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Search of human proteins with 148664222
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148664222 Yip1 domain family, member 7 [Homo sapiens]
(280 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148664222 Yip1 domain family, member 7 [Homo sapiens] 563 e-161
gi|68226422 Yip1 domain family, member 5 [Homo sapiens] 315 3e-86
gi|32401427 Yip1 domain family, member 5 [Homo sapiens] 315 3e-86
gi|14150076 Yip1 domain family, member 4 [Homo sapiens] 61 1e-09
gi|28603852 Yip1 domain family, member 6 [Homo sapiens] 44 2e-04
gi|7706595 myozenin 2 [Homo sapiens] 35 0.056
gi|73476377 LBXCOR1 homolog [Homo sapiens] 33 0.21
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ... 31 1.1
gi|118766339 thyroid transcription factor 1 isoform 1 [Homo sapi... 30 3.1
gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens] 30 3.1
gi|21361794 TIP120 protein [Homo sapiens] 30 3.1
gi|12056971 anaphase promoting complex subunit 1 [Homo sapiens] 30 3.1
gi|33286444 mastermind-like 2 [Homo sapiens] 29 4.0
gi|187761334 hypothetical protein LOC57828 [Homo sapiens] 28 6.8
gi|34734079 frizzled 6 [Homo sapiens] 28 6.8
gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sap... 28 8.9
gi|216547942 solute carrier family 35, member B3 [Homo sapiens] 28 8.9
gi|216547920 solute carrier family 35, member B3 [Homo sapiens] 28 8.9
gi|21361503 solute carrier family 35, member B3 [Homo sapiens] 28 8.9
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 28 8.9
>gi|148664222 Yip1 domain family, member 7 [Homo sapiens]
Length = 280
Score = 563 bits (1450), Expect = e-161
Identities = 280/280 (100%), Positives = 280/280 (100%)
Query: 1 MDLLKISHTKLHLLEDLSIKNKQRMSNLAQFDSDFYQSNFTIDNQEQSGNDSNAYGNLYG 60
MDLLKISHTKLHLLEDLSIKNKQRMSNLAQFDSDFYQSNFTIDNQEQSGNDSNAYGNLYG
Sbjct: 1 MDLLKISHTKLHLLEDLSIKNKQRMSNLAQFDSDFYQSNFTIDNQEQSGNDSNAYGNLYG 60
Query: 61 SRKQQAGEQPQPASFVPSEMLMSSGYAGQFFQPASNSDYYSQSPYIDSFDEEPPLLEELG 120
SRKQQAGEQPQPASFVPSEMLMSSGYAGQFFQPASNSDYYSQSPYIDSFDEEPPLLEELG
Sbjct: 61 SRKQQAGEQPQPASFVPSEMLMSSGYAGQFFQPASNSDYYSQSPYIDSFDEEPPLLEELG 120
Query: 121 IHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATLLLAGKVQFGYVYGMSA 180
IHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATLLLAGKVQFGYVYGMSA
Sbjct: 121 IHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATLLLAGKVQFGYVYGMSA 180
Query: 181 IGCLVIHALLNLMSSSGVSYGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVIIG 240
IGCLVIHALLNLMSSSGVSYGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVIIG
Sbjct: 181 IGCLVIHALLNLMSSSGVSYGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVIIG 240
Query: 241 WCSLSASKIFIAALHMEGQQLLVAYPCAILYGLFALLTIF 280
WCSLSASKIFIAALHMEGQQLLVAYPCAILYGLFALLTIF
Sbjct: 241 WCSLSASKIFIAALHMEGQQLLVAYPCAILYGLFALLTIF 280
