Search of human proteins with 148238078

Search of human proteins with 148238078

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|148238078 ribonuclease P/MRP 38 subunit [Homo sapiens]
         (283 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148222745 ribonuclease P/MRP 38 subunit [Homo sapiens]             553   e-158
gi|33859837 ribonuclease P/MRP 38 subunit [Homo sapiens]              553   e-158
gi|148238078 ribonuclease P/MRP 38 subunit [Homo sapiens]             553   e-158
gi|45439370 TAO kinase 1 [Homo sapiens]                                34   0.17 
gi|153945728 microtubule-associated protein 1B [Homo sapiens]          34   0.17 
gi|4506661 ribosomal protein L7a [Homo sapiens]                        33   0.22 
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa...    32   0.82 
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa...    32   0.82 
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap...    32   0.82 
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik...    32   0.82 
gi|120952851 strumpellin [Homo sapiens]                                31   1.1  
gi|148839382 ring finger protein 169 [Homo sapiens]                    31   1.1  
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     31   1.4  
gi|205277396 dynactin 1 isoform 4 [Homo sapiens]                       30   1.8  
gi|205277392 dynactin 1 isoform 3 [Homo sapiens]                       30   1.8  
gi|13259508 dynactin 1 isoform 2 [Homo sapiens]                        30   1.8  
gi|13259510 dynactin 1 isoform 1 [Homo sapiens]                        30   1.8  
gi|217416392 pleckstrin homology domain containing, family H (wi...    30   1.8  
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo...    30   1.8  
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo...    30   1.8  
gi|51317376 NHP2 non-histone chromosome protein 2-like 1 [Homo s...    30   2.4  
gi|4826860 NHP2 non-histone chromosome protein 2-like 1 [Homo sa...    30   2.4  
gi|110349719 titin isoform N2-A [Homo sapiens]                         30   3.1  
gi|38044112 restin isoform b [Homo sapiens]                            30   3.1  
gi|4506751 restin isoform a [Homo sapiens]                             30   3.1  
gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens]      30   3.1  
gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens]      30   3.1  
gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens]      30   3.1  
gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]      30   3.1  
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]                    30   3.1  

>gi|148222745 ribonuclease P/MRP 38 subunit [Homo sapiens]
          Length = 283

 Score =  553 bits (1424), Expect = e-158
 Identities = 283/283 (100%), Positives = 283/283 (100%)

Query: 1   MAAAPQAPGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFILQTLEDRLKAIGLQKI 60
           MAAAPQAPGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFILQTLEDRLKAIGLQKI
Sbjct: 1   MAAAPQAPGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFILQTLEDRLKAIGLQKI 60

Query: 61  EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEV 120
           EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEV
Sbjct: 61  EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEV 120

Query: 121 TRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLKCVLAL 180
           TRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLKCVLAL
Sbjct: 121 TRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLKCVLAL 180

Query: 181 AFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGENLETEPLESQDRELLDTSFEDLS 240
           AFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGENLETEPLESQDRELLDTSFEDLS
Sbjct: 181 AFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGENLETEPLESQDRELLDTSFEDLS 240

Query: 241 KPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPKSKKATPK 283
           KPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPKSKKATPK
Sbjct: 241 KPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPKSKKATPK 283


>gi|33859837 ribonuclease P/MRP 38 subunit [Homo sapiens]
          Length = 283

 Score =  553 bits (1424), Expect = e-158
 Identities = 283/283 (100%), Positives = 283/283 (100%)

Query: 1   MAAAPQAPGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFILQTLEDRLKAIGLQKI 60
           MAAAPQAPGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFILQTLEDRLKAIGLQKI
Sbjct: 1   MAAAPQAPGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFILQTLEDRLKAIGLQKI 60

Query: 61  EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEV 120
           EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEV
Sbjct: 61  EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEV 120

Query: 121 TRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLKCVLAL 180
           TRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLKCVLAL
Sbjct: 121 TRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLKCVLAL 180

Query: 181 AFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGENLETEPLESQDRELLDTSFEDLS 240
           AFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGENLETEPLESQDRELLDTSFEDLS
Sbjct: 181 AFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGENLETEPLESQDRELLDTSFEDLS 240

