
            WEVDVGTSTEWDLGVCRESVH KG+IQLTTELGFWTVSLRDG RLSA+TVPLTFL VDR
Sbjct: 181 YWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDR 240

Query: 241 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICP 300
           KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPS+PPNGDQGVLSICP
Sbjct: 241 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGDQGVLSICP 300

Query: 301 LMNSGTTDAPVRPGEAK 317
           LMNSGTTDAPVRPGEAK
Sbjct: 301 LMNSGTTDAPVRPGEAK 317


>gi|227116303 ret finger protein-like 2 isoform 2 [Homo sapiens]
          Length = 378

 Score =  593 bits (1529), Expect = e-170
 Identities = 290/290 (100%), Positives = 290/290 (100%)

Query: 28  VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRK 87
           VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRK
Sbjct: 89  VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRK 148

Query: 88  NKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSV 147
           NKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSV
Sbjct: 149 NKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSV 208

Query: 148 RSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRI 207
           RSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRI
Sbjct: 209 RSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRI 268

Query: 208 QLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHV 267
           QLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHV
Sbjct: 269 QLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHV 328

Query: 268 YTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 317
           YTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 329 YTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 378


>gi|227116308 ret finger protein-like 2 isoform 3 [Homo sapiens]
          Length = 288

 Score =  589 bits (1519), Expect = e-169
 Identities = 288/288 (100%), Positives = 288/288 (100%)

Query: 30  MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 89
           MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK
Sbjct: 1   MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 60

Query: 90  IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 149
           IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS
Sbjct: 61  IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 120

Query: 150 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 209
           GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL
Sbjct: 121 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 180

Query: 210 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 269
           TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 181 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240

Query: 270 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 317
           FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288


>gi|227116306 ret finger protein-like 2 isoform 3 [Homo sapiens]
          Length = 288

 Score =  589 bits (1519), Expect = e-169
 Identities = 288/288 (100%), Positives = 288/288 (100%)

Query: 30  MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 89
           MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK
Sbjct: 1   MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 60

Query: 90  IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 149
           IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS
Sbjct: 61  IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 120

Query: 150 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 209
           GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL
Sbjct: 121 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 180

Query: 210 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 269
           TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 181 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240

Query: 270 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 317
           FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288


>gi|149408130 ret finger protein-like 1 [Homo sapiens]
          Length = 317

 Score =  587 bits (1514), Expect = e-168
 Identities = 288/317 (90%), Positives = 296/317 (93%)

Query: 1   MKRLSLVTTNRLSPHGNFFTLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 60
           MKRLSLVTTNRLSPHGNF  LCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC
Sbjct: 1   MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC 60

Query: 61  LKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRM 120
            KCINSLQKEPHGEDLLCCC SMVS+KNKIR + QLERLASHIKELEPKLKKILQMNPRM
Sbjct: 61  FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM 120

Query: 121 RKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRH 180
           RKFQVDMTLDA+TANNFLLISDDLRSVRSG I QNRQDLAERFDVS+CILGSPRFTCGRH
Sbjct: 121 RKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH 180

Query: 181 CWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDR 240
            WEVDVGTSTEWDLGVCRESVHRKGRI LTTE GFWTVSLRDG RLSA+TVPLTFLFVDR
Sbjct: 181 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR 240

Query: 241 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICP 300
           KLQRVGIFLDMGMQNVSFFDAE GSHVYTFRSVSAEEPL  F AP  PPNGD+ VLSICP
Sbjct: 241 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICP 300

Query: 301 LMNSGTTDAPVRPGEAK 317
           ++N GTTDAPV PGEAK
Sbjct: 301 VINPGTTDAPVHPGEAK 317


>gi|5730013 ret finger protein-like 3 isoform 2 [Homo sapiens]
          Length = 288

 Score =  557 bits (1435), Expect = e-159
 Identities = 272/288 (94%), Positives = 278/288 (96%)

Query: 30  MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 89
           MAALFQEASSCPVCSDYLEKPMSLECGC VCLKCINSLQKEPHGEDLLCCC SMVS++NK
Sbjct: 1   MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60

Query: 90  IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 149
           IR NRQLERL SHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSVRS
Sbjct: 61  IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120

Query: 150 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 209
           G I QNRQDLAERFDVSVCILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVH KG+IQL
Sbjct: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180

Query: 210 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 269
           TTELGFWTVSLRDG RLSA+TVPLTFL VDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240

Query: 270 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 317
           FRSVSAEEPLRPFLAPS+PPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288


>gi|222446629 ret finger protein-like 4A [Homo sapiens]
          Length = 287

 Score =  325 bits (833), Expect = 3e-89
 Identities = 158/282 (56%), Positives = 207/282 (73%)