>gi|68226422 Yip1 domain family, member 5 [Homo sapiens]
Length = 257
Score = 315 bits (807), Expect = 3e-86
Identities = 160/259 (61%), Positives = 198/259 (76%), Gaps = 5/259 (1%)
Query: 25 MSNLAQFDSDFYQSNFTIDNQEQSGNDSNAYGNLYGSRKQQAG-EQPQPASFVPSEMLM- 82
MS ++DFYQ++++ID+Q Q D G Y KQ AG + Q FVP +M+
Sbjct: 1 MSGFENLNTDFYQTSYSIDDQSQQSYDYGGSGGPYS--KQYAGYDYSQQGRFVPPDMMQP 58
Query: 83 SSGYAGQFFQPASNSDYYSQSP-YIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVD 141
Y GQ +QP S P Y ++F++EPPLLEELGI+FDHIWQKTLTVL+P+K D
Sbjct: 59 QQPYTGQIYQPTQAYTPASPQPFYGNNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVAD 118
Query: 142 GSIMNETDLTGPILFCVALGATLLLAGKVQFGYVYGMSAIGCLVIHALLNLMSSSGVSYG 201
GSIMNETDL GP++FC+A GATLLLAGK+QFGYVYG+SAIGCL + LLNLMS +GVS+G
Sbjct: 119 GSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFG 178
Query: 202 CVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVIIGWCSLSASKIFIAALHMEGQQL 261
CVASVLGYCLLPM++LS A+ FSLQG+ GI+ + IIGWCS SASKIFI+AL MEGQQL
Sbjct: 179 CVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQL 238
Query: 262 LVAYPCAILYGLFALLTIF 280
LVAYPCA+LYG+FAL+++F
Sbjct: 239 LVAYPCALLYGVFALISVF 257
>gi|32401427 Yip1 domain family, member 5 [Homo sapiens]
Length = 257
Score = 315 bits (807), Expect = 3e-86
Identities = 160/259 (61%), Positives = 198/259 (76%), Gaps = 5/259 (1%)
Query: 25 MSNLAQFDSDFYQSNFTIDNQEQSGNDSNAYGNLYGSRKQQAG-EQPQPASFVPSEMLM- 82
MS ++DFYQ++++ID+Q Q D G Y KQ AG + Q FVP +M+
Sbjct: 1 MSGFENLNTDFYQTSYSIDDQSQQSYDYGGSGGPYS--KQYAGYDYSQQGRFVPPDMMQP 58
Query: 83 SSGYAGQFFQPASNSDYYSQSP-YIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVD 141
Y GQ +QP S P Y ++F++EPPLLEELGI+FDHIWQKTLTVL+P+K D
Sbjct: 59 QQPYTGQIYQPTQAYTPASPQPFYGNNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVAD 118
Query: 142 GSIMNETDLTGPILFCVALGATLLLAGKVQFGYVYGMSAIGCLVIHALLNLMSSSGVSYG 201
GSIMNETDL GP++FC+A GATLLLAGK+QFGYVYG+SAIGCL + LLNLMS +GVS+G
Sbjct: 119 GSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVSFG 178
Query: 202 CVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVIIGWCSLSASKIFIAALHMEGQQL 261
CVASVLGYCLLPM++LS A+ FSLQG+ GI+ + IIGWCS SASKIFI+AL MEGQQL
Sbjct: 179 CVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQL 238
Query: 262 LVAYPCAILYGLFALLTIF 280
LVAYPCA+LYG+FAL+++F
Sbjct: 239 LVAYPCALLYGVFALISVF 257
>gi|14150076 Yip1 domain family, member 4 [Homo sapiens]
Length = 244
Score = 60.8 bits (146), Expect = 1e-09
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 18/203 (8%)
Query: 88 GQFFQPASNSDYYSQSPY---IDSFDEEP----PLLEELGIHFDHIWQKTLTVLNPMKPV 140
G F + ++ + + Q Y ++ D++P PLLEEL I I+ K VL PM +
Sbjct: 43 GDFIKESTATTFLRQRGYGWLLEVEDDDPEDNKPLLEELDIDLKDIYYKIRCVLMPMPSL 102
Query: 141 DGS---IMNETDLTGPILFCVALGATLLLAGKVQFGYVYGMSAIGCLVIHALLNLMSSSG 197
+ + + D GP+ + L ++ + G L I L ++
