Guide to the Human Genome
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Name: RPL7A Sequence: fasta or formatted (266aa) NCBI GI: 4506661
Description:

ribosomal protein L7a

Referenced in:

Ribosomes
Small RNAs in RNA Processing
Thyroid and Thyroid Hormone Receptor

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         28           2
 C cysteine            1.1          3           1
 D aspartate           3.4          9           1
 E glutamate           4.5         12           1
 F phenylalanine       2.3          6           1
 G glycine             5.6         15           2
 H histidine           1.5          4           1
 I isoleucine          4.5         12           2
 K lysine             14.7         39           2
 L leucine             9.4         25           2
 M methionine          0.8          2           1
 N asparagine          3.4          9           1
 P proline             6.4         17           2
 Q glutamine           4.9         13           1
 R arginine            8.6         23           2
 S serine              0.8          2           1
 T threonine           5.6         15           2
 V valine              9.0         24           2
 W tryptophan          0.8          2           1
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L7a 
LOC100292301          0.058   PREDICTED: similar to hCG1993567 
NHP2L1                0.050   NHP2 non-histone chromosome protein 2-like 1 
NHP2L1                0.050   NHP2 non-histone chromosome protein 2-like 1 
LOC643630             0.044   PREDICTED: similar to hCG1993567 
LOC100132161          0.044   PREDICTED: similar to hCG1993567 
LOC100132167          0.044   PREDICTED: similar to hCG1993567 
NHP2                  0.042   nucleolar protein family A, member 2 isoform a 
RPP38                 0.016   ribonuclease P/MRP 38 subunit 
RPP38                 0.016   ribonuclease P/MRP 38 subunit 
RPP38                 0.016   ribonuclease P/MRP 38 subunit 
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.012   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
SECISBP2L             0.012   SECIS binding protein 2-like 
PARP1                 0.010   poly (ADP-ribose) polymerase family, member 1 [Homo...
PPP1R16A              0.008   protein phosphatase 1, regulatory (inhibitor) subuni...
SDCCAG1               0.006   serologically defined colon cancer antigen 1 
ODZ2                  0.006   odz, odd Oz/ten-m homolog 2 
SUPT6H                0.006   suppressor of Ty 6 homolog 
BAZ2A                 0.006   bromodomain adjacent to zinc finger domain, 2A [Homo...
CHD9                  0.006   chromodomain helicase DNA binding protein 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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