Guide to the Human Genome
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Name: SLC35B3 Sequence: fasta or formatted (401aa) NCBI GI: 21361503
Description:

solute carrier family 35, member B3

Referenced in:

Solute Carrier Families

Other entries for this name:
alt mRNA [401aa] solute carrier family 35, member B3
alt mRNA [401aa] solute carrier family 35, member B3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         24           2
 C cysteine            2.2          9           2
 D aspartate           2.7         11           2
 E glutamate           2.2          9           1
 F phenylalanine       7.2         29           2
 G glycine             6.7         27           2
 H histidine           0.5          2           1
 I isoleucine          8.5         34           2
 K lysine              6.2         25           1
 L leucine            11.5         46           2
 M methionine          3.0         12           1
 N asparagine          5.0         20           2
 P proline             2.5         10           1
 Q glutamine           3.7         15           2
 R arginine            2.5         10           3
 S serine              7.7         31           1
 T threonine           7.5         30           2
 V valine              8.7         35           3
 W tryptophan          0.7          3           1
 Y tyrosine            4.7         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35, member B3 
SLC35B3               1.000   solute carrier family 35, member B3 
SLC35B3               1.000   solute carrier family 35, member B3 
SLC35B1               0.118   solute carrier family 35, member B1 
SLC35B2               0.069   solute carrier family 35, member B2 
SLC35B4               0.055   solute carrier family 35, member B4 
OR5M8                 0.007   olfactory receptor, family 5, subfamily M, member 8 ...
SLC35F3               0.007   solute carrier family 35, member F3 
SLC35D3               0.005   solute carrier family 35, member D3 
NLRC3                 0.005   NOD3 protein 
SLC16A4               0.005   solute carrier family 16, member 4 
AQP6                  0.005   aquaporin 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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