Search of human proteins with 148596996

Search of human proteins with 148596996

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148596996 CUE domain containing 2 [Homo sapiens]
         (287 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148596996 CUE domain containing 2 [Homo sapiens]                   570   e-163
gi|170763515 DMRT-like family A1 [Homo sapiens]                        36   0.045
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]     32   0.49 
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]     32   0.64 
gi|219521893 coiled-coil transcriptional coactivator isoform 2 [...    32   0.64 
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              31   1.1  
gi|222537750 ankyrin repeat domain 30B [Homo sapiens]                  31   1.4  
gi|110349719 titin isoform N2-A [Homo sapiens]                         31   1.4  
gi|115495445 ankyrin repeat domain 30A [Homo sapiens]                  31   1.4  
gi|41281683 disabled homolog 2 interacting protein isoform 2 [Ho...    31   1.4  
gi|94967023 disabled homolog 2 interacting protein isoform 1 [Ho...    31   1.4  
gi|14327896 cyclin B1 [Homo sapiens]                                   31   1.4  
gi|19923477 NEDD8 ultimate buster-1 [Homo sapiens]                     31   1.4  
gi|27734829 hypothetical protein LOC256329 [Homo sapiens]              31   1.4  
gi|209413756 synapsin III isoform IIIg [Homo sapiens]                  30   2.4  
gi|209413752 synapsin III isoform IIIa [Homo sapiens]                  30   2.4  
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         30   2.4  
gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]            30   3.2  
gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]             30   3.2  
gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]             30   3.2  
gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo sa...    30   3.2  
gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo sa...    30   3.2  
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ...    30   3.2  
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ...    30   3.2  
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ...    30   3.2  
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ...    30   3.2  
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ...    30   3.2  
gi|157694505 LINE-1 type transposase domain containing 1 [Homo s...    30   3.2  
gi|190684671 mitogen-activated protein kinase binding protein 1 ...    30   3.2  
gi|190684677 mitogen-activated protein kinase binding protein 1 ...    30   3.2  

>gi|148596996 CUE domain containing 2 [Homo sapiens]
          Length = 287

 Score =  570 bits (1468), Expect = e-163
 Identities = 287/287 (100%), Positives = 287/287 (100%)

Query: 1   MELERIVSAALLAFVQTHLPEADLSGLDEVIFSYVLGVLEDLGPSGPSEENFDMEAFTEM 60
           MELERIVSAALLAFVQTHLPEADLSGLDEVIFSYVLGVLEDLGPSGPSEENFDMEAFTEM
Sbjct: 1   MELERIVSAALLAFVQTHLPEADLSGLDEVIFSYVLGVLEDLGPSGPSEENFDMEAFTEM 60

Query: 61  MEAYVPGFAHIPRGTIGDMMQKLSGQLSDARNKENLQPQSSGVQGQVPISPEPLQRPEML 120
           MEAYVPGFAHIPRGTIGDMMQKLSGQLSDARNKENLQPQSSGVQGQVPISPEPLQRPEML
Sbjct: 61  MEAYVPGFAHIPRGTIGDMMQKLSGQLSDARNKENLQPQSSGVQGQVPISPEPLQRPEML 120

Query: 121 KEETRSSAAAAADTQDEATGAEEELLPGVDVLLEVFPTCSVEQAQWVLAKARGDLEEAVQ 180
           KEETRSSAAAAADTQDEATGAEEELLPGVDVLLEVFPTCSVEQAQWVLAKARGDLEEAVQ
Sbjct: 121 KEETRSSAAAAADTQDEATGAEEELLPGVDVLLEVFPTCSVEQAQWVLAKARGDLEEAVQ 180

Query: 181 MLVEGKEEGPAAWEGPNQDLPRRLRGPQKDELKSFILQKYMMVDSAEDQKIHRPMAPKEA 240
           MLVEGKEEGPAAWEGPNQDLPRRLRGPQKDELKSFILQKYMMVDSAEDQKIHRPMAPKEA
Sbjct: 181 MLVEGKEEGPAAWEGPNQDLPRRLRGPQKDELKSFILQKYMMVDSAEDQKIHRPMAPKEA 240

Query: 241 PKKLIRYIDNQVVSTKGERFKDVRNPEAEEMKATYINLKPARKYRFH 287
           PKKLIRYIDNQVVSTKGERFKDVRNPEAEEMKATYINLKPARKYRFH
Sbjct: 241 PKKLIRYIDNQVVSTKGERFKDVRNPEAEEMKATYINLKPARKYRFH 287