Query: 241 KPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPKSKKATPK 283
           KPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPKSKKATPK
Sbjct: 241 KPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPKSKKATPK 283


>gi|148238078 ribonuclease P/MRP 38 subunit [Homo sapiens]
          Length = 283

 Score =  553 bits (1424), Expect = e-158
 Identities = 283/283 (100%), Positives = 283/283 (100%)

Query: 1   MAAAPQAPGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFILQTLEDRLKAIGLQKI 60
           MAAAPQAPGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFILQTLEDRLKAIGLQKI
Sbjct: 1   MAAAPQAPGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFILQTLEDRLKAIGLQKI 60

Query: 61  EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEV 120
           EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEV
Sbjct: 61  EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEV 120

Query: 121 TRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLKCVLAL 180
           TRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLKCVLAL
Sbjct: 121 TRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVIGLKCVLAL 180

Query: 181 AFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGENLETEPLESQDRELLDTSFEDLS 240
           AFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGENLETEPLESQDRELLDTSFEDLS
Sbjct: 181 AFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGENLETEPLESQDRELLDTSFEDLS 240

Query: 241 KPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPKSKKATPK 283
           KPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPKSKKATPK
Sbjct: 241 KPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPKSKKATPK 283


>gi|45439370 TAO kinase 1 [Homo sapiens]
          Length = 1001

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 1/98 (1%)

Query: 58  QKIEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQLAIGV 117
           Q I+ ++KK    FL+ + RE       + E L E ++  K++   W             
Sbjct: 538 QHIQAQQKKELNSFLESQKREYKLRKEQLKEELNENQSTPKKEKQEWLSKQKENIQHFQA 597

Query: 118 NEVTRALERRELLLVLVCKSVKPAMITS-HLIQLSLSR 154
            E    L R+   L L C+  K  M+   H ++  L R
Sbjct: 598 EEEANLLRRQRQYLELECRRFKRRMLLGRHNLEQDLVR 635


>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
          Length = 2468

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 49  EDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDISENL-KEKKTDAKQQVSGWT-P 106
           ED+ +     K E  KK++KTP  K+E  +K  +  ++ + + KE+K + K++V   T P
Sbjct: 647 EDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPP 706

Query: 107 AHVRKQL 113
             V+K++
Sbjct: 707 KEVKKEV 713


>gi|4506661 ribosomal protein L7a [Homo sapiens]
          Length = 266

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 16/133 (12%)

Query: 50  DRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHV 109
           DR  A  L K+  K +    P  K+E +++            EKK   K  V    P  +
Sbjct: 88  DRQTATQLLKLAHKYR----PETKQEKKQRLLARA-------EKKAAGKGDVPTKRPPVL 136

Query: 110 RKQLAIGVNEVTRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIA 169
           R     GVN VT  +E ++  LV++   V P  +   L  L     VP C + +   R+ 
Sbjct: 137 RA----GVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYC-IIKGKARLG 191

Query: 170 PVIGLKCVLALAF 182
            ++  K    +AF
Sbjct: 192 RLVHRKTCTTVAF 204


>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
           sapiens]
          Length = 750

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 14/90 (15%)

Query: 48  LEDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDI------SENLKEKKTDAKQQV 101
           LE  L A+  QK      K    ++++ ++E+ ++++++       E LKEK  +AK Q 
Sbjct: 177 LEQALSAVATQK------KKADRYIEELTKERDALSLELYRNTITDEELKEK--NAKLQE 228

Query: 102 SGWTPAHVRKQLAIGVNEVTRALERRELLL 131
                   + ++ + V E+ R LER +LLL
Sbjct: 229 KLQLVESEKSEIQLNVKELKRKLERAKLLL 258


>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
           sapiens]
          Length = 668

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 14/90 (15%)

Query: 48  LEDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDI------SENLKEKKTDAKQQV 101
           LE  L A+  QK      K    ++++ ++E+ ++++++       E LKEK  +AK Q 
Sbjct: 177 LEQALSAVATQK------KKADRYIEELTKERDALSLELYRNTITDEELKEK--NAKLQE 228