Sbjct: 103 GFNRQVVRDNPDFWGPLAVVLFFSMISLYGQFRVVSWIITIWIFGSLTIFLLARVLGGE- 161
Query: 198 VSYGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVI---IGWCSLSASKIFIAAL 254
V+YG V V+GY LLP++++ A + G F ++S+L+ + W + SA+ + +
Sbjct: 162 VAYGQVLGVIGYSLLPLIVI---APVLLVVGSFEVVSTLIKLFGVFWAAYSAASLLVGEE 218
Query: 255 HMEGQQLLVAYPCAILYGLFALL 277
+ LL+ YP +LY F L
Sbjct: 219 FKTKKPLLI-YPIFLLYIYFLSL 240
>gi|28603852 Yip1 domain family, member 6 [Homo sapiens]
Length = 236
Score = 43.9 bits (102), Expect = 2e-04
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 126 IWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATLL-------LAGKVQFGYVYGM 178
+ +K + VL P K +++ + DL GP++ CV L L G QF V+ +
Sbjct: 69 VGKKFMHVLYPRK--SNTLLRDWDLWGPLILCVTLALMLQRDSADSEKDGGPQFAEVFVI 126
Query: 179 SAIGCLVIHALLNLMSSSGVSYGCVASVLGYCLLPM-VILSGCAMFF-----SLQGIFGI 232
G + I L + + +S+ VLGYC+LP+ V + C + + + +
Sbjct: 127 VWFGAVTI-TLNSKLLGGNISFFQSLCVLGYCILPLTVAMLICRLVLLADPGPVNFMVRL 185
Query: 233 MSSLVIIGWCSLSASKIFIAALHMEGQQLLVAYPCAILY 271
+V+ W S+ AS +A ++ L YP + Y
Sbjct: 186 FVVIVMFAW-SIVASTALLADSQPPNRRALAVYPVFLFY 223
>gi|7706595 myozenin 2 [Homo sapiens]
Length = 264
Score = 35.4 bits (80), Expect = 0.056
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 1 MDL-LKISHTKLHLLEDLS---------IKNKQRMSNLAQFDSDFYQSNFTIDNQEQSGN 50
MDL K+S + +LE+LS K +QR S+ F++ YQS I++ N
Sbjct: 30 MDLGKKVSIPRDIMLEELSHLSNRGARLFKMRQRRSDKYTFENFQYQSRAQINHSIAMQN 89
Query: 51 DSNAYGNLYGSRKQ---QAGEQPQPASFVPSEMLMSSGYAG-------QFFQPASNSDYY 100
NL G +Q P P S P+ ++ GY+G + F + YY
Sbjct: 90 GKVDGSNLEGGSQQAPLTPPNTPDPRS-PPNPDNIAPGYSGPLKEIPPEKFNTTAVPKYY 148
Query: 101 SQSPYIDSFDEEPPLLEEL 119
QSP+ + +P LLE L
Sbjct: 149 -QSPWEQAISNDPELLEAL 166
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 33.5 bits (75), Expect = 0.21
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 51 DSNAYGNLYGSRKQQAGEQPQPASFVPSEMLMSSGYAGQFFQPASNSDYYSQSPYIDSFD 110
D+ + LYGS ++ G P P S GY F +S Y S SP +D+ D
Sbjct: 557 DTESIAKLYGSAREAYGAGPARG---PGPGAGSGGYVSPDFLSEGSSSYNSASPDVDTAD 613
Query: 111 E 111
E
Sbjct: 614 E 614
>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 [Homo
sapiens]
Length = 1585
Score = 31.2 bits (69), Expect = 1.1
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 86 YAGQFFQPASNSDYYSQSPYIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIM 145
+ GQ S+ S+ + F E L +++ I HIW ++ PM G M
Sbjct: 1276 HMGQLLYQLVQSEKLSKQDFFKGFSETLELADDMAIDIPHIWLYLAELVTPMLKEGGISM 1335
Query: 146 NE 147
E
Sbjct: 1336 RE 1337
>gi|118766339 thyroid transcription factor 1 isoform 1 [Homo
sapiens]
Length = 401
Score = 29.6 bits (65), Expect = 3.1
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 47 QSGNDSNAYGNLYGSRKQQAGEQPQPASFVPSEMLMSSGYAGQFFQPASNSDYYSQSPYI 106
Q+G + +L G +QQA Q Q A + + + SG AG P QSP +
Sbjct: 301 QAGAPAPGAASLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAGQSPDL 360
