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Search of human proteins with 148612798
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148612798 pellino 3 alpha isoform 1 [Homo sapiens]
(469 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148612798 pellino 3 alpha isoform 1 [Homo sapiens] 990 0.0
gi|148612833 pellino 3 alpha isoform 2 [Homo sapiens] 924 0.0
gi|10864063 pellino 2 [Homo sapiens] 621 e-178
gi|11037063 pellino protein [Homo sapiens] 617 e-177
gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Hom... 37 0.050
gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Hom... 37 0.050
gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [H... 37 0.050
gi|40353769 chordin-like 2 [Homo sapiens] 34 0.25
gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo ... 33 0.56
gi|38045890 CUB and Sushi multiple domains 3 isoform 2 [Homo sap... 32 0.95
gi|205277354 CUB and Sushi multiple domains 3 isoform 3 [Homo sa... 32 0.95
gi|38045888 CUB and Sushi multiple domains 3 isoform 1 [Homo sap... 32 0.95
gi|219842266 usherin isoform B [Homo sapiens] 32 1.2
gi|239757960 PREDICTED: hypothetical protein [Homo sapiens] 31 2.1
gi|55741655 anoctamin 8 [Homo sapiens] 31 2.8
gi|94681038 phospholipase D4 [Homo sapiens] 30 3.6
gi|14249738 N-acetylglucosamine-1-phosphotransferase, gamma subu... 30 3.6
gi|39930610 sodium channel, voltage-gated, type I, beta isoform ... 30 4.7
gi|4826651 hypothetical protein LOC755 [Homo sapiens] 30 4.7
gi|239749959 PREDICTED: hypothetical protein [Homo sapiens] 29 8.0
gi|13376844 ring finger protein 39 isoform 1 [Homo sapiens] 29 8.0
gi|25777716 ring finger protein 39 isoform 2 [Homo sapiens] 29 8.0
gi|46255017 hypothetical protein LOC84985 isoform b [Homo sapiens] 29 8.0
gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens] 29 8.0
>gi|148612798 pellino 3 alpha isoform 1 [Homo sapiens]
Length = 469
Score = 990 bits (2559), Expect = 0.0
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGCCEEGGEET 60
MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGCCEEGGEET
Sbjct: 1 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGCCEEGGEET 60
Query: 61 EAQRGEVTGPRAHSCYNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKAL 120
EAQRGEVTGPRAHSCYNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKAL
Sbjct: 61 EAQRGEVTGPRAHSCYNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKAL 120
Query: 121 SNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSA 180
SNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSA
Sbjct: 121 SNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSA 180
Query: 181 QSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLV 240
QSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLV
Sbjct: 181 QSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLV 240
Query: 241 MHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGAT 300
MHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGAT
Sbjct: 241 MHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGAT 300
Query: 301 LLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYV 360
LLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYV
Sbjct: 301 LLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYV 360
Query: 361 RCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH 420
RCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH
Sbjct: 361 RCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH 420
Query: 421 VCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD 469
VCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD
Sbjct: 421 VCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD 469
>gi|148612833 pellino 3 alpha isoform 2 [Homo sapiens]
Length = 445
Score = 924 bits (2387), Expect = 0.0
Identities = 445/469 (94%), Positives = 445/469 (94%), Gaps = 24/469 (5%)
Query: 1 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGCCEEGGEET 60
MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLG
Sbjct: 1 MVLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLG--------- 51
Query: 61 EAQRGEVTGPRAHSCYNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKAL 120
YNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKAL
Sbjct: 52 ---------------YNGCLASGDKGRRRSRLALSRRSHANGVKPDVMHHISTPLVSKAL 96
Query: 121 SNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSA 180
SNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSA
Sbjct: 97 SNRGQHSISYTLSRSHSVIVEYTHDSDTDMFQIGRSTENMIDFVVTDTSPGGGAAEGPSA 156
Query: 181 QSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLV 240
QSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLV
Sbjct: 157 QSTISRYACRILCDRRPPYTARIYAAGFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLV 216
Query: 241 MHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGAT 300
MHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGAT
Sbjct: 217 MHPAGGFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVENESNVLQDGSLIDLCGAT 276
Query: 301 LLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYV 360
LLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYV
Sbjct: 277 LLWRTPAGLLRAPTLKQLEAQRQEANAARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYV 336
Query: 361 RCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH 420
RCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH
Sbjct: 337 RCGHVHGYHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH 396
Query: 421 VCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD 469
VCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD
Sbjct: 397 VCSEKTARYWAQTPLPHGTHAFHAACPFCGAWLTGEHGCVRLIFQGPLD 445
>gi|10864063 pellino 2 [Homo sapiens]
Length = 420
Score = 621 bits (1602), Expect = e-178
Identities = 298/443 (67%), Positives = 342/443 (77%), Gaps = 28/443 (6%)
Query: 30 SPGEDAQ--PGEEPIKYGELIVLGCCEEGGEETEAQRGEVTGPRAHSCYNGCLASGDKGR 87
SPG++ P +EP+KYGEL+VLG YNG L +GD+GR
Sbjct: 3 SPGQEEHCAPNKEPVKYGELVVLG------------------------YNGALPNGDRGR 38
Query: 88 RRSRLALSRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIVEYTHDSD 147
R+SR AL +R ANGVKP +H ISTP SKA+S +GQHSISYTLSR+ +V+VEYTHD D
Sbjct: 39 RKSRFALYKRPKANGVKPSTVHVISTPQASKAISCKGQHSISYTLSRNQTVVVEYTHDKD 98