Query: 102 SGWTPAHVRKQLAIGVNEVTRALERRELLL 131
                   + ++ + V E+ R LER +LLL
Sbjct: 229 KLQLVESEKSEIQLNVKELKRKLERAKLLL 258


>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
           sapiens]
          Length = 570

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 14/90 (15%)

Query: 48  LEDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDI------SENLKEKKTDAKQQV 101
           LE  L A+  QK      K    ++++ ++E+ ++++++       E LKEK  +AK Q 
Sbjct: 165 LEQALSAVATQK------KKADRYIEELTKERDALSLELYRNTITDEELKEK--NAKLQE 216

Query: 102 SGWTPAHVRKQLAIGVNEVTRALERRELLL 131
                   + ++ + V E+ R LER +LLL
Sbjct: 217 KLQLVESEKSEIQLNVKELKRKLERAKLLL 246


>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
           protein 6 [Homo sapiens]
          Length = 724

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 14/90 (15%)

Query: 48  LEDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDI------SENLKEKKTDAKQQV 101
           LE  L A+  QK      K    ++++ ++E+ ++++++       E LKEK  +AK Q 
Sbjct: 238 LEQALSAVATQK------KKADRYIEELTKERDALSLELYRNTITDEELKEK--NAKLQE 289

Query: 102 SGWTPAHVRKQLAIGVNEVTRALERRELLL 131
                   + ++ + V E+ R LER +LLL
Sbjct: 290 KLQLVESEKSEIQLNVKELKRKLERAKLLL 319


>gi|120952851 strumpellin [Homo sapiens]
          Length = 1159

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 26/133 (19%), Positives = 59/133 (44%), Gaps = 11/133 (8%)

Query: 8   PGRGSLRKTRPLVVKTSLNNPYIIRWSALESEDMHFILQTLEDRLKAIGLQKIEDKKKKN 67
           P    LR+ +  ++  S  NP I+    L++    FIL+ +  ++ +         +K+ 
Sbjct: 387 PNNKRLRQIKDQILTDSRYNPRILFQLLLDTAQFEFILKEMFKQMLS---------EKQT 437

Query: 68  KTPFLKKESREKCSIAVDISENLKE-KKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALER 126
           K    KKE  E+ +   D+   +K   + +  + +  W     ++ L++  ++ T A  R
Sbjct: 438 KWEHYKKEGSERMTELADVFSGVKPLTRVEKNENLQAWFREISKQILSLNYDDST-AAGR 496

Query: 127 RELLLVLVCKSVK 139
           + + L+   + V+
Sbjct: 497 KTVQLIQALEEVQ 509


>gi|148839382 ring finger protein 169 [Homo sapiens]
          Length = 708

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 31/235 (13%)

Query: 56  GLQKIEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQ-QVSGWTPAHVRKQLA 114
           G +K++++KK+++ P + K + E+C   +  SEN +  +    Q   S +   +    LA
Sbjct: 219 GKRKMDEQKKRDE-PLVLKTNLERCPARLSDSENEEPSRGQMTQTHRSAFVSKNNSYSLA 277

Query: 115 IGVNEVTRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPA--CQVPRLSERIAPVI 172
               ++   +ER +      C         S +      R+VP    +V  ++    P+I
Sbjct: 278 FLAGKLNSKVERSQ-----SCSDTAQERAKSRV------RAVPGNKAKVTTMTPASNPII 326

Query: 173 GLKCVLALAFKKNTTDFVDEVRAIIPRVPSLSVPWLQDRIEDSGENLETEPLESQDRELL 232
           G    + L+ + N      ++  I  R+P  S+  L   +     ++  E  +S   EL 
Sbjct: 327 G----VLLSTQNNRCVSAPDL-TIEKRLPFSSLSSLAS-LHKPERSVSPESNDSISEEL- 379

Query: 233 DTSFEDL----SKPKRKLADGRQASVTLQPLKIKKLIPNPNKIRKPPKSKKATPK 283
              F+ +      P ++L DGR     L PL IK    N N+  +   S +A+P+
Sbjct: 380 -NHFKPIVCSPCTPPKRLPDGR----VLSPLIIKSTPRNLNRSLQKQTSYEASPR 429


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 23/85 (27%), Positives = 39/85 (45%)