Query: 30  MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 89
           MA  F++   CPVC   LE+ + L+CG A CL+C+NSLQKEP GE LLC   S+VS+K+ 
Sbjct: 1   MAEHFKQIIRCPVCLKDLEEAVQLKCGYACCLQCLNSLQKEPDGEGLLCRFCSVVSQKDD 60

Query: 90  IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 149
           I+   +L  L S IKELEPKLK +L MNPRMRKFQVDMT D +TANN+L+IS+DLRS RS
Sbjct: 61  IKPKYKLRALVSIIKELEPKLKSVLTMNPRMRKFQVDMTFDVDTANNYLIISEDLRSFRS 120

Query: 150 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 209
           G + QNR++ AERFD ++C+LG+PRFT GRH WEVDVGTS  WD+GVC+ESV+R+G+I L
Sbjct: 121 GDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGTSQVWDVGVCKESVNRQGKIVL 180

Query: 210 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 269
           ++E GF TV  R+G   +A+TVP+T L+V  +L RVGIFLD+GM++++F++   G H+YT
Sbjct: 181 SSEHGFLTVGCREGKVFAASTVPMTPLWVSPQLHRVGIFLDVGMRSIAFYNVSDGCHIYT 240

Query: 270 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPV 311
           F  +   EP RPF A       DQ +LSIC ++N     APV
Sbjct: 241 FIEIPVCEPWRPFFAHKRGSQDDQSILSICSVINPSAASAPV 282


>gi|5730009 ret finger protein [Homo sapiens]
          Length = 513

 Score =  150 bits (380), Expect = 1e-36
 Identities = 81/205 (39%), Positives = 118/205 (57%), Gaps = 1/205 (0%)

Query: 97  ERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNR 156
           E L    ++++  ++KI ++    + + VD+TLD +TA   L++SD+LR VR   ++Q+ 
Sbjct: 289 ESLKQFTEKMQSDMEKIQELR-EAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDL 347

Query: 157 QDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFW 216
            D  ERF++  C+LGSP F  GRH WEV+VG   +W +GVC +SV RKG +    + GFW
Sbjct: 348 PDNPERFNLFPCVLGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFW 407

Query: 217 TVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAE 276
            VSL  G    A T P+T L +   LQRVGIFLD     VSF++     H +TF   +  
Sbjct: 408 AVSLWYGKEYWALTSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFC 467

Query: 277 EPLRPFLAPSVPPNGDQGVLSICPL 301
            P+RP+ + S         L ICP+
Sbjct: 468 GPVRPYFSLSYSGGKSAAPLIICPM 492



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 30  MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 89
           +A   Q+ ++CPVC  Y  +PM L+CG  +C  C+               C     +++ 
Sbjct: 6   VAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRH- 64

Query: 90  IRRNRQLERLASHIKEL 106
           +R NR L  +   +K+L
Sbjct: 65  MRPNRHLANVTQLVKQL 81


>gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo
           sapiens]
          Length = 584

 Score =  149 bits (377), Expect = 2e-36
 Identities = 88/241 (36%), Positives = 128/241 (53%), Gaps = 27/241 (11%)

Query: 84  VSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQ------------------- 124
           ++   +  R R+++ +     E E  L++ LQ   + RK Q                   
Sbjct: 278 IALSRETEREREMKEMGYAATEQEISLREKLQEELKWRKIQYMARGEKSLAYHEWKMALF 337

Query: 125 --VDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCW 182
              D+ LD +TAN  LL+S+D RSV+     ++  D  ERF+   C+LG   FT GRH W
Sbjct: 338 KPADVILDPDTANAILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTSGRHYW 397

Query: 183 EVDVGTSTEWDLGVCRESVHR-KGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRK 241
           EV+VG   EW +GVC ++V R KG +++T E G+WT+ L DG +  A T P T L +   
Sbjct: 398 EVEVGDRKEWHIGVCSKNVERKKGWVKMTPENGYWTMGLTDGNKYRALTEPRTNLKLPEP 457

Query: 242 LQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSVPPNGDQGVLSICP 300
            ++VGIFLD     +SF++A  GSH+YTF   S  EPL P F   ++ P      L+ICP
Sbjct: 458 PRKVGIFLDYETGEISFYNATDGSHIYTFPHASFSEPLYPVFRILTLEPT----ALTICP 513

Query: 301 L 301
           +
Sbjct: 514 I 514


>gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo
           sapiens]
          Length = 542

 Score =  149 bits (377), Expect = 2e-36
 Identities = 88/241 (36%), Positives = 128/241 (53%), Gaps = 27/241 (11%)

Query: 84  VSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQ------------------- 124
           ++   +  R R+++ +     E E  L++ LQ   + RK Q                   
Sbjct: 236 IALSRETEREREMKEMGYAATEQEISLREKLQEELKWRKIQYMARGEKSLAYHEWKMALF 295

Query: 125 --VDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCW 182
              D+ LD +TAN  LL+S+D RSV+     ++  D  ERF+   C+LG   FT GRH W
Sbjct: 296 KPADVILDPDTANAILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTSGRHYW 355