Query: 148 TDMFQIGRSTENMIDFVVTDTSPGG-GAAEGPSAQSTISRYACRILCDRRPPYTARIYAA 206
TDMFQ+GRSTE+ IDFVVTDT G E QSTISR+ACRI+CDR PYTARI+AA
Sbjct: 99 TDMFQVGRSTESPIDFVVTDTISGSQNTDEAQITQSTISRFACRIVCDRNEPYTARIFAA 158
Query: 207 GFDASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGNVY 266
GFD+S NIFLGE+AAKW+ PDG MDGLTTNGVLVMHP GGF+E+S PGVWREISVCG+VY
Sbjct: 159 GFDSSKNIFLGEKAAKWKNPDGHMDGLTTNGVLVMHPRGGFTEESQPGVWREISVCGDVY 218
Query: 267 TLRDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQEAN 326
TLR++RSAQQRGKLVE+E+NVLQDGSLIDLCGATLLWRT GL PT K +EA RQE N
Sbjct: 219 TLRETRSAQQRGKLVESETNVLQDGSLIDLCGATLLWRTADGLFHTPTQKHIEALRQEIN 278
Query: 327 AARPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQERECPL 386
AARPQCPVGL+TLAFPS R +K QPW Y+ CGHVHGYH WG R + ERECP+
Sbjct: 279 AARPQCPVGLNTLAFPSINRKEVVEEK-QPWAYLSCGHVHGYHNWGHRSDTEANERECPM 337
Query: 387 CRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFHAAC 446
CR VGPYVPLWLG EAG +D GPP+HAF PCGHVCSEK+A+YW+Q PLPHGTHAFHAAC
Sbjct: 338 CRTVGPYVPLWLGCEAGFYVDAGPPTHAFTPCGHVCSEKSAKYWSQIPLPHGTHAFHAAC 397
Query: 447 PFCGAWLTGEHGCVRLIFQGPLD 469
PFC L GE C++LIFQGP+D
Sbjct: 398 PFCATQLVGEQNCIKLIFQGPID 420
>gi|11037063 pellino protein [Homo sapiens]
Length = 418
Score = 617 bits (1592), Expect = e-177
Identities = 294/441 (66%), Positives = 344/441 (78%), Gaps = 26/441 (5%)
Query: 30 SPGEDAQPGEEPIKYGELIVLGCCEEGGEETEAQRGEVTGPRAHSCYNGCLASGDKGRRR 89
SP ++ P + P+KYGELIVLG YNG L +GD+GRR+
Sbjct: 3 SPDQENHPSKAPVKYGELIVLG------------------------YNGSLPNGDRGRRK 38
Query: 90 SRLALSRRSHANGVKPDVMHHISTPLVSKALSNRGQHSISYTLSRSHSVIVEYTHDSDTD 149
SR AL +R ANGVKP +H TP +KA+SN+ QHSISYTLSR+ +V+VEYTHDS+TD
Sbjct: 39 SRFALFKRPKANGVKPSTVHIACTPQAAKAISNKDQHSISYTLSRAQTVVVEYTHDSNTD 98
Query: 150 MFQIGRSTENMIDFVVTDTSPGGGA-AEGPSAQSTISRYACRILCDRRPPYTARIYAAGF 208
MFQIGRSTE+ IDFVVTDT PG + ++ S QSTISR+ACRI+C+R PP+TARIYAAGF
Sbjct: 99 MFQIGRSTESPIDFVVTDTVPGSQSNSDTQSVQSTISRFACRIICERNPPFTARIYAAGF 158
Query: 209 DASSNIFLGERAAKWRTPDGLMDGLTTNGVLVMHPAGGFSEDSAPGVWREISVCGNVYTL 268
D+S NIFLGE+AAKW+T DG MDGLTTNGVLVMHP GF+EDS PG+WREISVCGNV++L
Sbjct: 159 DSSKNIFLGEKAAKWKTSDGQMDGLTTNGVLVMHPRNGFTEDSKPGIWREISVCGNVFSL 218
Query: 269 RDSRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQEANAA 328
R++RSAQQRGK+VE E+N LQDGSLIDLCGATLLWRT GL PT+K LEA RQE NAA
Sbjct: 219 RETRSAQQRGKMVEIETNQLQDGSLIDLCGATLLWRTAEGLSHTPTVKHLEALRQEINAA 278
Query: 329 RPQCPVGLSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGWGCRRERGPQERECPLCR 388
RPQCPVG +TLAFPS R + D++QPWVY+ CGHVHGYH WG + ER ++RECP+CR
Sbjct: 279 RPQCPVGFNTLAFPSMKR-KDVVDEKQPWVYLNCGHVHGYHNWGNKEERDGKDRECPMCR 337
Query: 389 LVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTARYWAQTPLPHGTHAFHAACPF 448
VGPYVPLWLG EAG +D GPP+HAF+PCGHVCSEKT YW+Q PLPHGTH FHAACPF
Sbjct: 338 SVGPYVPLWLGCEAGFYVDAGPPTHAFSPCGHVCSEKTTAYWSQIPLPHGTHTFHAACPF 397
Query: 449 CGAWLTGEHGCVRLIFQGPLD 469
C L GE G +RLIFQGPLD
Sbjct: 398 CAHQLAGEQGYIRLIFQGPLD 418
>gi|239757488 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 36.6 bits (83), Expect = 0.050
Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 9/100 (9%)