>gi|170763515 DMRT-like family A1 [Homo sapiens]
          Length = 504

 Score = 35.8 bits (81), Expect = 0.045
 Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 4/142 (2%)

Query: 50  ENFDMEAFTEMMEAYVPGFAHIPRGTIGDMMQKLSGQLSDARNK-ENLQPQSSGVQGQVP 108
           +N   E  ++  + Y+ G +    G IG   Q +   +S+  NK +++     G Q    
Sbjct: 233 QNGQEELISKSHQLYL-GSSSRSNGVIGK--QSIGSSISEYSNKPDSILSPHPGEQSGGE 289

Query: 109 ISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPGVDVLLEVFPTCSVEQAQWVL 168
            SP  L   ++              T+             +D+L ++FP     + + +L
Sbjct: 290 ESPRSLSSSDLESGNESEWVKDLTATKASLPTVSSRPRDPLDILTKIFPNYRRSRLEGIL 349

Query: 169 AKARGDLEEAVQMLVEGKEEGP 190
              +GD+ +A++ ++ GKE  P
Sbjct: 350 RFCKGDVVQAIEQVLNGKEHKP 371


>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
          Length = 1960

 Score = 32.3 bits (72), Expect = 0.49
 Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 7/111 (6%)

Query: 76   IGDMMQKLSGQLSDARNKENLQPQSSGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQ 135
            +G+ ++ L  +L D  +    Q +    + Q     E     + L+EE ++  A   + +
Sbjct: 1137 LGEELEALKTELEDTLDSTAAQQELRSKREQ-----EVNILKKTLEEEAKTHEAQIQEMR 1191

Query: 136  DEATGAEEELLPGVDVLLEVFPTCSVEQAQWVLAKARGDLEEAVQMLVEGK 186
             + + A EEL   ++    V    ++E+A+  L   RG+L   V++L++GK
Sbjct: 1192 QKHSQAVEELAEQLEQTKRV--KANLEKAKQTLENERGELANEVKVLLQGK 1240


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 25/204 (12%)

Query: 89  DARNKENLQPQSSGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPG 148
           D ++ E   P     +      PE  + P  +KEE +S   A +  +++A   E+E+   
Sbjct: 760 DVKSPEAKTPAKEEARSPADKFPEKAKSP--VKEEVKSPEKAKSPLKEDAKAPEKEIPKK 817

Query: 149 VDVLLEVFPTCSVEQAQWVLAK---ARGDLEEAVQMLVEGKEEGPAAWEGPNQDLPRRLR 205
            +V     P    E+ Q V  K    + + E+A       +++     E P ++ P+   
Sbjct: 818 EEV---KSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPK--- 871

Query: 206 GPQKDELKSFILQK------YMMVDSAEDQKIHRPMAPKEAPKKLIRYIDNQVVSTKGER 259
            P+ +E K   ++K          + AED+K   P   KEAP K+    D      K + 
Sbjct: 872 -PKVEEKKEPAVEKPKESKVEAKKEEAEDKK-KVPTPEKEAPAKVEVKED-----AKPKE 924

Query: 260 FKDVRNPEAEEMKATYINLKPARK 283
             +V   E ++ KA   + KPA K
Sbjct: 925 KTEVAKKEPDDAKAKEPS-KPAEK 947



 Score = 29.3 bits (64), Expect = 4.2
 Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 14/171 (8%)

Query: 110 SPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPGVDVLLEVFPTCSVEQAQWVLA 169
           SPE  + P  +KEE +S A A +  ++EA    E   P            S E+A+    
Sbjct: 600 SPEKAKSP--VKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAK-SPE 656

Query: 170 KARGDLEEAVQMLVEGKEEGPAAWEGP---NQDLPRRLRGPQKDELKSFILQKYMMVDSA 226
           K      E  +  V+ + + P   + P       P + + P K+E KS    K  + + A
Sbjct: 657 KEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEA 716

Query: 227 EDQKIHRPMAPKEA--PKKLIRYIDNQVVSTK----GERFK--DVRNPEAE 269
           +  +  +    +EA  P+K    +  +  S +     E+ K  DV++PEA+
Sbjct: 717 KSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAK 767


