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Search of human proteins with 14861838
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14861838 fetal and adult testis expressed transcript protein
[Homo sapiens]
(183 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14861838 fetal and adult testis expressed transcript protein ... 368 e-102
gi|31377607 mitochondrial fission factor [Homo sapiens] 44 6e-05
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 37 0.009
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 37 0.009
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 37 0.009
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 37 0.009
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 37 0.009
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 37 0.009
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 37 0.009
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 37 0.009
gi|222080100 BAI1-associated protein 2 isoform 4 [Homo sapiens] 33 0.14
gi|5453565 BAI1-associated protein 2 isoform 3 [Homo sapiens] 33 0.14
gi|9257197 BAI1-associated protein 2 isoform 1 [Homo sapiens] 33 0.14
gi|9257199 BAI1-associated protein 2 isoform 2 [Homo sapiens] 33 0.14
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 31 0.52
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 31 0.52
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 31 0.52
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 31 0.52
gi|196115290 glial fibrillary acidic protein isoform 2 [Homo sap... 30 1.2
gi|4503979 glial fibrillary acidic protein isoform 1 [Homo sapiens] 30 1.2
gi|167466190 forkhead box P3 isoform b [Homo sapiens] 30 1.2
gi|31982943 forkhead box P3 isoform a [Homo sapiens] 30 1.2
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 30 1.2
gi|134142826 pericentriolar material 1 [Homo sapiens] 30 1.5
gi|239755068 PREDICTED: hypothetical protein [Homo sapiens] 29 2.0
gi|239749592 PREDICTED: hypothetical protein [Homo sapiens] 29 2.0
gi|239743859 PREDICTED: hypothetical protein [Homo sapiens] 29 2.0
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 29 2.0
gi|157266264 pleckstrin homology-like domain, family B, member 3... 29 2.0
gi|51702248 G protein-coupled receptor associated sorting protei... 29 2.6
>gi|14861838 fetal and adult testis expressed transcript protein
[Homo sapiens]
Length = 183
Score = 368 bits (944), Expect = e-102
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG
Sbjct: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
Query: 61 SASAKRVWNMTATRPKKMGSQLPKPRMLRESGHGDAHLQEYAGNFQGIRFHYDRNPGTDA 120
SASAKRVWNMTATRPKKMGSQLPKPRMLRESGHGDAHLQEYAGNFQGIRFHYDRNPGTDA
Sbjct: 61 SASAKRVWNMTATRPKKMGSQLPKPRMLRESGHGDAHLQEYAGNFQGIRFHYDRNPGTDA 120
Query: 121 VAQTSLEEFNVLEMEVMRRQLYAVNRRLRALEEQGATWRHRETLIIAVLVSASIANLWLW 180
VAQTSLEEFNVLEMEVMRRQLYAVNRRLRALEEQGATWRHRETLIIAVLVSASIANLWLW
Sbjct: 121 VAQTSLEEFNVLEMEVMRRQLYAVNRRLRALEEQGATWRHRETLIIAVLVSASIANLWLW 180
Query: 181 MNQ 183
MNQ
Sbjct: 181 MNQ 183
>gi|31377607 mitochondrial fission factor [Homo sapiens]
Length = 342
Score = 44.3 bits (103), Expect = 6e-05
Identities = 19/65 (29%), Positives = 37/65 (56%)
Query: 119 DAVAQTSLEEFNVLEMEVMRRQLYAVNRRLRALEEQGATWRHRETLIIAVLVSASIANLW 178
D + + ++ V++ +RRQ+ +NRRL+ LEE+ RE ++ ++ V+ + N W
Sbjct: 278 DTTIEGTSDDLTVVDAASLRRQIIKLNRRLQLLEEENKERAKREMVMYSITVAFWLLNSW 337