Query: 183 EVDVGTSTEWDLGVCRESVHR-KGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRK 241
           EV+VG   EW +GVC ++V R KG +++T E G+WT+ L DG +  A T P T L +   
Sbjct: 356 EVEVGDRKEWHIGVCSKNVERKKGWVKMTPENGYWTMGLTDGNKYRALTEPRTNLKLPEP 415

Query: 242 LQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSVPPNGDQGVLSICP 300
            ++VGIFLD     +SF++A  GSH+YTF   S  EPL P F   ++ P      L+ICP
Sbjct: 416 PRKVGIFLDYETGEISFYNATDGSHIYTFPHASFSEPLYPVFRILTLEPT----ALTICP 471

Query: 301 L 301
           +
Sbjct: 472 I 472


>gi|153791360 ret finger protein-like 4B [Homo sapiens]
          Length = 263

 Score =  147 bits (370), Expect = 2e-35
 Identities = 98/273 (35%), Positives = 143/273 (52%), Gaps = 12/273 (4%)

Query: 30  MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLC-CCSSMVSRKN 88
           MA   Q   SCPVC D+    +SL C    C  CI     E H    +C  C  +V  K 
Sbjct: 1   MAKRLQAELSCPVCLDFFSCSISLSCTHVFCFDCIQRYILENHDFRAMCPLCRDVV--KV 58

Query: 89  KIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVR 148
                 Q+  L    K+   +L++ L +   +R F+ D+TLDA TA++ L+ S+DLRS +
Sbjct: 59  PALEEWQVSVLTLMTKQHNSRLEQSLHVREELRHFREDVTLDAATASSLLVFSNDLRSAQ 118

Query: 149 SGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQ 208
             +I     DL +   ++ C+LG+P F+ G+H WEV+VG    W LGVC+E   RK    
Sbjct: 119 CKKIHH---DLTKDPRLA-CVLGTPCFSSGQHYWEVEVGEVKSWSLGVCKEPADRKSN-D 173

Query: 209 LTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVY 268
           L  E GFW +S++  G + A T  L  +    +L+RVGIFLD  ++ + FFD ++   +Y
Sbjct: 174 LFPEHGFW-ISMK-AGAIHANT-HLERIPASPRLRRVGIFLDADLEEIQFFDVDNNVLIY 230

Query: 269 TFRSVSAEEPLRPFLAPSVPPNGDQG-VLSICP 300
           T     + E L PF    +   G+ G VL+ICP
Sbjct: 231 THDGFFSLELLCPFFCLELLGEGESGNVLTICP 263


>gi|4557743 Mediterranean fever protein [Homo sapiens]
          Length = 781

 Score =  145 bits (367), Expect = 4e-35
 Identities = 75/182 (41%), Positives = 107/182 (58%), Gaps = 1/182 (0%)

Query: 125 VDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEV 184
           V++ LDA TA   L+ SDDL+SVR G   +   D  +RFD  + +LGSP F  GR  WEV
Sbjct: 598 VNVILDAETAYPNLIFSDDLKSVRLGNKWERLPDGPQRFDSCIIVLGSPSFLSGRRYWEV 657

Query: 185 DVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQR 244
           +VG  T W LG C+ S+ RKG + L+ E G+W V +       A++VP T L +    +R
Sbjct: 658 EVGDKTAWILGACKTSISRKGNMTLSPENGYWVVIMMKENEYQASSVPPTRLLIKEPPKR 717

Query: 245 VGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNG-DQGVLSICPLMN 303
           VGIF+D  + ++SF++  + SH+YTF S S   PL+P  +P     G +   L+ICP+  
Sbjct: 718 VGIFVDYRVGSISFYNVTARSHIYTFASCSFSGPLQPIFSPGTRDGGKNTAPLTICPVGG 777

Query: 304 SG 305
            G
Sbjct: 778 QG 779


>gi|222418658 butyrophilin, subfamily 3, member A1 isoform c [Homo
           sapiens]
          Length = 461

 Score =  145 bits (366), Expect = 5e-35
 Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 5/176 (2%)

Query: 126 DMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVD 185
           D+ LD  TAN  LL+S+D RSV+  +  Q+  D  ERF+   C+LG   F  GRH WEV+
Sbjct: 289 DVILDPKTANPILLVSEDQRSVQRAKEPQDLPDNPERFNWHYCVLGCESFISGRHYWEVE 348

Query: 186 VGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRV 245
           VG   EW +GVC ++V RKG +++T E GFWT+ L DG +    T P T L + +  ++V
Sbjct: 349 VGDRKEWHIGVCSKNVQRKGWVKMTPENGFWTMGLTDGNKYRTLTEPRTNLKLPKPPKKV 408