>gi|219521893 coiled-coil transcriptional coactivator isoform 2
           [Homo sapiens]
          Length = 606

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 7/105 (6%)

Query: 81  QKLSGQLSDAR-----NKENLQPQSSGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQ 135
           +KL GQL + +     ++  L+P    ++G   ++    Q+  +L EE  S+AAA   T 
Sbjct: 233 EKLLGQLKEVQADKEQSEAELEPLKEQLRGAQELAASSQQKATLLGEELASAAAARDRTI 292

Query: 136 DEATGAEEELLPGVDVLLEVFPTCSVEQAQWVLAKARGDLEEAVQ 180
            E   +  E+      L E+      E+ QW  +K R  L ++V+
Sbjct: 293 AELHRSRLEVAEVNGRLAELGLHLKEEKCQW--SKERAGLLQSVE 335


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 19/127 (14%)

Query: 85   GQLSDARNKENLQPQSSGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEE 144
            G++ +A  +E  QP+S GV+ Q     E  Q  E   ++T   A   +D   EA  AEEE
Sbjct: 2007 GEMQEA--EEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGV-EAPEAEEE 2063

Query: 145  LLPGVDVLLEVFPTCSVEQAQWVLAKARGDLEEAVQMLVEGKEEGPAAWEGPNQDLPRRL 204
                             ++A+  + +A G+     + +   + EG A  E    + P   
Sbjct: 2064 ----------------AQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAE 2107

Query: 205  RGPQKDE 211
               QK E
Sbjct: 2108 GEAQKAE 2114


>gi|222537750 ankyrin repeat domain 30B [Homo sapiens]
          Length = 1392

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 49  EENFDMEAFTEMMEAYVPGFAHIPRGTIGDMMQKLSGQLSDARNKENLQPQSSGVQGQVP 108
           E ++D E+F   +E  +     +P+ T       LSG+L ++ +K+ L   + G++  +P
Sbjct: 725 ENSWDFESF---LETLLQNDVCLPKATHQKEFDTLSGKLEESPDKDGLLKPTCGMKISLP 781

Query: 109 ISPEPLQRPEMLKEETRSS 127
                L+  E  K E  SS
Sbjct: 782 NKALELKDRETFKAEDVSS 800


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 24/160 (15%)

Query: 93    KENLQPQSSGVQGQVPISPE-----PLQRPEMLKEETRSSAAAAADTQDEATGAEEELLP 147
             +E + P+   +  +  + PE     P +   + +EE           ++E    EEE +P
Sbjct: 10110 EEEIVPEEEVLPEEEEVLPEEEEVLPEEEEVLPEEEEIPPEEEEVPPEEEYVPEEEEFVP 10169

Query: 148   GVDVLLEVFPTCSVEQAQWVLAKARGDLEEAVQMLVEGKEEGPAAWEGPNQDLPRRLRGP 207
               +VL EV P   V             + E  + + E K   P   E P   +P     P
Sbjct: 10170 EEEVLPEVKPKVPVP----------APVPEIKKKVTEKKVVIPKKEEAPPAKVP---EVP 10216

Query: 208   QKDELKSFILQK------YMMVDSAEDQKIHRPMAPKEAP 241
             +K E K  IL K        + +  E++ I     P+E P
Sbjct: 10217 KKVEEKRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPP 10256


>gi|115495445 ankyrin repeat domain 30A [Homo sapiens]
          Length = 1341

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 14/91 (15%)

Query: 71  IPRGTIGDMMQKLSGQLSDARNKENLQPQSSGVQGQVP-----------ISPEPLQRP-- 117
           +P+ T    + K++G+L ++ NK+ L   + G++  +P              EP  +P  
Sbjct: 526 LPKATHQKEIDKINGKLEESPNKDGLLKATCGMKVSIPTKALELKDMQTFKAEPPGKPSA 585

Query: 118 -EMLKEETRSSAAAAADTQDEATGAEEELLP 147
            E   E  +S    A + ++E T   +E+LP
Sbjct: 586 FEPATEMQKSVPNKALELKNEQTLRADEILP 616


>gi|41281683 disabled homolog 2 interacting protein isoform 2 [Homo
            sapiens]
          Length = 1065

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 23/163 (14%)