Query: 179 LWMNQ 183
LW +
Sbjct: 338 LWFRR 342
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 37.0 bits (84), Expect = 0.009
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 21/181 (11%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
+A G + E L QGE Q L+ E+ L + A+QK+Q+LE + A
Sbjct: 1700 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK 1759
Query: 61 SASAKRVWNMTATRPK---KMGSQLPKPRMLRESGHGDAHLQEYAGNFQGI--RFHYDRN 115
+ V + R + + S+ K R+ E+G L E A + + R
Sbjct: 1760 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR-FRELAEEAARLRALAEEAKRQRQ 1818
Query: 116 PGTDAVAQTSLEEFNVL---------------EMEVMRRQLYAVNRRLRALEEQGATWRH 160
+ A+ E VL E E+ ++ A N RLR L E A R
Sbjct: 1819 LAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRR 1878
Query: 161 R 161
R
Sbjct: 1879 R 1879
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 37.0 bits (84), Expect = 0.009
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 21/181 (11%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
+A G + E L QGE Q L+ E+ L + A+QK+Q+LE + A
Sbjct: 1704 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK 1763
Query: 61 SASAKRVWNMTATRPK---KMGSQLPKPRMLRESGHGDAHLQEYAGNFQGI--RFHYDRN 115
+ V + R + + S+ K R+ E+G L E A + + R
Sbjct: 1764 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR-FRELAEEAARLRALAEEAKRQRQ 1822
Query: 116 PGTDAVAQTSLEEFNVL---------------EMEVMRRQLYAVNRRLRALEEQGATWRH 160
+ A+ E VL E E+ ++ A N RLR L E A R
Sbjct: 1823 LAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRR 1882
Query: 161 R 161
R
Sbjct: 1883 R 1883
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 37.0 bits (84), Expect = 0.009
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 21/181 (11%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
+A G + E L QGE Q L+ E+ L + A+QK+Q+LE + A
Sbjct: 1700 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK 1759
Query: 61 SASAKRVWNMTATRPK---KMGSQLPKPRMLRESGHGDAHLQEYAGNFQGI--RFHYDRN 115
+ V + R + + S+ K R+ E+G L E A + + R
Sbjct: 1760 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR-FRELAEEAARLRALAEEAKRQRQ 1818
Query: 116 PGTDAVAQTSLEEFNVL---------------EMEVMRRQLYAVNRRLRALEEQGATWRH 160
+ A+ E VL E E+ ++ A N RLR L E A R
Sbjct: 1819 LAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRR 1878
Query: 161 R 161
R
Sbjct: 1879 R 1879
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 37.0 bits (84), Expect = 0.009
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 21/181 (11%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
+A G + E L QGE Q L+ E+ L + A+QK+Q+LE + A
Sbjct: 1668 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK 1727
Query: 61 SASAKRVWNMTATRPK---KMGSQLPKPRMLRESGHGDAHLQEYAGNFQGI--RFHYDRN 115
+ V + R + + S+ K R+ E+G L E A + + R
Sbjct: 1728 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR-FRELAEEAARLRALAEEAKRQRQ 1786
Query: 116 PGTDAVAQTSLEEFNVL---------------EMEVMRRQLYAVNRRLRALEEQGATWRH 160
+ A+ E VL E E+ ++ A N RLR L E A R
Sbjct: 1787 LAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRR 1846
Query: 161 R 161
R
Sbjct: 1847 R 1847
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 37.0 bits (84), Expect = 0.009
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 21/181 (11%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
+A G + E L QGE Q L+ E+ L + A+QK+Q+LE + A
Sbjct: 1837 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK 1896