Query: 246 GIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSVPPNGDQGVLSICP 300
           G+FLD    ++SF++A  GSH++TF  VS  E L P F   ++ P      L+ICP
Sbjct: 409 GVFLDYETGDISFYNAVDGSHIHTFLDVSFSEALYPVFRILTLEPT----ALTICP 460


>gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo
           sapiens]
          Length = 513

 Score =  145 bits (366), Expect = 5e-35
 Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 5/176 (2%)

Query: 126 DMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVD 185
           D+ LD  TAN  LL+S+D RSV+  +  Q+  D  ERF+   C+LG   F  GRH WEV+
Sbjct: 341 DVILDPKTANPILLVSEDQRSVQRAKEPQDLPDNPERFNWHYCVLGCESFISGRHYWEVE 400

Query: 186 VGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRV 245
           VG   EW +GVC ++V RKG +++T E GFWT+ L DG +    T P T L + +  ++V
Sbjct: 401 VGDRKEWHIGVCSKNVQRKGWVKMTPENGFWTMGLTDGNKYRTLTEPRTNLKLPKPPKKV 460

Query: 246 GIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSVPPNGDQGVLSICP 300
           G+FLD    ++SF++A  GSH++TF  VS  E L P F   ++ P      L+ICP
Sbjct: 461 GVFLDYETGDISFYNAVDGSHIHTFLDVSFSEALYPVFRILTLEPT----ALTICP 512


>gi|31542779 tripartite motif family-like 1 [Homo sapiens]
          Length = 468

 Score =  141 bits (356), Expect = 7e-34
 Identities = 81/222 (36%), Positives = 122/222 (54%), Gaps = 2/222 (0%)

Query: 82  SMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLIS 141
           S+   +  + R+  L          E  L +I  M   +RKF  ++TLD  TAN +L++S
Sbjct: 243 SLEEVRGALERSEPLLLQCPEATTTELSLCRITGMKEMLRKFSTEITLDPATANAYLVLS 302

Query: 142 DDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESV 201
           +DL+SV+ G  RQ   D  ERFD S  +LG+  FT GRH WEV+VG  TEW++G+C++SV
Sbjct: 303 EDLKSVKYGGSRQQLPDNPERFDQSATVLGTQIFTSGRHYWEVEVGNKTEWEVGICKDSV 362

Query: 202 HRKGRIQLTTELGFWTVSLRDGGRLSA-TTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFD 260
            RKG +       F  + L+ G   S   + PL    V   + +VG+FLD    +++F++
Sbjct: 363 SRKGNLPKPPGDLFSLIGLKIGDDYSLWVSSPLKGQHVREPVCKVGVFLDYESGHIAFYN 422

Query: 261 AESGSHVYTFRSVSAEEPLRPFLAPSVPPNG-DQGVLSICPL 301
               S +Y+F   S +E LRP  +P +P  G +   L+IC L
Sbjct: 423 GTDESLIYSFPQASFQEALRPIFSPCLPNEGTNTDPLTICSL 464



 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 29  DMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKN 88
           D+    +E  +C +C DY   P++ ECG + CL C+    +E H   L C          
Sbjct: 5   DLMENLREELTCFICLDYFSSPVTTECGHSFCLVCLLRSWEE-HNTPLSCPECWRTLEGP 63

Query: 89  KIRRNRQLERLASHIKELEPKL 110
             + N +L RLAS  ++L  ++
Sbjct: 64  HFQSNERLGRLASIARQLRSQV 85


>gi|15208660 tripartite motif protein 21 [Homo sapiens]
          Length = 475

 Score =  140 bits (354), Expect = 1e-33
 Identities = 88/224 (39%), Positives = 129/224 (57%), Gaps = 11/224 (4%)

Query: 96  LERLAS-HIKELE---PKLKKILQ---MNPRMRKFQVDMTLDANTANNFLLISDDLRSVR 148
           LER  S ++K+L+   P+L+ +     +   +R   V +TLD +TAN +L++S+D R VR
Sbjct: 251 LERSESWNLKDLDITSPELRSVCHVPGLKKMLRTCAVHITLDPDTANPWLILSEDRRQVR 310

Query: 149 SGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQ 208
            G  +Q+     ERFD    +LG+  F  G+H WEVDV     WDLGVCR+SV RKG   
Sbjct: 311 LGDTQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVDVTGKEAWDLGVCRDSVRRKGHFL 370

Query: 209 LTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFD-AESGSHV 267
           L+++ GFWT+ L +  +  A T P T L +     +VGIFLD     VSF++  + GS +
Sbjct: 371 LSSKSGFWTIWLWNKQKYEAGTYPQTPLHLQVPPCQVGIFLDYEAGMVSFYNITDHGSLI 430

Query: 268 YTFRSVSAEEPLRPFLAPSVPPNG-DQGVLSICPLM--NSGTTD 308
           Y+F   +   PLRPF +P     G +   L++CPL   + G+TD
Sbjct: 431 YSFSECAFTGPLRPFFSPGFNDGGKNTAPLTLCPLNIGSQGSTD 474