Query: 88   SDARNKENLQPQSSGVQGQVPISPEPLQR---------PEMLKEETRSSAAAAAD---TQ 135
            S   +   L+P++   QG  P+SP  L R          ++L++E         D   ++
Sbjct: 849  SSKGDSPELKPRAVHKQGPSPVSPNALDRTAAWLLTMNAQLLEDEGLGPDPPHRDRLRSK 908

Query: 136  DEATGAEEELLPGVDVL------LEVFPT---CSVEQAQWVLAKARGDLEEAVQMLVEGK 186
            DE + AE++L    D L      LE + T   C  E  Q ++ + +  LEE  + L   +
Sbjct: 909  DELSQAEKDLAVLQDKLRISTKKLEEYETLFKCQEETTQKLVLEYQARLEEGEERLRRQQ 968

Query: 187  EEGPAAWEGPNQDLPRRLRGPQKD--ELKSFILQKYMMVDSAE 227
            E+     +G    L       +KD  E+++ +  K  ++D+ E
Sbjct: 969  EDKDIQMKGIISRLMSVEEELKKDHAEMQAAVDSKQKIIDAQE 1011


>gi|94967023 disabled homolog 2 interacting protein isoform 1 [Homo
            sapiens]
          Length = 1132

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 23/163 (14%)

Query: 88   SDARNKENLQPQSSGVQGQVPISPEPLQR---------PEMLKEETRSSAAAAAD---TQ 135
            S   +   L+P++   QG  P+SP  L R          ++L++E         D   ++
Sbjct: 945  SSKGDSPELKPRAVHKQGPSPVSPNALDRTAAWLLTMNAQLLEDEGLGPDPPHRDRLRSK 1004

Query: 136  DEATGAEEELLPGVDVL------LEVFPT---CSVEQAQWVLAKARGDLEEAVQMLVEGK 186
            DE + AE++L    D L      LE + T   C  E  Q ++ + +  LEE  + L   +
Sbjct: 1005 DELSQAEKDLAVLQDKLRISTKKLEEYETLFKCQEETTQKLVLEYQARLEEGEERLRRQQ 1064

Query: 187  EEGPAAWEGPNQDLPRRLRGPQKD--ELKSFILQKYMMVDSAE 227
            E+     +G    L       +KD  E+++ +  K  ++D+ E
Sbjct: 1065 EDKDIQMKGIISRLMSVEEELKKDHAEMQAAVDSKQKIIDAQE 1107


>gi|14327896 cyclin B1 [Homo sapiens]
          Length = 433

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 29/113 (25%)

Query: 72  PRGTIGDMMQKLSGQL-SDARNKENLQPQSSG---------------VQGQVPIS----- 110
           PR  +GD+  K+S QL +    K+  +P ++G               +   VP+S     
Sbjct: 41  PRTALGDIGNKVSEQLQAKMPMKKEAKPSATGKVIDKKLPKPLEKVPMLVPVPVSEPVPE 100

Query: 111 PEPLQRPEMLKEETRSSAAAAADTQD----EATG---AEEELLPGV-DVLLEV 155
           PEP   PE +KEE  S      DT      E +G   AEE+L     DV+L V
Sbjct: 101 PEPEPEPEPVKEEKLSPEPILVDTASPSPMETSGCAPAEEDLCQAFSDVILAV 153


>gi|19923477 NEDD8 ultimate buster-1 [Homo sapiens]
          Length = 601

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 13/124 (10%)

Query: 47  PSEENFDMEAFTEMMEAYVPGFAHIPRGTIGDMMQKLSGQLSDARNKENLQPQSSGVQGQ 106
           PS+EN D   +             + RG +    Q L      A N  +L P+       
Sbjct: 476 PSQENIDRLVYMGFDALVAEAALRVFRGNVQLAAQTL------AHNGGSLPPE------- 522

Query: 107 VPISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPGVDVLLEVFPTCSVEQAQW 166
           +P+SPE    P        +  ++A+  +D  T A  E+L  +    E +   ++E  + 
Sbjct: 523 LPLSPEDSLSPPATSPSDSAGTSSASTDEDMETEAVNEILEDIPEHEEDYLDSTLEDEEI 582

Query: 167 VLAK 170
           ++A+
Sbjct: 583 IIAE 586


>gi|27734829 hypothetical protein LOC256329 [Homo sapiens]
          Length = 634