Query: 230 MDGLTTNGVLVMHPAG------GFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVEN 283
MD L +L +HPAG G S G W E+ LR+ S G+L E
Sbjct: 1 MDQLPQKNLLRLHPAGSAGCSTGVESSSMDGFWMEVEQIQQRDELREEDSGGNEGQLPEE 60
Query: 284 ---ESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEA 320
ES LQD L L G L LL T Q+ A
Sbjct: 61 GEAESQWLQDTGLSGLLGGLGLDGDHQELLSTLTQTQVAA 100
>gi|239752003 PREDICTED: chromosome 20 open reading frame 95 [Homo
sapiens]
Length = 622
Score = 36.6 bits (83), Expect = 0.050
Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 9/100 (9%)
Query: 230 MDGLTTNGVLVMHPAG------GFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVEN 283
MD L +L +HPAG G S G W E+ LR+ S G+L E
Sbjct: 1 MDQLPQKNLLRLHPAGSAGCSTGVESSSMDGFWMEVEQIQQRDELREEDSGGNEGQLPEE 60
Query: 284 ---ESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEA 320
ES LQD L L G L LL T Q+ A
Sbjct: 61 GEAESQWLQDTGLSGLLGGLGLDGDHQELLSTLTQTQVAA 100
>gi|239746488 PREDICTED: Rho GTPase-activating protein 18-like [Homo
sapiens]
Length = 622
Score = 36.6 bits (83), Expect = 0.050
Identities = 33/100 (33%), Positives = 39/100 (39%), Gaps = 9/100 (9%)
Query: 230 MDGLTTNGVLVMHPAG------GFSEDSAPGVWREISVCGNVYTLRDSRSAQQRGKLVEN 283
MD L +L +HPAG G S G W E+ LR+ S G+L E
Sbjct: 1 MDQLPQKNLLRLHPAGSAGCSTGVESSSMDGFWMEVEQIQQRDELREEDSGGNEGQLPEE 60
Query: 284 ---ESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEA 320
ES LQD L L G L LL T Q+ A
Sbjct: 61 GEAESQWLQDTGLSGLLGGLGLDGDHQELLSTLTQTQVAA 100
>gi|40353769 chordin-like 2 [Homo sapiens]
Length = 451
Score = 34.3 bits (77), Expect = 0.25
Identities = 15/17 (88%), Positives = 15/17 (88%)
Query: 58 EETEAQRGEVTGPRAHS 74
EETEAQRGEV GPR HS
Sbjct: 375 EETEAQRGEVPGPRPHS 391
>gi|239752579 PREDICTED: hypothetical protein XP_002348295 [Homo
sapiens]
Length = 240
Score = 33.1 bits (74), Expect = 0.56
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
Query: 2 VLEGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGCCEEGGEETE 61
V P+ L+ RG K + V + G +PG + + V+G GG +
Sbjct: 137 VCRSRPQTRGSGGKKLRQRGEKAAAVKTCSGRSKKPGRQ-----KAAVMGAKSRGGRGKK 191
Query: 62 AQRGEVTGPRAHSCYNGCLASGDKGRRRSR 91
Q+ G A SC G G G++ R
Sbjct: 192 PQKAAAAG--AKSCNGGGKKLGRWGKKPGR 219
>gi|38045890 CUB and Sushi multiple domains 3 isoform 2 [Homo sapiens]
Length = 3667
Score = 32.3 bits (72), Expect = 0.95
Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Query: 368 YHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTA 427
Y G R G R C L P G G C DPG P H + ++ T
Sbjct: 2979 YSCTGKRSLLGQSSRTCQLNGHWSGSQPHCSGDATGTCGDPGTPGHGSRQESNFRTKSTV 3038
Query: 428 RYWAQTP-LPHGTHAFHAACPFCGAWLTGEHGC 459
RY T + HG+ C G+W + C
Sbjct: 3039 RYACDTGYILHGSE--ERTCLANGSWTGRQPEC 3069
>gi|205277354 CUB and Sushi multiple domains 3 isoform 3 [Homo
sapiens]
Length = 3538
Score = 32.3 bits (72), Expect = 0.95
Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Query: 368 YHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTA 427
Y G R G R C L P G G C DPG P H + ++ T
Sbjct: 2850 YSCTGKRSLLGQSSRTCQLNGHWSGSQPHCSGDATGTCGDPGTPGHGSRQESNFRTKSTV 2909