Query: 40   DMHFILQTLEDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQ 99
            D+  ++   E   K  G Q+    +K++    LKKE  E  +    + E LKEKK +   
Sbjct: 1312 DIESLVTEKEALQKEGGNQQQAASEKESCITQLKKELSENINAVTLMKEELKEKKVEISS 1371

Query: 100  QVSGWTPAHVRKQLAIGVNEVTRAL 124
                 T  +V+ Q +I ++E   A+
Sbjct: 1372 LSKQLTDLNVQLQNSISLSEKEAAI 1396


>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
          Length = 1139

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 62/236 (26%)

Query: 37  ESEDMHFILQTLEDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTD 96
           E E +   ++ LE++L+ + L++ EDK K      LK+  + K  +     E ++E K+ 
Sbjct: 82  EEEGLRAQVRDLEEKLETLRLKRAEDKAK------LKELEKHKIQL-----EQVQEWKSK 130

Query: 97  AKQQVSGWTPAHVRKQLAIGVNEVTRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSV 156
            ++Q      A ++++L     E   ALE +E  +                    ++ + 
Sbjct: 131 MQEQ-----QADLQRRLKEARKEAKEALEAKERYME------------------EMADTA 167

Query: 157 PACQVPRLSERIAPVIGLKCVLALAFKKNTTDFVDEVRAIIPRVPSLS--VPWLQDRIED 214
            A ++  L + +A             ++       EV A+  RV  L+  +  L+  IE+
Sbjct: 168 DAIEMATLDKEMA-------------EERAESLQQEVEALKERVDELTTDLEILKAEIEE 214

Query: 215 SG-----ENLETEPLESQDRELLD--TSFEDLSKPKRKLADGRQASVTLQPLKIKK 263
            G      + + + LE Q+  L D      DLS  +      +Q  V LQ L  KK
Sbjct: 215 KGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSE------KQEHVKLQKLMEKK 264


>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
          Length = 1253

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 62/236 (26%)

Query: 37  ESEDMHFILQTLEDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTD 96
           E E +   ++ LE++L+ + L++ EDK K      LK+  + K  +     E ++E K+ 
Sbjct: 196 EEEGLRAQVRDLEEKLETLRLKRAEDKAK------LKELEKHKIQL-----EQVQEWKSK 244

Query: 97  AKQQVSGWTPAHVRKQLAIGVNEVTRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSV 156
            ++Q      A ++++L     E   ALE +E  +                    ++ + 
Sbjct: 245 MQEQ-----QADLQRRLKEARKEAKEALEAKERYME------------------EMADTA 281

Query: 157 PACQVPRLSERIAPVIGLKCVLALAFKKNTTDFVDEVRAIIPRVPSLS--VPWLQDRIED 214
            A ++  L + +A             ++       EV A+  RV  L+  +  L+  IE+
Sbjct: 282 DAIEMATLDKEMA-------------EERAESLQQEVEALKERVDELTTDLEILKAEIEE 328

Query: 215 SG-----ENLETEPLESQDRELLD--TSFEDLSKPKRKLADGRQASVTLQPLKIKK 263
            G      + + + LE Q+  L D      DLS  +      +Q  V LQ L  KK
Sbjct: 329 KGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSE------KQEHVKLQKLMEKK 378


>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
          Length = 1144

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 62/236 (26%)

Query: 37  ESEDMHFILQTLEDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTD 96
           E E +   ++ LE++L+ + L++ EDK K      LK+  + K  +     E ++E K+ 
Sbjct: 82  EEEGLRAQVRDLEEKLETLRLKRAEDKAK------LKELEKHKIQL-----EQVQEWKSK 130

Query: 97  AKQQVSGWTPAHVRKQLAIGVNEVTRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSV 156
            ++Q      A ++++L     E   ALE +E  +                    ++ + 
Sbjct: 131 MQEQ-----QADLQRRLKEARKEAKEALEAKERYME------------------EMADTA 167

Query: 157 PACQVPRLSERIAPVIGLKCVLALAFKKNTTDFVDEVRAIIPRVPSLS--VPWLQDRIED 214
            A ++  L + +A             ++       EV A+  RV  L+  +  L+  IE+
Sbjct: 168 DAIEMATLDKEMA-------------EERAESLQQEVEALKERVDELTTDLEILKAEIEE 214