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 37  GVLEDLGPSGPSEENFDMEAFTEMMEAYVPGFAHIPRGTIGDMMQKLSGQLSDARNKENL 96
           G L  L  S     + D  +    + ++V    H PR       Q L    S +R+ E+L
Sbjct: 268 GSLPCLNTSSSGGADSDSSSCRPGLPSFVQVIGHPPRDHRASSEQALVQAGSYSRDSEDL 327

Query: 97  QPQSSGVQGQVPISPEPLQRPEMLKEETRSS 127
           Q   S   G+  +SP+P   P+    E   S
Sbjct: 328 QKTHSPRHGEPVLSPQPCTDPDHWSPELLQS 358


>gi|209413756 synapsin III isoform IIIg [Homo sapiens]
          Length = 579

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 66  PGFAHIPRGTIGDMMQKLS--GQLSDARNKENLQPQSSGVQGQVPISPEPLQRPEMLKEE 123
           PG   + R + G    + S  G    ++ +  +Q +S+  QG+    P P   P + K +
Sbjct: 481 PGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAP-PHPHLNKSQ 539

Query: 124 TRSSAAAAADTQDEATGAEEE 144
           + +++ + +DT    T +E+E
Sbjct: 540 SLTNSLSTSDTSQRGTPSEDE 560


>gi|209413752 synapsin III isoform IIIa [Homo sapiens]
          Length = 580

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 66  PGFAHIPRGTIGDMMQKLS--GQLSDARNKENLQPQSSGVQGQVPISPEPLQRPEMLKEE 123
           PG   + R + G    + S  G    ++ +  +Q +S+  QG+    P P   P + K +
Sbjct: 482 PGSPQLSRASSGSSPNQASKPGATLASQPRPPVQGRSTSQQGEESKKPAP-PHPHLNKSQ 540

Query: 124 TRSSAAAAADTQDEATGAEEE 144
           + +++ + +DT    T +E+E
Sbjct: 541 SLTNSLSTSDTSQRGTPSEDE 561


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 82  KLSGQLSDARNKENLQPQSSGVQGQVPISPEPLQRPEMLKEE 123
           +++ Q  DAR +E  +    GV    P SP PL RPE L+E+
Sbjct: 389 QIASQARDARARER-EAGRPGVLQAPPGSPRPLDRPEGLREK 429


>gi|169214048 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 881

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 20/72 (27%), Positives = 30/72 (41%)

Query: 20  PEADLSGLDEVIFSYVLGVLEDLGPSGPSEENFDMEAFTEMMEAYVPGFAHIPRGTIGDM 79
           PEA  S +    +S V    +DL P  P  E    E F ++ +  VP     P  T+   
Sbjct: 82  PEALSSNMSGSFWSNVSAEGQDLSPVSPFSETPGSEVFPDISDPQVPAKDPKPSFTVKTP 141

Query: 80  MQKLSGQLSDAR 91
              +S Q+S  +
Sbjct: 142 ASNISTQVSHTK 153


>gi|89057602 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 881

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 20/72 (27%), Positives = 30/72 (41%)

Query: 20  PEADLSGLDEVIFSYVLGVLEDLGPSGPSEENFDMEAFTEMMEAYVPGFAHIPRGTIGDM 79
           PEA  S +    +S V    +DL P  P  E    E F ++ +  VP     P  T+   
Sbjct: 82  PEALSSNMSGSFWSNVSAEGQDLSPVSPFSETPGSEVFPDISDPQVPAKDPKPSFTVKTP 141

Query: 80  MQKLSGQLSDAR 91
              +S Q+S  +
Sbjct: 142 ASNISTQVSHTK 153


>gi|37551995 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 867

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 20/72 (27%), Positives = 30/72 (41%)

Query: 20  PEADLSGLDEVIFSYVLGVLEDLGPSGPSEENFDMEAFTEMMEAYVPGFAHIPRGTIGDM 79
           PEA  S +    +S V    +DL P  P  E    E F ++ +  VP     P  T+   
Sbjct: 82  PEALSSNMSGSFWSNVSAEGQDLSPVSPFSETPGSEVFPDISDPQVPAKDPKPSFTVKTP 141

Query: 80  MQKLSGQLSDAR 91
              +S Q+S  +
Sbjct: 142 ASNISTQVSHTK 153


>gi|21493022 A kinase (PRKA) anchor protein 12 isoform 1 [Homo
           sapiens]
          Length = 1782

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 39/160 (24%)