Query: 61 SASAKRVWNMTATRPK---KMGSQLPKPRMLRESGHGDAHLQEYAGNFQGI--RFHYDRN 115
+ V + R + + S+ K R+ E+G L E A + + R
Sbjct: 1897 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR-FRELAEEAARLRALAEEAKRQRQ 1955
Query: 116 PGTDAVAQTSLEEFNVL---------------EMEVMRRQLYAVNRRLRALEEQGATWRH 160
+ A+ E VL E E+ ++ A N RLR L E A R
Sbjct: 1956 LAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRR 2015
Query: 161 R 161
R
Sbjct: 2016 R 2016
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 37.0 bits (84), Expect = 0.009
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 21/181 (11%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
+A G + E L QGE Q L+ E+ L + A+QK+Q+LE + A
Sbjct: 1678 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK 1737
Query: 61 SASAKRVWNMTATRPK---KMGSQLPKPRMLRESGHGDAHLQEYAGNFQGI--RFHYDRN 115
+ V + R + + S+ K R+ E+G L E A + + R
Sbjct: 1738 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR-FRELAEEAARLRALAEEAKRQRQ 1796
Query: 116 PGTDAVAQTSLEEFNVL---------------EMEVMRRQLYAVNRRLRALEEQGATWRH 160
+ A+ E VL E E+ ++ A N RLR L E A R
Sbjct: 1797 LAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRR 1856
Query: 161 R 161
R
Sbjct: 1857 R 1857
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 37.0 bits (84), Expect = 0.009
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 21/181 (11%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
+A G + E L QGE Q L+ E+ L + A+QK+Q+LE + A
Sbjct: 1686 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK 1745
Query: 61 SASAKRVWNMTATRPK---KMGSQLPKPRMLRESGHGDAHLQEYAGNFQGI--RFHYDRN 115
+ V + R + + S+ K R+ E+G L E A + + R
Sbjct: 1746 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR-FRELAEEAARLRALAEEAKRQRQ 1804
Query: 116 PGTDAVAQTSLEEFNVL---------------EMEVMRRQLYAVNRRLRALEEQGATWRH 160
+ A+ E VL E E+ ++ A N RLR L E A R
Sbjct: 1805 LAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRR 1864
Query: 161 R 161
R
Sbjct: 1865 R 1865
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 37.0 bits (84), Expect = 0.009
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 21/181 (11%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
+A G + E L QGE Q L+ E+ L + A+QK+Q+LE + A
Sbjct: 1727 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK 1786
Query: 61 SASAKRVWNMTATRPK---KMGSQLPKPRMLRESGHGDAHLQEYAGNFQGI--RFHYDRN 115
+ V + R + + S+ K R+ E+G L E A + + R
Sbjct: 1787 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGR-FRELAEEAARLRALAEEAKRQRQ 1845
Query: 116 PGTDAVAQTSLEEFNVL---------------EMEVMRRQLYAVNRRLRALEEQGATWRH 160
+ A+ E VL E E+ ++ A N RLR L E A R
Sbjct: 1846 LAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRR 1905
Query: 161 R 161
R
Sbjct: 1906 R 1906
>gi|222080100 BAI1-associated protein 2 isoform 4 [Homo sapiens]
Length = 534
Score = 33.1 bits (74), Expect = 0.14
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 10 AEMEMSLAEELNHGRQGENQEHLV-IAEMMELGSRSRGASQKKQKLEQKAAGSASAKRVW 68
AE+ + +L + + E L + + +EL SR A+ KK + EQ++ G A K
Sbjct: 80 AEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQA 139
Query: 69 NMTATRPKKMGSQLPKPRMLRESGHGDA 96
+ R K GS+ P+ +E + DA
Sbjct: 140 ELKKLRKKSQGSKNPQKYSDKELQYIDA 167
>gi|5453565 BAI1-associated protein 2 isoform 3 [Homo sapiens]
Length = 520
Score = 33.1 bits (74), Expect = 0.14