Query: 428 RYWAQTP-LPHGTHAFHAACPFCGAWLTGEHGC 459
RY T + HG+ C G+W + C
Sbjct: 2910 RYACDTGYILHGSE--ERTCLANGSWTGRQPEC 2940
>gi|38045888 CUB and Sushi multiple domains 3 isoform 1 [Homo sapiens]
Length = 3707
Score = 32.3 bits (72), Expect = 0.95
Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Query: 368 YHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTA 427
Y G R G R C L P G G C DPG P H + ++ T
Sbjct: 3019 YSCTGKRSLLGQSSRTCQLNGHWSGSQPHCSGDATGTCGDPGTPGHGSRQESNFRTKSTV 3078
Query: 428 RYWAQTP-LPHGTHAFHAACPFCGAWLTGEHGC 459
RY T + HG+ C G+W + C
Sbjct: 3079 RYACDTGYILHGSE--ERTCLANGSWTGRQPEC 3109
>gi|219842266 usherin isoform B [Homo sapiens]
Length = 5202
Score = 32.0 bits (71), Expect = 1.2
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 20/146 (13%)
Query: 310 LRAPTLKQLEAQRQEANAARPQCPVGLSTL--AFPSPARGRTAPDKQQPWVYVRCGHVHG 367
LRAPT + + + N + P P G+ +L F S A G + +HG
Sbjct: 4738 LRAPTFHVISSTQAVVNISAPGKPNGIVSLYRLFSSSAHGAETVLSEG---MATQQTLHG 4794
Query: 368 YHGWGCRRERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGHVCSEKTA 427
+ G + C C GP A L P PPS +P + +TA
Sbjct: 4795 LQAF-TNYSIGVEACTCFNCCSKGP--------TAELRTHPAPPSGLSSPQIGTLASRTA 4845
Query: 428 RY-WAQTPLPHGT-HA----FHAACP 447
+ W+ P+G H+ FH ACP
Sbjct: 4846 SFRWSPPMFPNGVIHSYELQFHVACP 4871
>gi|239757960 PREDICTED: hypothetical protein [Homo sapiens]
Length = 292
Score = 31.2 bits (69), Expect = 2.1
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 326 NAARPQCPVGLSTLAFPSPARGRTA--PDKQQPWVYVRCGHVHGYHGW-GCRRERGPQER 382
+ +RP C G S LA P PAR + P P + G + G G G R E P
Sbjct: 52 SCSRPLC-AGSSCLATPEPARAPSIAEPGPGIPVAAAKPGVLPGGGGCTGARTENPPLSP 110
Query: 383 ECPLCRLVGPYVPLWLGQEAGLCLDPGPP 411
CR+ P P+ L +G PG P
Sbjct: 111 TRGDCRVPVPAAPISLRWRSGREARPGGP 139
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 30.8 bits (68), Expect = 2.8
Identities = 33/106 (31%), Positives = 41/106 (38%), Gaps = 12/106 (11%)
Query: 316 KQLEAQR-QEANAARPQCPVG---LSTLAFPSPARGRTAPDKQQPWVYVRCGHVHGYHGW 371
++LEA R +E + PVG L T SPA P + P C G W
Sbjct: 1098 EELEAPRPEEEGSGTALAPVGAPALRTRRSRSPAPPPPMPLPRPPTPPAGCWQWDG--PW 1155
Query: 372 GCRRERGPQER-----ECPLCRLVG-PYVPLWLGQEAGLCLDPGPP 411
GC E + ECP C + G P P L +A P PP
Sbjct: 1156 GCGGEGAAPRQALAAAECPPCAMAGPPPAPQPLPGDASFYSLPPPP 1201
>gi|94681038 phospholipase D4 [Homo sapiens]
Length = 506
Score = 30.4 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 371 WGCRRE-RGPQERECPLCRLVGPYVPLWLGQEAGLCL---DPGPPSHAFAPCGHVCSEKT 426
W C R P +RE +++G LWLG A +CL P PP+ G V +
Sbjct: 14 WPCSMPPRRPWDREAGTLQVLGALAVLWLGSVALICLLWQVPRPPT-----WGQVQPKDV 68
Query: 427 ARYWAQTPLP 436
R W P
Sbjct: 69 PRSWEHGSSP 78
>gi|14249738 N-acetylglucosamine-1-phosphotransferase, gamma subunit
[Homo sapiens]
Length = 305
Score = 30.4 bits (67), Expect = 3.6
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 14/83 (16%)
Query: 254 GVWREISVCGNVYT---LRD-----SRSAQQRGKLVENESNVLQDGSLIDLCGATLLWRT 305
G+W E + N +T +RD SRS Q + +L +SN L S C L + T
Sbjct: 106 GIWHEWEIANNTFTGMWMRDGDACRSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFET 165
Query: 306 PA-----GLLRAPTLKQLEAQRQ 323