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 36  EASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQ 95
           E  +CP+C D   +P+S+ECG + C +CI+ + K   G  +   C      KN +R NRQ
Sbjct: 12  EEVTCPICLDPFVEPVSIECGHSFCQECISQVGK--GGGSVCPVCRQRFLLKN-LRPNRQ 68

Query: 96  LERLASHIKELEPKLKK 112
           L  + +++KE+  + ++
Sbjct: 69  LANMVNNLKEISQEARE 85


>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
          Length = 526

 Score =  134 bits (338), Expect = 8e-32
 Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 4/177 (2%)

Query: 125 VDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEV 184
           VD+TLD +TA+  L + +D +SVR    RQ   +  ERFD   C+LG   FT GRH WEV
Sbjct: 303 VDVTLDPDTAHPHLFLYEDSKSVRLEDSRQKLPEKTERFDSWPCVLGRETFTSGRHYWEV 362

Query: 185 DVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQR 244
           +VG  T+W +GVCRE+V +KG   +T E GFW V L   G  + T +  T L +    +R
Sbjct: 363 EVGDRTDWAIGVCRENVMKKGFDPMTPENGFWAVELYGNGYWALTPL-RTPLPLAGPPRR 421

Query: 245 VGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPL 301
           VGIFLD    ++SF++   GS +YTF +V+   PLRPF       +  +  L+ICP+
Sbjct: 422 VGIFLDYESGDISFYNMNDGSDIYTFSNVTFSGPLRPFFCLW---SSGKKPLTICPI 475


>gi|31881693 butyrophilin, subfamily 2, member A2 isoform b [Homo
           sapiens]
          Length = 407

 Score =  134 bits (338), Expect = 8e-32
 Identities = 81/228 (35%), Positives = 117/228 (51%), Gaps = 8/228 (3%)

Query: 79  CCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFL 138
           CC   + R+ KI    +  ++    KE+  +L++ L+   R      D+ LD +TA+  L
Sbjct: 168 CCIKKLQREKKILSGEK--KVEQEEKEIAQQLQEELRWR-RTFLHAADVVLDPDTAHPEL 224

Query: 139 LISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCR 198
            +S+D RSVR G  RQ   D  ERFD   C+LG   F  G+H WEV+V     W +GVCR
Sbjct: 225 FLSEDRRSVRRGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWTVGVCR 284

Query: 199 ESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSF 258
            SV RKG + L  + GFWT+ +  G +  A + P   L +   L RVG+FLD    +VSF
Sbjct: 285 HSVERKGEVLLIPQNGFWTLEM-FGNQYRALSSPERILPLKESLCRVGVFLDYEAGDVSF 343

Query: 259 FDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGT 306
           ++    SH+YT    +   P+RPF         D   + ICP +   +
Sbjct: 344 YNMRDRSHIYTCPRSAFTVPVRPFFR----LGSDDSPIFICPALTGAS 387


>gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo
           sapiens]
          Length = 523

 Score =  134 bits (338), Expect = 8e-32
 Identities = 81/228 (35%), Positives = 117/228 (51%), Gaps = 8/228 (3%)

Query: 79  CCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFL 138
           CC   + R+ KI    +  ++    KE+  +L++ L+   R      D+ LD +TA+  L
Sbjct: 284 CCIKKLQREKKILSGEK--KVEQEEKEIAQQLQEELRWR-RTFLHAADVVLDPDTAHPEL 340

Query: 139 LISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCR 198
            +S+D RSVR G  RQ   D  ERFD   C+LG   F  G+H WEV+V     W +GVCR
Sbjct: 341 FLSEDRRSVRRGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWTVGVCR 400

Query: 199 ESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSF 258
            SV RKG + L  + GFWT+ +  G +  A + P   L +   L RVG+FLD    +VSF
Sbjct: 401 HSVERKGEVLLIPQNGFWTLEM-FGNQYRALSSPERILPLKESLCRVGVFLDYEAGDVSF 459

Query: 259 FDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGT 306
           ++    SH+YT    +   P+RPF         D   + ICP +   +
Sbjct: 460 YNMRDRSHIYTCPRSAFTVPVRPFFR----LGSDDSPIFICPALTGAS 503


>gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precursor
           [Homo sapiens]
          Length = 527

 Score =  134 bits (337), Expect = 1e-31
 Identities = 90/251 (35%), Positives = 130/251 (51%), Gaps = 16/251 (6%)

Query: 58  AVCLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMN 117
           AVC+  IN LQKE      +        R+ +    ++LE+     KE E ++K+ LQ  
Sbjct: 263 AVCIYWINKLQKEKK----ILSGEKEFERETREIALKELEKERVQ-KEEELQVKEKLQEE 317