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 10 AEMEMSLAEELNHGRQGENQEHLV-IAEMMELGSRSRGASQKKQKLEQKAAGSASAKRVW 68
AE+ + +L + + E L + + +EL SR A+ KK + EQ++ G A K
Sbjct: 80 AEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQA 139
Query: 69 NMTATRPKKMGSQLPKPRMLRESGHGDA 96
+ R K GS+ P+ +E + DA
Sbjct: 140 ELKKLRKKSQGSKNPQKYSDKELQYIDA 167
>gi|9257197 BAI1-associated protein 2 isoform 1 [Homo sapiens]
Length = 521
Score = 33.1 bits (74), Expect = 0.14
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 10 AEMEMSLAEELNHGRQGENQEHLV-IAEMMELGSRSRGASQKKQKLEQKAAGSASAKRVW 68
AE+ + +L + + E L + + +EL SR A+ KK + EQ++ G A K
Sbjct: 80 AEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQA 139
Query: 69 NMTATRPKKMGSQLPKPRMLRESGHGDA 96
+ R K GS+ P+ +E + DA
Sbjct: 140 ELKKLRKKSQGSKNPQKYSDKELQYIDA 167
>gi|9257199 BAI1-associated protein 2 isoform 2 [Homo sapiens]
Length = 552
Score = 33.1 bits (74), Expect = 0.14
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 10 AEMEMSLAEELNHGRQGENQEHLV-IAEMMELGSRSRGASQKKQKLEQKAAGSASAKRVW 68
AE+ + +L + + E L + + +EL SR A+ KK + EQ++ G A K
Sbjct: 80 AEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQA 139
Query: 69 NMTATRPKKMGSQLPKPRMLRESGHGDA 96
+ R K GS+ P+ +E + DA
Sbjct: 140 ELKKLRKKSQGSKNPQKYSDKELQYIDA 167
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 31.2 bits (69), Expect = 0.52
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 11 EMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLE-QKAAGSASAKRVWN 69
EME L EE + G+Q + + + +M++L + +QKL+ +K A K++ +
Sbjct: 926 EMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLED 985
Query: 70 MTATRPKKMGSQLPKPRMLRESGHGD-----AHLQEYAGNFQGIRFHYDRNPGTDAVAQT 124
+ ++L K R L E D A +E A N ++ ++ + ++ +
Sbjct: 986 EILVMDDQ-NNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHE-SMISELEVRL 1043
Query: 125 SLEEFNVLEMEVMRRQL 141
EE + E+E ++R+L
Sbjct: 1044 KKEEKSRQELEKLKRKL 1060
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 31.2 bits (69), Expect = 0.52
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 11 EMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLE-QKAAGSASAKRVWN 69
EME L EE + G+Q + + + +M++L + +QKL+ +K A K++ +
Sbjct: 933 EMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLED 992
Query: 70 MTATRPKKMGSQLPKPRMLRESGHGD-----AHLQEYAGNFQGIRFHYDRNPGTDAVAQT 124
+ ++L K R L E D A +E A N ++ ++ + ++ +
Sbjct: 993 EILVMDDQ-NNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHE-SMISELEVRL 1050
Query: 125 SLEEFNVLEMEVMRRQL 141
EE + E+E ++R+L
Sbjct: 1051 KKEEKSRQELEKLKRKL 1067
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 31.2 bits (69), Expect = 0.52
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 11 EMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLE-QKAAGSASAKRVWN 69
EME L EE + G+Q + + + +M++L + +QKL+ +K A K++ +
Sbjct: 933 EMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLED 992
Query: 70 MTATRPKKMGSQLPKPRMLRESGHGD-----AHLQEYAGNFQGIRFHYDRNPGTDAVAQT 124
+ ++L K R L E D A +E A N ++ ++ + ++ +
Sbjct: 993 EILVMDDQ-NNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHE-SMISELEVRL 1050
Query: 125 SLEEFNVLEMEVMRRQL 141
EE + E+E ++R+L
Sbjct: 1051 KKEEKSRQELEKLKRKL 1067
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 31.2 bits (69), Expect = 0.52
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 11 EMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLE-QKAAGSASAKRVWN 69