Query: 215 SG-----ENLETEPLESQDRELLD--TSFEDLSKPKRKLADGRQASVTLQPLKIKK 263
            G      + + + LE Q+  L D      DLS  +      +Q  V LQ L  KK
Sbjct: 215 KGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSE------KQEHVKLQKLMEKK 264


>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
          Length = 1278

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 62/236 (26%)

Query: 37  ESEDMHFILQTLEDRLKAIGLQKIEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTD 96
           E E +   ++ LE++L+ + L++ EDK K      LK+  + K  +     E ++E K+ 
Sbjct: 216 EEEGLRAQVRDLEEKLETLRLKRAEDKAK------LKELEKHKIQL-----EQVQEWKSK 264

Query: 97  AKQQVSGWTPAHVRKQLAIGVNEVTRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSV 156
            ++Q      A ++++L     E   ALE +E  +                    ++ + 
Sbjct: 265 MQEQ-----QADLQRRLKEARKEAKEALEAKERYME------------------EMADTA 301

Query: 157 PACQVPRLSERIAPVIGLKCVLALAFKKNTTDFVDEVRAIIPRVPSLS--VPWLQDRIED 214
            A ++  L + +A             ++       EV A+  RV  L+  +  L+  IE+
Sbjct: 302 DAIEMATLDKEMA-------------EERAESLQQEVEALKERVDELTTDLEILKAEIEE 348

Query: 215 SG-----ENLETEPLESQDRELLD--TSFEDLSKPKRKLADGRQASVTLQPLKIKK 263
            G      + + + LE Q+  L D      DLS  +      +Q  V LQ L  KK
Sbjct: 349 KGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSE------KQEHVKLQKLMEKK 398


>gi|217416392 pleckstrin homology domain containing, family H (with
           MyTH4 domain) member 2 [Homo sapiens]
          Length = 1493

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 5/91 (5%)

Query: 45  LQTLEDRLKAIGLQKIEDKKK-KNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQ--V 101
           +Q +ED+LKA  +Q  E + +  NK   L+   +EK  +  ++   L+E+K    Q+  +
Sbjct: 63  VQVMEDKLKAANIQTSESETRLYNKCQDLESLIQEKDDVIQNLELQLEEQKQIRIQEAKI 122

Query: 102 SGWTPAHVRKQLAIGVNEVTRALERRELLLV 132
                A +++ + + +NE+   LE + L L+
Sbjct: 123 IEEKAAKIKEWVTVKLNEL--ELENQNLRLI 151


>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
           sapiens]
          Length = 1272

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 61  EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQL 113
           E+KKK  +    K+E + K     + +  +KEK+   +     W   H+RK+L
Sbjct: 92  EEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQEAWERHHLRKEL 144


>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
           sapiens]
          Length = 1272

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 61  EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDAKQQVSGWTPAHVRKQL 113
           E+KKK  +    K+E + K     + +  +KEK+   +     W   H+RK+L
Sbjct: 92  EEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQEAWERHHLRKEL 144


>gi|51317376 NHP2 non-histone chromosome protein 2-like 1 [Homo
           sapiens]
          Length = 128

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 89  NLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRELLLVLVCKSVKPAMITSHLI 148
           +L +K  D  QQ   +      KQL  G NE T+ L R     +++    +P  I  HL 
Sbjct: 17  HLTKKLLDLVQQSCNY------KQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLP 70

Query: 149 QLSLSRSVP 157
            L   ++VP
Sbjct: 71  LLCEDKNVP 79


>gi|4826860 NHP2 non-histone chromosome protein 2-like 1 [Homo
           sapiens]
          Length = 128

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 89  NLKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRELLLVLVCKSVKPAMITSHLI 148
           +L +K  D  QQ   +      KQL  G NE T+ L R     +++    +P  I  HL 
Sbjct: 17  HLTKKLLDLVQQSCNY------KQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLP 70

Query: 149 QLSLSRSVP 157
            L   ++VP
Sbjct: 71  LLCEDKNVP 79


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 7/119 (5%)