P LL PTL + QRQ
Sbjct: 166 PLVCHPHALLVYPTLPE-ALQRQ 187
>gi|39930610 sodium channel, voltage-gated, type I, beta isoform b
[Homo sapiens]
Length = 268
Score = 30.0 bits (66), Expect = 4.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 321 QRQEANAARPQCPVGLSTLAFPSPARGRTAP 351
QR E + P CP+ L L SP RG++ P
Sbjct: 190 QRAEGEGSSPSCPLQLWPLFLSSPRRGQSMP 220
>gi|4826651 hypothetical protein LOC755 [Homo sapiens]
Length = 256
Score = 30.0 bits (66), Expect = 4.7
Identities = 17/54 (31%), Positives = 22/54 (40%)
Query: 4 EGNPEVGSPRTSDLQHRGNKGSCVLSSPGEDAQPGEEPIKYGELIVLGCCEEGG 57
EG +P H G K C LSS A+ G +P+ E G +E G
Sbjct: 137 EGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEATSGAQDERG 190
>gi|239749959 PREDICTED: hypothetical protein [Homo sapiens]
Length = 959
Score = 29.3 bits (64), Expect = 8.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 368 YHGWGCRRERGPQERECP 385
+H WGCR + Q+R CP
Sbjct: 293 HHPWGCREDMAEQKRVCP 310
>gi|13376844 ring finger protein 39 isoform 1 [Homo sapiens]
Length = 420
Score = 29.3 bits (64), Expect = 8.0
Identities = 26/76 (34%), Positives = 26/76 (34%), Gaps = 21/76 (27%)
Query: 376 ERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH-VCSEKTARYWAQTP 434
ER Q CPLC G DP C H C AR W TP
Sbjct: 80 ERLEQLATCPLC--------------GGSFEDP-----VLLACEHSFCRACLARRWG-TP 119
Query: 435 LPHGTHAFHAACPFCG 450
GT A ACP CG
Sbjct: 120 PATGTEASPTACPCCG 135
>gi|25777716 ring finger protein 39 isoform 2 [Homo sapiens]
Length = 354
Score = 29.3 bits (64), Expect = 8.0
Identities = 26/76 (34%), Positives = 26/76 (34%), Gaps = 21/76 (27%)
Query: 376 ERGPQERECPLCRLVGPYVPLWLGQEAGLCLDPGPPSHAFAPCGH-VCSEKTARYWAQTP 434
ER Q CPLC G DP C H C AR W TP
Sbjct: 80 ERLEQLATCPLC--------------GGSFEDP-----VLLACEHSFCRACLARRWG-TP 119
Query: 435 LPHGTHAFHAACPFCG 450
GT A ACP CG
Sbjct: 120 PATGTEASPTACPCCG 135
>gi|46255017 hypothetical protein LOC84985 isoform b [Homo sapiens]
Length = 367
Score = 29.3 bits (64), Expect = 8.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 277 RGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQEANAARPQCP 333
R +NES L +L+D G+ WR + L +EAQ +A A P CP
Sbjct: 26 RADFSDNESARLATDALLD-GGSEAYWRVLSQEGEVDFLSSVEAQYIQAQAREPPCP 81
>gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens]
Length = 434
Score = 29.3 bits (64), Expect = 8.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 277 RGKLVENESNVLQDGSLIDLCGATLLWRTPAGLLRAPTLKQLEAQRQEANAARPQCP 333
R +NES L +L+D G+ WR + L +EAQ +A A P CP
Sbjct: 26 RADFSDNESARLATDALLD-GGSEAYWRVLSQEGEVDFLSSVEAQYIQAQAREPPCP 81
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,438,146
Number of Sequences: 37866
Number of extensions: 1171742
Number of successful extensions: 2819
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2799
Number of HSP's gapped (non-prelim): 29
length of query: 469
length of database: 18,247,518
effective HSP length: 106
effective length of query: 363
effective length of database: 14,233,722
effective search space: 5166841086
effective search space used: 5166841086
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.