Guide to the Human Genome
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Name: ZNF419 Sequence: fasta or formatted (478aa) NCBI GI: 148612895
Description:

zinc finger protein 419 isoform 5

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [498aa] zinc finger protein 419 isoform 3
alt prot [465aa] zinc finger protein 419 isoform 6
alt prot [510aa] zinc finger protein 419 isoform 2
alt prot [497aa] zinc finger protein 419 isoform 4
alt prot [464aa] zinc finger protein 419 isoform 7
alt prot [511aa] zinc finger protein 419 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         23           4
 C cysteine            5.4         26           1
 D aspartate           1.7          8           2
 E glutamate           8.2         39           2
 F phenylalanine       5.2         25           2
 G glycine             7.1         34           1
 H histidine           7.7         37           2
 I isoleucine          2.3         11           1
 K lysine              8.4         40           2
 L leucine             7.5         36           2
 M methionine          1.5          7           1
 N asparagine          2.9         14           1
 P proline             2.9         14           1
 Q glutamine           5.6         27           2
 R arginine            7.3         35           2
 S serine              8.6         41           2
 T threonine           4.2         20           1
 V valine              5.2         25           1
 W tryptophan          0.6          3           1
 Y tyrosine            2.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 419 isoform 5 
ZNF419                0.983   zinc finger protein 419 isoform 1 
ZNF419                0.977   zinc finger protein 419 isoform 2 
ZNF419                0.965   zinc finger protein 419 isoform 6 
ZNF419                0.963   zinc finger protein 419 isoform 7 
ZNF419                0.947   zinc finger protein 419 isoform 3 
ZNF419                0.945   zinc finger protein 419 isoform 4 
ZNF773                0.737   zinc finger protein 773 
ZNF17                 0.519   zinc finger protein 17 
ZNF154                0.507   zinc finger protein 154 
ZNF211                0.502   zinc finger protein 211 isoform 1 
ZNF548                0.496   zinc finger protein 548 
ZNF418                0.491   zinc finger protein 418 
ZNF211                0.488   zinc finger protein 211 isoform 2 
ZNF304                0.486   zinc finger protein 304 
ZNF132                0.484   zinc finger protein 132 
ZNF256                0.467   zinc finger protein 256 
ZNF135                0.462   zinc finger protein 135 
ZNF551                0.455   zinc finger protein 551 
ZNF436                0.454   zinc finger protein 436 
ZNF436                0.454   zinc finger protein 436 
ZNF420                0.449   zinc finger protein 420 
ZNF347                0.449   zinc finger protein 347 
ZNF665                0.442   zinc finger protein 665 
ZNF167                0.442   zinc finger protein 167 isoform 1 
ZNF16                 0.441   zinc finger protein 16 
ZNF16                 0.441   zinc finger protein 16 
LOC647678             0.440   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.440   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.440   PREDICTED: hypothetical protein XP_002343697 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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