EME L EE + G+Q + + + +M++L + +QKL+ +K A K++ +
Sbjct: 926 EMEARLEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLED 985
Query: 70 MTATRPKKMGSQLPKPRMLRESGHGD-----AHLQEYAGNFQGIRFHYDRNPGTDAVAQT 124
+ ++L K R L E D A +E A N ++ ++ + ++ +
Sbjct: 986 EILVMDDQ-NNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHE-SMISELEVRL 1043
Query: 125 SLEEFNVLEMEVMRRQL 141
EE + E+E ++R+L
Sbjct: 1044 KKEEKSRQELEKLKRKL 1060
>gi|196115290 glial fibrillary acidic protein isoform 2 [Homo
sapiens]
Length = 431
Score = 30.0 bits (66), Expect = 1.2
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
+A PP ++ SLA LN G + AEMMEL R +K + LEQ+
Sbjct: 39 LARMPPPLPTRVDFSLAGALNAGFKETRASER--AEMMELNDRFASYIEKVRFLEQQ--N 94
Query: 61 SASAKRVWNMTATRPKKM 78
A A + + A P K+
Sbjct: 95 KALAAELNQLRAKEPTKL 112
>gi|4503979 glial fibrillary acidic protein isoform 1 [Homo sapiens]
Length = 432
Score = 30.0 bits (66), Expect = 1.2
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 1 MAGGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAG 60
+A PP ++ SLA LN G + AEMMEL R +K + LEQ+
Sbjct: 39 LARMPPPLPTRVDFSLAGALNAGFKETRASER--AEMMELNDRFASYIEKVRFLEQQ--N 94
Query: 61 SASAKRVWNMTATRPKKM 78
A A + + A P K+
Sbjct: 95 KALAAELNQLRAKEPTKL 112
>gi|167466190 forkhead box P3 isoform b [Homo sapiens]
Length = 396
Score = 30.0 bits (66), Expect = 1.2
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 13/155 (8%)
Query: 11 EMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAGSAS-AKRVWN 69
EM SL ++L ++ + +A M L S AS K AAGS W+
Sbjct: 202 EMVQSLEQQLVLEKEKLSAMQAHLAGKMALTKASSVASSDKGSCCIVAAGSQGPVVPAWS 261
Query: 70 MTATRPKKMGSQLPKPRMLRESGHGDAHLQEYAGNFQGIRFHYDRNPGTDAVAQTSLEEF 129
P++ L R HG++ E+ N +FH R P T A +L +
Sbjct: 262 ----GPREAPDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYA----TLIRW 313
Query: 130 NVLEMEVMRRQLYAV----NRRLRALEEQGATWRH 160
+LE +R L + R ATW++
Sbjct: 314 AILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKN 348
>gi|31982943 forkhead box P3 isoform a [Homo sapiens]
Length = 431
Score = 30.0 bits (66), Expect = 1.2
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 13/155 (8%)
Query: 11 EMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAGSAS-AKRVWN 69
EM SL ++L ++ + +A M L S AS K AAGS W+
Sbjct: 237 EMVQSLEQQLVLEKEKLSAMQAHLAGKMALTKASSVASSDKGSCCIVAAGSQGPVVPAWS 296
Query: 70 MTATRPKKMGSQLPKPRMLRESGHGDAHLQEYAGNFQGIRFHYDRNPGTDAVAQTSLEEF 129
P++ L R HG++ E+ N +FH R P T A +L +
Sbjct: 297 ----GPREAPDSLFAVRRHLWGSHGNSTFPEFLHNMDYFKFHNMRPPFTYA----TLIRW 348
Query: 130 NVLEMEVMRRQLYAV----NRRLRALEEQGATWRH 160
+LE +R L + R ATW++
Sbjct: 349 AILEAPEKQRTLNEIYHWFTRMFAFFRNHPATWKN 383
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 30.0 bits (66), Expect = 1.2
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 15 SLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAGSASAKRVWNMTATR 74
S +E GRQ E + ++RG +KK + + AAG A ++R +
Sbjct: 197 SRGDEDKKGRQREAKSRF---------GKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQK 247
Query: 75 PKKMGSQLP---KPRMLRESGHGDAHLQEYAGN 104
++ G + K R+ + G GD L+ N
Sbjct: 248 QRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQN 280
>gi|134142826 pericentriolar material 1 [Homo sapiens]
Length = 2024
Score = 29.6 bits (65), Expect = 1.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 5 PPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQ 56
P N + +SL E++ R+ E L E +EL S+ R +KKQK+++