Query: 39  LEDLGPSGPSEENFDMEAFTEMMEAYVPGFAHIPRGTIGDMMQKLSGQLSDARNKENLQP 98
           +ED GP+G +E++ D+ A   + E                          DA  +E ++ 
Sbjct: 828 VEDAGPTGANEDDSDVPAVVPLSE-------------------------YDAVEREKMEA 862

Query: 99  QSSGVQGQVPISPEPLQRPEMLKEETRSS----AAAAADTQDEATGAEEELLPGVDVLLE 154
           Q +    +    PE     E+ KE + S     AAA AD    AT  EE     +   + 
Sbjct: 863 QQAQKSAE---QPEQKAATEVSKELSESQVHMMAAAVADGTRAATIIEERSPSWISASV- 918

Query: 155 VFPTCSVEQAQWVLAKARGDLEEAVQMLVEGKEEGPAAWE 194
                  E  + V A+A    EE ++  V  +EE P   E
Sbjct: 919 ------TEPLEQVEAEAALLTEEVLEREVIAEEEPPTVTE 952


>gi|21493024 A kinase (PRKA) anchor protein 12 isoform 2 [Homo
           sapiens]
          Length = 1684

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 39/160 (24%), Positives = 60/160 (37%), Gaps = 39/160 (24%)

Query: 39  LEDLGPSGPSEENFDMEAFTEMMEAYVPGFAHIPRGTIGDMMQKLSGQLSDARNKENLQP 98
           +ED GP+G +E++ D+ A   + E                          DA  +E ++ 
Sbjct: 730 VEDAGPTGANEDDSDVPAVVPLSE-------------------------YDAVEREKMEA 764

Query: 99  QSSGVQGQVPISPEPLQRPEMLKEETRSS----AAAAADTQDEATGAEEELLPGVDVLLE 154
           Q +    +    PE     E+ KE + S     AAA AD    AT  EE     +   + 
Sbjct: 765 QQAQKSAE---QPEQKAATEVSKELSESQVHMMAAAVADGTRAATIIEERSPSWISASV- 820

Query: 155 VFPTCSVEQAQWVLAKARGDLEEAVQMLVEGKEEGPAAWE 194
                  E  + V A+A    EE ++  V  +EE P   E
Sbjct: 821 ------TEPLEQVEAEAALLTEEVLEREVIAEEEPPTVTE 854


>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
           isoform 1 [Homo sapiens]
          Length = 1599

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 101 SGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPGVDV-----LLEV 155
           S      P +  P Q  EM +EE      A    + E+    EELLP         L + 
Sbjct: 439 SATPATAPSATSPAQEEEMEEEEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQN 498

Query: 156 FPTCSVEQAQWVLAKARGDL-----EEAVQMLVEG-KEEGPAAWEGPNQDLPRRLRGPQK 209
               +  Q    + K R  +     +EAV  L++  KE  PA  E  NQ       GP+ 
Sbjct: 499 LEAAAATQVAVSVPKRRRKIKELNKKEAVGDLLDAFKEANPAVPEVENQPPAGSNPGPES 558

Query: 210 D 210
           +
Sbjct: 559 E 559


>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
           isoform 2 [Homo sapiens]
          Length = 1512

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 101 SGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPGVDV-----LLEV 155
           S      P +  P Q  EM +EE      A    + E+    EELLP         L + 
Sbjct: 352 SATPATAPSATSPAQEEEMEEEEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQN 411

Query: 156 FPTCSVEQAQWVLAKARGDL-----EEAVQMLVEG-KEEGPAAWEGPNQDLPRRLRGPQK 209
               +  Q    + K R  +     +EAV  L++  KE  PA  E  NQ       GP+ 
Sbjct: 412 LEAAAATQVAVSVPKRRRKIKELNKKEAVGDLLDAFKEANPAVPEVENQPPAGSNPGPES 471

Query: 210 D 210
           +
Sbjct: 472 E 472


>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
           isoform 3 [Homo sapiens]
          Length = 1435

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 101 SGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPGVDV-----LLEV 155
           S      P +  P Q  EM +EE      A    + E+    EELLP         L + 
Sbjct: 275 SATPATAPSATSPAQEEEMEEEEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQN 334