Query: 118 PRMRK---FQVDMTLDANTANNFLLISDDLRSVRSGRIR---QNRQDLAERFDVSVCILG 171
            R R+     VD+ LD +TA+  L +S+D RSVR    R   ++  D  ERFD   C+LG
Sbjct: 318 LRWRRTFLHAVDVVLDPDTAHPDLFLSEDRRSVRRCPFRHLGESVPDNPERFDSQPCVLG 377

Query: 172 SPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTV 231
              F  G+H WEV+V    EW +GVCR+SV RKG + L  + GFWT+ +   G+  A + 
Sbjct: 378 RESFASGKHYWEVEVENVIEWTVGVCRDSVERKGEVLLIPQNGFWTLEMHK-GQYRAVSS 436

Query: 232 PLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNG 291
           P   L +   L RVG+FLD    +VSF++    SH+YT    +   P+RPF         
Sbjct: 437 PDRILPLKESLCRVGVFLDYEAGDVSFYNMRDRSHIYTCPRSAFSVPVRPFFRLGC---- 492

Query: 292 DQGVLSICPLM 302
           +   + ICP +
Sbjct: 493 EDSPIFICPAL 503


>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
          Length = 468

 Score =  132 bits (333), Expect = 3e-31
 Identities = 80/192 (41%), Positives = 112/192 (58%), Gaps = 7/192 (3%)

Query: 120 MRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGR 179
           +R+F+ D+TLD +TAN  L++S+D RSV+ G +RQ   D  ERFD   C+LG  RFT GR
Sbjct: 282 LRRFRGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGR 341

Query: 180 HCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVD 239
           H WEV+VG  T W LGVCRE+V+RK + +L+   GFW +    G   +++   L  L   
Sbjct: 342 HYWEVEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFL-GSYYNSSERALAPL--R 398

Query: 240 RKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSIC 299
              +RVGIFLD    ++SF+ A  GS ++ F  +     LRP  +P    +     ++IC
Sbjct: 399 DPPRRVGIFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPL---SSSPTPMTIC 455

Query: 300 -PLMNSGTTDAP 310
            P   SG T AP
Sbjct: 456 RPKGGSGDTLAP 467



 Score = 51.6 bits (122), Expect = 9e-07
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 27  AVDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSR 86
           A D++   QE ++C +C DY   P+  +CG   C +CI     +P G      C  +  +
Sbjct: 3   APDLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSPQ 62

Query: 87  KNKIRRNRQLERLASHIKELEP 108
           +N +R NR L ++A   + L P
Sbjct: 63  RN-LRPNRPLAKMAEMARRLHP 83


>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
          Length = 488

 Score =  131 bits (330), Expect = 7e-31
 Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 8/194 (4%)

Query: 95  QLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIR- 153
           +LE+  S+       L+KIL      ++   D+TLD  TA+  L++S+D +SV+    R 
Sbjct: 283 ELEKNFSNFPRQYFALRKIL------KQLIADVTLDPETAHPNLVLSEDRKSVKFVETRL 336

Query: 154 QNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTEL 213
           ++  D   RF    C+L +  FT GRH WEV+VG  T W +GVCR+SV RKG +    E 
Sbjct: 337 RDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPET 396

Query: 214 GFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSV 273
           G+W V L +G + +ATT P T L +  K +RVGIFLD     +SF++    SH+YTF   
Sbjct: 397 GYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDT 456

Query: 274 SAEEPLRPFLAPSV 287
             E+ L P   P +
Sbjct: 457 FTEK-LWPLFYPGI 469



 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 35  QEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNR 94
           Q  +SC VC +YL++P+ +ECG   C  CI    ++    D  C      SR   +R NR
Sbjct: 24  QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVCRKTSRYRSLRPNR 82

Query: 95  QLERLASHIKELEPKLKKI 113
           QL  +    K+L+   +KI
Sbjct: 83  QLGSMVEIAKQLQAVKRKI 101


>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
          Length = 518

 Score =  131 bits (330), Expect = 7e-31
 Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 8/194 (4%)

Query: 95  QLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIR- 153
           +LE+  S+       L+KIL      ++   D+TLD  TA+  L++S+D +SV+    R 
Sbjct: 313 ELEKNFSNFPRQYFALRKIL------KQLIADVTLDPETAHPNLVLSEDRKSVKFVETRL 366

Query: 154 QNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTEL 213
           ++  D   RF    C+L +  FT GRH WEV+VG  T W +GVCR+SV RKG +    E 
Sbjct: 367 RDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPET 426

Query: 214 GFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSV 273
           G+W V L +G + +ATT P T L +  K +RVGIFLD     +SF++    SH+YTF   
Sbjct: 427 GYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDT 486

Query: 274 SAEEPLRPFLAPSV 287
             E+ L P   P +
Sbjct: 487 FTEK-LWPLFYPGI 499



 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 35  QEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNR 94
           Q  +SC VC +YL++P+ +ECG   C  CI    ++    D  C      SR   +R NR
Sbjct: 24  QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVCRKTSRYRSLRPNR 82

Query: 95  QLERLASHIKELEPKLKKI 113
           QL  +    K+L+   +KI
Sbjct: 83  QLGSMVEIAKQLQAVKRKI 101


>gi|63054855 erythroblast membrane-associated protein precursor
           [Homo sapiens]
          Length = 475

 Score =  126 bits (317), Expect = 2e-29
 Identities = 84/221 (38%), Positives = 116/221 (52%), Gaps = 6/221 (2%)

Query: 98  RLASHIKELEPKLK-KILQMNPRMRKFQ---VDMTLDANTANNFLLISDDLRSVRSGRIR 153
           +L   +K+L  +LK K    N   R+ +   V +TLD +TA+  L++S+D R VR G  R
Sbjct: 207 KLHKAVKKLRSELKLKRAAANSGWRRARLHFVAVTLDPDTAHPKLILSEDQRCVRLGDRR 266

Query: 154 QNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTEL 213
           Q   D  +RFD  V ILGS  FT G H WEV VG  T+W LGVC ESV RKG++  +   
Sbjct: 267 QPVPDNPQRFDFVVSILGSEYFTTGCHYWEVYVGDKTKWILGVCSESVSRKGKVTASPAN 326

Query: 214 GFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSV 273
           G W +    G    A T P T   +    + VGIFLD     +SF++  + SH++TF + 
Sbjct: 327 GHWLLRQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIFTF-TH 385

Query: 274 SAEEPLRPFLAPSVPPNG-DQGVLSICPLMNSGTTDAPVRP 313
           +   PLRPF  P +   G +   L IC  ++        RP
Sbjct: 386 NFSGPLRPFFEPCLHDGGKNTAPLVICSELHKSEESIVPRP 426


>gi|19923536 erythroblast membrane-associated protein precursor
           [Homo sapiens]
          Length = 475

 Score =  126 bits (317), Expect = 2e-29
 Identities = 84/221 (38%), Positives = 116/221 (52%), Gaps = 6/221 (2%)

Query: 98  RLASHIKELEPKLK-KILQMNPRMRKFQ---VDMTLDANTANNFLLISDDLRSVRSGRIR 153
           +L   +K+L  +LK K    N   R+ +   V +TLD +TA+  L++S+D R VR G  R
Sbjct: 207 KLHKAVKKLRSELKLKRAAANSGWRRARLHFVAVTLDPDTAHPKLILSEDQRCVRLGDRR 266

Query: 154 QNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTEL 213
           Q   D  +RFD  V ILGS  FT G H WEV VG  T+W LGVC ESV RKG++  +   
Sbjct: 267 QPVPDNPQRFDFVVSILGSEYFTTGCHYWEVYVGDKTKWILGVCSESVSRKGKVTASPAN 326

Query: 214 GFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSV 273
           G W +    G    A T P T   +    + VGIFLD     +SF++  + SH++TF + 
Sbjct: 327 GHWLLRQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIFTF-TH 385

Query: 274 SAEEPLRPFLAPSVPPNG-DQGVLSICPLMNSGTTDAPVRP 313
           +   PLRPF  P +   G +   L IC  ++        RP
Sbjct: 386 NFSGPLRPFFEPCLHDGGKNTAPLVICSELHKSEESIVPRP 426


>gi|5454014 tripartite motif-containing 38 [Homo sapiens]
          Length = 465

 Score =  125 bits (315), Expect = 4e-29
 Identities = 71/188 (37%), Positives = 101/188 (53%), Gaps = 6/188 (3%)

Query: 111 KKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCIL 170
           K    +   +R  QV +TLD +TA++ L++S+D R V  G  ++N+   + RF    C+L
Sbjct: 278 KLYFDVKKMLRSHQVSVTLDPDTAHHELILSEDRRQVTRGYTQENQDTSSRRFTAFPCVL 337

Query: 171 GSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATT 230
           G   FT GR  +EVDVG  T WDLGVC E+V R   ++   + GFWT+ L       A T
Sbjct: 338 GCEGFTSGRRYFEVDVGEGTGWDLGVCMENVQRGTGMKQEPQSGFWTLRLCKKKGYVALT 397

Query: 231 VPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAP----- 285
            P T L +  +   VGIFLD     VSF++  +G H++TF   S  + LRP+        
Sbjct: 398 SPPTSLHLHEQPLLVGIFLDYEAGVVSFYNGNTGCHIFTFPKASFSDTLRPYFQVYQYSP 457

Query: 286 -SVPPNGD 292
             +PP GD
Sbjct: 458 LFLPPPGD 465



 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 36  EASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDL----LCCCSSMVS-RKNKI 90
           E ++C +C   +  P+S+ CG + C  CI    K P  + L     CC         + +
Sbjct: 12  EEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHMDSL 71