Query: 107 DSFDEEPPLLE 117
P L+
Sbjct: 361 AHHAASPAALQ 371
>gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens]
Length = 371
Score = 29.6 bits (65), Expect = 3.1
Identities = 20/71 (28%), Positives = 29/71 (40%)
Query: 47 QSGNDSNAYGNLYGSRKQQAGEQPQPASFVPSEMLMSSGYAGQFFQPASNSDYYSQSPYI 106
Q+G + +L G +QQA Q Q A + + + SG AG P QSP +
Sbjct: 271 QAGAPAPGAASLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPGHQPGSAGQSPDL 330
Query: 107 DSFDEEPPLLE 117
P L+
Sbjct: 331 AHHAASPAALQ 341
>gi|21361794 TIP120 protein [Homo sapiens]
Length = 1230
Score = 29.6 bits (65), Expect = 3.1
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
Query: 110 DEEPPLLEELGIHFDHIWQKTLTVLNPMKP-----VDGSIMNETD--LTGPILFCVALGA 162
DE PPL+ E +H + LT L + P + GSI+NE + P+L AL A
Sbjct: 695 DELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSA 754
Query: 163 ------TLLLAGKVQFGYV 175
L++ G GY+
Sbjct: 755 MLDFFQALVVTGTNNLGYM 773
>gi|12056971 anaphase promoting complex subunit 1 [Homo sapiens]
Length = 1944
Score = 29.6 bits (65), Expect = 3.1
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 93 PASNSDYYSQSPYIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIMNETDLTG 152
P SNS+ +P E P++ EL I DH+W +T+T + + +DL G
Sbjct: 387 PNSNSNGSFLAP------ETEPIVPELCI--DHLWTETITNIREKNSQASKVFITSDLCG 438
Query: 153 PILFCVALGATLLL 166
C + + L L
Sbjct: 439 QKFLCFLVESQLQL 452
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 29.3 bits (64), Expect = 4.0
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 20 KNKQRMSNLAQFDSDFYQSNFTIDNQEQSGNDSNAYGNLYGSRKQQAGEQP--QPASFVP 77
+ +Q+ S+++ QS+ + Q+Q ++QQ +QP QPA +P
Sbjct: 616 QQQQQQSSISAQQQQQQQSSISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLP 675
Query: 78 SEMLMSS 84
S+ L+ S
Sbjct: 676 SQPLLRS 682
>gi|187761334 hypothetical protein LOC57828 [Homo sapiens]
Length = 1159
Score = 28.5 bits (62), Expect = 6.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 188 ALLNLMSSSGVSYGCVASVLGYCLLPMVILSGCAM 222
AL +M S+ V G V + +CLL +++ GC M
Sbjct: 1066 ALFIIMVSASVFVGLVIFYIAFCLLWPLVVKGCTM 1100
>gi|34734079 frizzled 6 [Homo sapiens]
Length = 706
Score = 28.5 bits (62), Expect = 6.8
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 153 PILFCVALGATLLLAGKVQFGYVYGMSAIGCLVIHALLNLMSSSGVSYGCVASVLGYCLL 212
P+ CV +G +LLLAG + +V + L M GV G L+
Sbjct: 374 PLCLCVFVGLSLLLAGIISLNHVRQVIQHDGRNQEKLKKFMIRIGV-------FSGLYLV 426
Query: 213 PMVILSGCAMF 223
P+V L GC ++
Sbjct: 427 PLVTLLGCYVY 437
>gi|239050813 lipoxygenase homology domains 1 isoform 1 [Homo sapiens]
Length = 2211
Score = 28.1 bits (61), Expect = 8.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 36 YQSNFTIDNQEQSGNDSNAYGNLYGSRKQQAGEQP 70
Y+ N ++G D+N Y +YG GE+P
Sbjct: 1024 YEVQVVTGNVPKAGTDANVYLTIYGEEYGDTGERP 1058