Query: 156 FPTCSVEQAQWVLAKARGDL-----EEAVQMLVEG-KEEGPAAWEGPNQDLPRRLRGPQK 209
               +  Q    + K R  +     +EAV  L++  KE  PA  E  NQ       GP+ 
Sbjct: 335 LEAAAATQVAVSVPKRRRKIKELNKKEAVGDLLDAFKEANPAVPEVENQPPAGSNPGPES 394

Query: 210 D 210
           +
Sbjct: 395 E 395


>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
           isoform 1 [Homo sapiens]
          Length = 1599

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 101 SGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPGVDV-----LLEV 155
           S      P +  P Q  EM +EE      A    + E+    EELLP         L + 
Sbjct: 439 SATPATAPSATSPAQEEEMEEEEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQN 498

Query: 156 FPTCSVEQAQWVLAKARGDL-----EEAVQMLVEG-KEEGPAAWEGPNQDLPRRLRGPQK 209
               +  Q    + K R  +     +EAV  L++  KE  PA  E  NQ       GP+ 
Sbjct: 499 LEAAAATQVAVSVPKRRRKIKELNKKEAVGDLLDAFKEANPAVPEVENQPPAGSNPGPES 558

Query: 210 D 210
           +
Sbjct: 559 E 559


>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
           isoform 4 [Homo sapiens]
          Length = 1403

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 101 SGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPGVDV-----LLEV 155
           S      P +  P Q  EM +EE      A    + E+    EELLP         L + 
Sbjct: 243 SATPATAPSATSPAQEEEMEEEEEEEEGEAGEAGEAESEKGGEELLPPESTPIPANLSQN 302

Query: 156 FPTCSVEQAQWVLAKARGDL-----EEAVQMLVEG-KEEGPAAWEGPNQDLPRRLRGPQK 209
               +  Q    + K R  +     +EAV  L++  KE  PA  E  NQ       GP+ 
Sbjct: 303 LEAAAATQVAVSVPKRRRKIKELNKKEAVGDLLDAFKEANPAVPEVENQPPAGSNPGPES 362

Query: 210 D 210
           +
Sbjct: 363 E 363


>gi|157694505 LINE-1 type transposase domain containing 1 [Homo
           sapiens]
          Length = 865

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 80  MQKLSGQLSDARNKENLQPQSSGVQGQVPIS--PEPLQRPEMLKEETRSSAAAAADTQDE 137
           M+ L  Q  +    E L  ++SG++     S   E  + P  L+EE    A+   +  DE
Sbjct: 371 MKNLETQEEEFSELEELDEEASGMEDDEDTSGLEEEEEEPSGLEEEEEEEASGLEE--DE 428

Query: 138 ATGAEEE 144
           A+G EEE
Sbjct: 429 ASGLEEE 435


>gi|190684671 mitogen-activated protein kinase binding protein 1
            isoform a [Homo sapiens]
          Length = 1508

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 21/84 (25%)

Query: 98   PQSSGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPGVDVLLEVFP 157
            P SS  QG   + P P ++     E T+  AA + D++                     P
Sbjct: 1368 PVSSLFQGPENLQPPPPEKTPNPMECTKPGAALSQDSE---------------------P 1406

Query: 158  TCSVEQAQWVLAKARGDLEEAVQM 181
              S+EQ + ++A+ RG + +AV++
Sbjct: 1407 AVSLEQCEQLVAELRGSVRQAVRL 1430


>gi|190684677 mitogen-activated protein kinase binding protein 1
            isoform b [Homo sapiens]
          Length = 1514

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 21/84 (25%)

Query: 98   PQSSGVQGQVPISPEPLQRPEMLKEETRSSAAAAADTQDEATGAEEELLPGVDVLLEVFP 157
            P SS  QG   + P P ++     E T+  AA + D++                     P
Sbjct: 1374 PVSSLFQGPENLQPPPPEKTPNPMECTKPGAALSQDSE---------------------P 1412

Query: 158  TCSVEQAQWVLAKARGDLEEAVQM 181
              S+EQ + ++A+ RG + +AV++
Sbjct: 1413 AVSLEQCEQLVAELRGSVRQAVRL 1436


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.131    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,655,590
Number of Sequences: 37866
Number of extensions: 554872
Number of successful extensions: 1631
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 1609
Number of HSP's gapped (non-prelim): 102
length of query: 287
length of database: 18,247,518
effective HSP length: 101
effective length of query: 186
effective length of database: 14,423,052
effective search space: 2682687672
effective search space used: 2682687672
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.