Guide to the Human Genome
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Name: ZNF793 Sequence: fasta or formatted (406aa) NCBI GI: 148727278
Description:

zinc finger protein 793

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         18           2
 C cysteine            5.7         23           1
 D aspartate           2.5         10           1
 E glutamate           7.1         29           2
 F phenylalanine       4.2         17           2
 G glycine             6.9         28           1
 H histidine           4.9         20           1
 I isoleucine          4.2         17           2
 K lysine              9.6         39           2
 L leucine             6.2         25           2
 M methionine          1.2          5           1
 N asparagine          4.9         20           1
 P proline             5.4         22           2
 Q glutamine           4.2         17           1
 R arginine            7.6         31           2
 S serine              6.9         28           2
 T threonine           4.7         19           1
 V valine              3.9         16           3
 W tryptophan          1.5          6           1
 Y tyrosine            3.9         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 793 
ZNF568                0.419   zinc finger protein 568 
ZNF569                0.393   zinc finger protein 569 
RBAK                  0.372   RB-associated KRAB repressor 
ZNF25                 0.366   zinc finger protein 25 
LOC100287429          0.352   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.352   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.352   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.352   zinc finger protein 84 
ZNF84                 0.352   zinc finger protein 84 
ZNF182                0.347   zinc finger protein 21 isoform 2 
ZNF182                0.347   zinc finger protein 21 isoform 1 
ZNF577                0.346   zinc finger protein 577 isoform a 
ZNF37A                0.346   zinc finger protein 37a 
ZNF37A                0.346   zinc finger protein 37a 
ZNF12                 0.340   zinc finger protein 12 isoform b 
ZIM3                  0.338   zinc finger, imprinted 3 
ZNF157                0.337   zinc finger protein 157 
ZNF485                0.337   zinc finger protein 485 
ZNF613                0.337   zinc finger protein 613 isoform 1 
ZNF334                0.336   zinc finger protein 334 isoform a 
ZNF649                0.336   zinc finger protein 649 
ZNF26                 0.336   zinc finger protein 26 
ZNF12                 0.333   zinc finger protein 12 isoform a 
ZNF268                0.331   zinc finger protein 268 
DKFZp686E2433         0.330   hypothetical protein LOC345462 
ZNF615                0.329   zinc finger protein 615 
ZNF350                0.326   zinc finger protein 350 
ZNF432                0.326   zinc finger protein 432 
ZNF454                0.325   zinc finger protein 454 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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