Query: 61   EDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTDA----KQQVSG---WTPAHVRKQL 113
            E+K +  K P + K+   +      + E + E K  A    K  +S    +  +H  +++
Sbjct: 9198 EEKVQVTKVPEVSKKIVPQKPSRTPVQEEVIEVKVPAVHTKKMVISEEKMFFASHTEEEV 9257

Query: 114  AIGVNEVTRALERRELLLVLVCKSVKPAMITSHLIQLSLSRSVPACQVPRLSERIAPVI 172
            ++ V EV + +   E + V + K V+P      L +      V    +P+  E  AP +
Sbjct: 9258 SVTVPEVQKEIVTEEKIHVAISKRVEPPPKVPELPEKPAPEEVAPVPIPKKVEPPAPKV 9316


>gi|38044112 restin isoform b [Homo sapiens]
          Length = 1392

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 13/119 (10%)

Query: 34   SALESEDMHFILQTLEDRLKAIGLQKIEDKK----------KKNKTPFLKKESREKCSIA 83
            SAL+ E++    +    R +    QK+E+++          KK ++ F+K    EK S+ 
Sbjct: 1127 SALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQ 1186

Query: 84   VDISEN---LKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRELLLVLVCKSVK 139
              IS     L EK  + ++  +  T        A  ++ V + LE  ++ L L  K+++
Sbjct: 1187 KSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLE 1245


>gi|4506751 restin isoform a [Homo sapiens]
          Length = 1427

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 13/119 (10%)

Query: 34   SALESEDMHFILQTLEDRLKAIGLQKIEDKK----------KKNKTPFLKKESREKCSIA 83
            SAL+ E++    +    R +    QK+E+++          KK ++ F+K    EK S+ 
Sbjct: 1162 SALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKASLQ 1221

Query: 84   VDISEN---LKEKKTDAKQQVSGWTPAHVRKQLAIGVNEVTRALERRELLLVLVCKSVK 139
              IS     L EK  + ++  +  T        A  ++ V + LE  ++ L L  K+++
Sbjct: 1222 KSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSVVQTLESDKVKLELKVKNLE 1280


>gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens]
          Length = 1160

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 60  IEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTD 96
           + DKKK    PF+ +E+ E+    +DI  NL+++K +
Sbjct: 667 VSDKKKDMSPPFICEETDEQKLQTLDIGSNLEKEKLE 703


>gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens]
          Length = 1160

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 60  IEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTD 96
           + DKKK    PF+ +E+ E+    +DI  NL+++K +
Sbjct: 667 VSDKKKDMSPPFICEETDEQKLQTLDIGSNLEKEKLE 703


>gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens]
          Length = 1196

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 60  IEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTD 96
           + DKKK    PF+ +E+ E+    +DI  NL+++K +
Sbjct: 667 VSDKKKDMSPPFICEETDEQKLQTLDIGSNLEKEKLE 703


>gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]
          Length = 1231

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)

Query: 60  IEDKKKKNKTPFLKKESREKCSIAVDISENLKEKKTD 96
           + DKKK    PF+ +E+ E+    +DI  NL+++K +
Sbjct: 702 VSDKKKDMSPPFICEETDEQKLQTLDIGSNLEKEKLE 738


>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
          Length = 1780

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 15/87 (17%)

Query: 39   EDMHFILQTLEDRLKAIGLQKIEDKKKKNKTPFLKKE----SREKCSIAVDISE------ 88
            E++  +   L+D    + L++ E++  + +T  LK+E    S    ++  D+        
Sbjct: 1187 EEITQLTNNLQDMKHLLQLKEEEEETNRQETEKLKEELSASSARTQNLKADLQRKEEDYA 1246

Query: 89   NLKEKKTDAKQQVSGWTPAHVRKQLAI 115
            +LKEK TDAK+Q+       V+K++++
Sbjct: 1247 DLKEKLTDAKKQIK-----QVQKEVSV 1268


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,780,265
Number of Sequences: 37866
Number of extensions: 471551
Number of successful extensions: 1950
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1915
Number of HSP's gapped (non-prelim): 61
length of query: 283
length of database: 18,247,518
effective HSP length: 101
effective length of query: 182
effective length of database: 14,423,052
effective search space: 2624995464
effective search space used: 2624995464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.