Guide to the Human Genome
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Name: OR52B4 Sequence: fasta or formatted (314aa) NCBI GI: 94967012
Description:

olfactory receptor, family 52, subfamily B, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         16           1
 C cysteine            3.8         12           1
 D aspartate           2.5          8           1
 E glutamate           1.3          4           1
 F phenylalanine       7.6         24           2
 G glycine             4.8         15           1
 H histidine           4.8         15           1
 I isoleucine         15.0         47           3
 K lysine              3.2         10           2
 L leucine            12.1         38           2
 M methionine          2.9          9           1
 N asparagine          3.2         10           2
 P proline             5.1         16           2
 Q glutamine           3.5         11           1
 R arginine            2.9          9           1
 S serine              6.1         19           1
 T threonine           6.7         21           2
 V valine              5.1         16           2
 W tryptophan          1.0          3           1
 Y tyrosine            3.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily B, member 4... 
OR52B2                0.569   olfactory receptor, family 52, subfamily B, member 2...
OR52H1                0.519   olfactory receptor, family 52, subfamily H, member 1...
OR52E8                0.496   olfactory receptor, family 52, subfamily E, member 8...
OR52B6                0.485   olfactory receptor, family 52, subfamily B, member ...
OR52D1                0.483   olfactory receptor, family 52, subfamily D, member 1...
OR52E4                0.478   olfactory receptor, family 52, subfamily E, member 4...
OR52E6                0.459   olfactory receptor, family 52, subfamily E, member 6...
OR52N4                0.454   olfactory receptor, family 52, subfamily N, member ...
OR52E2                0.447   olfactory receptor, family 52, subfamily E, member 2...
OR51F2                0.447   olfactory receptor, family 51, subfamily F, member 2...
OR52J3                0.439   olfactory receptor, family 52, subfamily J, member ...
OR52N2                0.439   olfactory receptor, family 52, subfamily N, member 2...
OR52K2                0.438   olfactory receptor, family 52, subfamily K, member 2...
OR52K1                0.431   olfactory receptor, family 52, subfamily K, member 1...
OR52A5                0.428   olfactory receptor, family 52, subfamily A, member 5...
OR52N1                0.423   olfactory receptor, family 52, subfamily N, member 1...
OR52R1                0.423   olfactory receptor, family 52, subfamily R, member ...
OR52N5                0.412   olfactory receptor, family 52, subfamily N, member 5...
OR51G2                0.412   olfactory receptor, family 51, subfamily G, member 2...
OR51E2                0.410   olfactory receptor, family 51, subfamily E, member 2...
OR51E1                0.410   olfactory receptor, family 51, subfamily E, member ...
OR52M1                0.407   olfactory receptor, family 52, subfamily M, member 1...
OR52L1                0.402   olfactory receptor, family 52, subfamily L, member ...
OR51F1                0.402   olfactory receptor, family 51, subfamily F, member 1...
OR51G1                0.397   olfactory receptor, family 51, subfamily G, member 1...
OR51A4                0.394   olfactory receptor, family 51, subfamily A, member 4...
OR51L1                0.392   olfactory receptor, family 51, subfamily L, member 1...
OR51I2                0.392   olfactory receptor, family 51, subfamily I, member 2...
OR51V1                0.392   olfactory receptor, family 51, subfamily V, member ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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