Guide to the Human Genome
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Name: MYBPHL Sequence: fasta or formatted (354aa) NCBI GI: 194018539
Description:

myosin binding protein H-like

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         33           2
 C cysteine            2.5          9           2
 D aspartate           5.1         18           1
 E glutamate           4.8         17           2
 F phenylalanine       3.1         11           1
 G glycine             7.3         26           2
 H histidine           1.7          6           1
 I isoleucine          6.2         22           2
 K lysine              5.9         21           1
 L leucine             8.2         29           2
 M methionine          0.6          2           1
 N asparagine          2.8         10           1
 P proline             8.2         29           2
 Q glutamine           5.4         19           1
 R arginine            5.4         19           2
 S serine              5.1         18           1
 T threonine           7.9         28           2
 V valine              6.2         22           1
 W tryptophan          1.7          6           1
 Y tyrosine            2.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin binding protein H-like 
MYBPH                 0.638   myosin binding protein H 
MYBPC1                0.499   myosin binding protein C, slow type isoform 4 
MYBPC1                0.499   myosin binding protein C, slow type isoform 3 
MYBPC1                0.499   myosin binding protein C, slow type isoform 2 
MYBPC1                0.499   myosin binding protein C, slow type isoform 1 
MYBPC3                0.454   myosin binding protein C, cardiac 
MYBPC2                0.452   myosin binding protein C, fast type 
IGFN1                 0.155   immunoglobulin-like and fibronectin type III domain...
IGSF22                0.145   immunoglobulin superfamily, member 22 
TTN                   0.125   titin isoform N2-A 
TTN                   0.125   titin isoform novex-2 
TTN                   0.125   titin isoform novex-1 
TTN                   0.125   titin isoform N2-B 
MYLK                  0.056   myosin light chain kinase isoform 3A 
MYLK                  0.056   myosin light chain kinase isoform 1 
MYLK                  0.056   myosin light chain kinase isoform 3B 
MYLK                  0.056   myosin light chain kinase isoform 2 
KALRN                 0.054   kalirin, RhoGEF kinase isoform 1 
KALRN                 0.054   kalirin, RhoGEF kinase isoform 3 
MYOM1                 0.053   myomesin 1 isoform b 
MYOM1                 0.053   myomesin 1 isoform a 
MYOM3                 0.051   myomesin family, member 3 
MYOM2                 0.051   myomesin 2 
OBSCN                 0.050   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.050   obscurin, cytoskeletal calmodulin and titin-interac...
CNTN3                 0.048   contactin 3 
HMCN1                 0.047   hemicentin 1 
BOC                   0.044   brother of CDO 
CNTN1                 0.043   contactin 1 isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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