>gi|216547942 solute carrier family 35, member B3 [Homo sapiens]
Length = 401
Score = 28.1 bits (61), Expect = 8.9
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 29/115 (25%)
Query: 141 DGSIMNETDLTGPILFCVALGATLLLAGKVQ----------------FGYVYGMSAIGCL 184
D + +LTG +L +AL A ++ G VQ + Y G
Sbjct: 217 DSTTAPNFNLTGVVLISLALCADAVI-GNVQEKAMKLHNASNSEMVLYSYSIGF------ 269
Query: 185 VIHALLNLMSSSGVSYGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVII 239
++ LL L +SG+ + +C V G A FSL G FGI L +I
Sbjct: 270 -VYILLGLTCTSGLG-----PAVTFCAKNPVRTYGYAFLFSLTGYFGISFVLALI 318
>gi|216547920 solute carrier family 35, member B3 [Homo sapiens]
Length = 401
Score = 28.1 bits (61), Expect = 8.9
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 29/115 (25%)
Query: 141 DGSIMNETDLTGPILFCVALGATLLLAGKVQ----------------FGYVYGMSAIGCL 184
D + +LTG +L +AL A ++ G VQ + Y G
Sbjct: 217 DSTTAPNFNLTGVVLISLALCADAVI-GNVQEKAMKLHNASNSEMVLYSYSIGF------ 269
Query: 185 VIHALLNLMSSSGVSYGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVII 239
++ LL L +SG+ + +C V G A FSL G FGI L +I
Sbjct: 270 -VYILLGLTCTSGLG-----PAVTFCAKNPVRTYGYAFLFSLTGYFGISFVLALI 318
>gi|21361503 solute carrier family 35, member B3 [Homo sapiens]
Length = 401
Score = 28.1 bits (61), Expect = 8.9
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 29/115 (25%)
Query: 141 DGSIMNETDLTGPILFCVALGATLLLAGKVQ----------------FGYVYGMSAIGCL 184
D + +LTG +L +AL A ++ G VQ + Y G
Sbjct: 217 DSTTAPNFNLTGVVLISLALCADAVI-GNVQEKAMKLHNASNSEMVLYSYSIGF------ 269
Query: 185 VIHALLNLMSSSGVSYGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVII 239
++ LL L +SG+ + +C V G A FSL G FGI L +I
Sbjct: 270 -VYILLGLTCTSGLG-----PAVTFCAKNPVRTYGYAFLFSLTGYFGISFVLALI 318
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 28.1 bits (61), Expect = 8.9
Identities = 30/128 (23%), Positives = 44/128 (34%), Gaps = 16/128 (12%)
Query: 15 EDLSIKNKQRMSNLAQFDSDFYQSNFTIDNQEQSGNDSNAYGNLYGSRKQQAGEQPQPAS 74
E S + R F+S+ + T N E SGN S YGS Q +P
Sbjct: 634 ESYSSPSSPRHDGRESFESEEEKDRDTDSNSEDSGNPSTTRFTGYGSVNQTVTVKP---- 689
Query: 75 FVPSEMLMSSGYAGQFFQPASNSDYYSQSPYIDSFDEEPPLLEELGIHFDHIWQKTLTVL 134
P ++ G + NS Y ++ + L + QK+ V+
Sbjct: 690 --PVQIASLGNENGNLLEDPLNSPKYQHISFMPT----------LHCVMHNGAQKSEVVV 737
Query: 135 NPMKPVDG 142
KP DG
Sbjct: 738 PAPKPADG 745
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,081,180
Number of Sequences: 37866
Number of extensions: 439836
Number of successful extensions: 1100
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1085
Number of HSP's gapped (non-prelim): 20
length of query: 280
length of database: 18,247,518
effective HSP length: 101
effective length of query: 179
effective length of database: 14,423,052
effective search space: 2581726308
effective search space used: 2581726308
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.