Guide to the Human Genome
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Name: ZNF613 Sequence: fasta or formatted (617aa) NCBI GI: 72534736
Description:

zinc finger protein 613 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [581aa] zinc finger protein 613 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         24           2
 C cysteine            5.5         34           1
 D aspartate           3.2         20           1
 E glutamate           6.6         41           2
 F phenylalanine       3.7         23           1
 G glycine             7.1         44           2
 H histidine           7.0         43           1
 I isoleucine          4.7         29           2
 K lysine              9.7         60           2
 L leucine             6.3         39           2
 M methionine          1.1          7           1
 N asparagine          5.2         32           2
 P proline             3.1         19           1
 Q glutamine           5.8         36           1
 R arginine            5.3         33           2
 S serine              8.4         52           2
 T threonine           5.5         34           1
 V valine              4.5         28           1
 W tryptophan          0.8          5           1
 Y tyrosine            2.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 613 isoform 1 
ZNF613                0.942   zinc finger protein 613 isoform 2 
ZNF615                0.543   zinc finger protein 615 
ZNF614                0.532   zinc finger protein 614 
ZNF432                0.527   zinc finger protein 432 
ZNF649                0.428   zinc finger protein 649 
LOC100287429          0.423   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.423   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.423   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.423   zinc finger protein 84 
ZNF84                 0.423   zinc finger protein 84 
ZNF350                0.421   zinc finger protein 350 
ZNF300                0.413   zinc finger protein 300 
ZNF268                0.410   zinc finger protein 268 
ZNF630                0.410   zinc finger protein 630 
ZNF569                0.403   zinc finger protein 569 
ZNF568                0.402   zinc finger protein 568 
ZNF182                0.392   zinc finger protein 21 isoform 2 
ZNF182                0.390   zinc finger protein 21 isoform 1 
ZNF26                 0.382   zinc finger protein 26 
ZNF605                0.380   zinc finger protein 605 
LOC100287515          0.376   PREDICTED: hypothetical protein XP_002343928 
ZNF674                0.376   zinc finger family member 674 isoform 1 
ZNF674                0.374   zinc finger family member 674 isoform 2 
ZNF41                 0.372   zinc finger protein 41 
ZNF41                 0.372   zinc finger protein 41 
ZNF12                 0.365   zinc finger protein 12 isoform a 
ZNF585B               0.365   zinc finger protein 585B 
ZNF287                0.358   zinc finger protein 287 
ZNF665                0.356   zinc finger protein 665 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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