Sbjct: 362 PDNRRQAESLSLTREVSQSRKPSASERLP-DEKVELFSKMRVLQEKKQKMDK 412
>gi|239755068 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 29.3 bits (64), Expect = 2.0
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 5 PPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAGSASA 64
PP K ++ EE G+Q E +E +V+ + + + +G ++ ++ E+KA A
Sbjct: 4 PPAQKISFVITWTEEEEEGQQQE-EELVVVLLVTKKREKEQGGKKETERKERKAVWMAEH 62
Query: 65 KRVWNMT------ATRPKKMGSQLP 83
R ++MT +T P+ + +Q P
Sbjct: 63 VR-FHMTSVPVSGSTMPRLLSAQPP 86
>gi|239749592 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 29.3 bits (64), Expect = 2.0
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 5 PPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAGSASA 64
PP K ++ EE G+Q E +E +V+ + + + +G ++ ++ E+KA A
Sbjct: 4 PPAQKISFVITWTEEEEEGQQQE-EELVVVLLVTKKREKEQGGKKETERKERKAVWMAEH 62
Query: 65 KRVWNMT------ATRPKKMGSQLP 83
R ++MT +T P+ + +Q P
Sbjct: 63 VR-FHMTSVPVSGSTMPRLLSAQPP 86
>gi|239743859 PREDICTED: hypothetical protein [Homo sapiens]
Length = 205
Score = 29.3 bits (64), Expect = 2.0
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 5 PPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAGSASA 64
PP K ++ EE G+Q E +E +V+ + + + +G ++ ++ E+KA A
Sbjct: 4 PPAQKISFVITWTEEEEEGQQQE-EELVVVLLVTKKREKEQGGKKETERKERKAVWMAEH 62
Query: 65 KRVWNMT------ATRPKKMGSQLP 83
R ++MT +T P+ + +Q P
Sbjct: 63 VR-FHMTSVPVSGSTMPRLLSAQPP 86
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 29.3 bits (64), Expect = 2.0
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 16 LAEELNHGRQGENQEHLV----------IAEMMEL-GSRSRGASQKKQKLEQKAAGSASA 64
L++EL R+ E + H + E +E G ASQ+++ L + A +
Sbjct: 765 LSKELAQARRAEAEAHREAEAQAWEQARLREAVEAAGQELESASQEREALVEALAAAGRE 824
Query: 65 KRVWNMTATRPKKMGSQLPKPRMLRESGHGDAHLQE 100
+R W +R + S+ + RM G HL+E
Sbjct: 825 RRQWEREGSRLRAQ-SEAAEERMQVLESEGRQHLEE 859
>gi|157266264 pleckstrin homology-like domain, family B, member 3
[Homo sapiens]
Length = 640
Score = 29.3 bits (64), Expect = 2.0
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 19/139 (13%)
Query: 3 GGPPNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAGSA 62
G PP E ++ + + + E + V+AE SRG ++++ + E+ GS+
Sbjct: 10 GTPPPLVPECDVEVQPQGHPEESREQEASEVLAE-----PSSRGGAEQQAEEEEVGEGSS 64
Query: 63 SAKRVWNMTATRPKKMGSQLPKPRMLRESGHGDAHLQEYAGNFQGIRFHYDRNPGTDAVA 122
+ AT P M + P RE G A QG + +A+
Sbjct: 65 TESSRDAPEATPPIAMAATPPASTSSREGVRGAAR------RLQGQQL--------EALT 110
Query: 123 QTSLEEFNVLEMEVMRRQL 141
+ +L E V E++ R++L
Sbjct: 111 RVALMEQRVKELQRQRKEL 129
>gi|51702248 G protein-coupled receptor associated sorting protein
2 [Homo sapiens]
Length = 838
Score = 28.9 bits (63), Expect = 2.6
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 6 PNTKAEMEMSLAEELNHGRQGENQEHLVIAEMMELGSRSRGASQKKQKLEQKAAGSASAK 65
P+ +A+ E EE+ G + EN LV+ + R++ + + K E K+ +A K
Sbjct: 8 PSAQAKPEKKAGEEVIAGPERENDVPLVVRPKV----RTQATTGARPKTETKSVPAARPK 63
Query: 66 -RVWNMTATRPKK----MGSQLPK 84
M+ RPK MG PK
Sbjct: 64 TEAQAMSGARPKTEVQVMGGARPK 87
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.127 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,032,534
Number of Sequences: 37866
Number of extensions: 276697
Number of successful extensions: 1082
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1038
Number of HSP's gapped (non-prelim): 72
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.