Query: 91  RRNRQLERLASHIKELEPKL 110
           R N+QL  L   +KE + ++
Sbjct: 72  RPNKQLGSLIEALKETDQEM 91


>gi|37595541 tripartite motif-containing 69 isoform b [Homo sapiens]
          Length = 341

 Score =  122 bits (307), Expect = 3e-28
 Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 1/166 (0%)

Query: 127 MTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDV 186
           +TLD  TA+  L++S    SV  G I++   D  ERFD SV +LGS  FT G+  WEV+V
Sbjct: 166 LTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDDPERFDSSVAVLGSRGFTSGKWYWEVEV 225

Query: 187 GTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVG 246
              T+W +GV RES+ RKG   LT E GFW + LR+   L A  +P   L +   L +VG
Sbjct: 226 AKKTKWTVGVVRESIIRKGSCPLTPEQGFWLLRLRNQTDLKALDLPSFSLTLTNNLDKVG 285

Query: 247 IFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGD 292
           I+LD     +SF++A++ +H+YTF +   E+ L P+  P +   G+
Sbjct: 286 IYLDYEGGQLSFYNAKTMTHIYTFSNTFMEK-LYPYFCPCLNDGGE 330


>gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]
          Length = 500

 Score =  122 bits (307), Expect = 3e-28
 Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 1/166 (0%)

Query: 127 MTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDV 186
           +TLD  TA+  L++S    SV  G I++   D  ERFD SV +LGS  FT G+  WEV+V
Sbjct: 325 LTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDDPERFDSSVAVLGSRGFTSGKWYWEVEV 384

Query: 187 GTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVG 246
              T+W +GV RES+ RKG   LT E GFW + LR+   L A  +P   L +   L +VG
Sbjct: 385 AKKTKWTVGVVRESIIRKGSCPLTPEQGFWLLRLRNQTDLKALDLPSFSLTLTNNLDKVG 444

Query: 247 IFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGD 292
           I+LD     +SF++A++ +H+YTF +   E+ L P+  P +   G+
Sbjct: 445 IYLDYEGGQLSFYNAKTMTHIYTFSNTFMEK-LYPYFCPCLNDGGE 489



 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 14/116 (12%)

Query: 40  CPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERL 99
           CP+C+D+   P+ L CG   C  CI    +    ++  C    M+ + N    N  L++L
Sbjct: 41  CPLCNDWFRDPLMLSCGHNFCEACIQDFWR-LQAKETFCPECKMLCQYNNCTFNPVLDKL 99

Query: 100 ASHIKELE------------PKLKKILQMNPRMRKFQV-DMTLDANTANNFLLISD 142
              IK+L               LK   + + ++  FQ  D  L    +  FL ISD
Sbjct: 100 VEKIKKLPLLKGHPQCPEHGENLKLFSKPDGKLICFQCKDARLSVGQSKEFLQISD 155


>gi|37622899 ring finger protein 137 [Homo sapiens]
          Length = 485

 Score =  119 bits (297), Expect = 5e-27
 Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 4/193 (2%)

Query: 112 KILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILG 171
           ++L +   ++ +  D+ LD +TA + L++S+D + V  G   Q   D  ERF     +LG
Sbjct: 290 RVLGLREILKTYAADVRLDPDTAYSRLIVSEDRKRVHYGDTNQKLPDNPERFYRYNIVLG 349

Query: 172 SPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTV 231
           S   + GRH WEV+VG  +EW LGVC+++V RK  + L+   GFW + LR G    A T 
Sbjct: 350 SQCISSGRHYWEVEVGDRSEWGLGVCKQNVDRKEVVYLSPHYGFWVIRLRKGNEYRAGTD 409

Query: 232 PLTFLFVDRKLQRVGIFLDMGMQNVSFFD-AESGSHVYTFRSVSAEEPLRPFLAP--SVP 288
               L +    +RVGIF+D    ++SF++  + GSH++TF        L P+ +P  S+ 
Sbjct: 410 EYPILSLPVPPRRVGIFVDYEAHDISFYNVTDCGSHIFTFPRYPFPGRLLPYFSPCYSIG 469

Query: 289 PNGDQGVLSICPL 301
            N +   L+IC L
Sbjct: 470 TN-NTAPLAICSL 481



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)

Query: 36  EASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGED----LLC-CCSSMVSRKNKI 90
           E  +CP+C  +L +PMS++CG + C  C++ L + P GE       C  C + V  +N +
Sbjct: 12  EEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIP-GESQNWGYTCPLCRAPVQPRN-L 69

Query: 91  RRNRQLERLASHIKEL 106
           R N QL  +   ++ L
Sbjct: 70  RPNWQLANVVEKVRLL 85


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.136    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,097,391
Number of Sequences: 37866
Number of extensions: 526202
Number of successful extensions: 1889
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1469
Number of HSP's gapped (non-prelim): 297
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press