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Search of human proteins with 148233642
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148233642 hypothetical protein LOC283897 [Homo sapiens]
(224 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148233642 hypothetical protein LOC283897 [Homo sapiens] 474 e-134
gi|151101459 SAPS domain family, member 1 [Homo sapiens] 41 7e-04
gi|41281612 zinc finger protein 828 [Homo sapiens] 41 0.001
gi|6912492 mitogen-activated protein kinase 8 interacting protei... 40 0.001
gi|7706537 mitogen-activated protein kinase 8 interacting protei... 40 0.001
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 40 0.002
gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo sa... 39 0.003
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ... 39 0.005
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 39 0.005
gi|23957680 ral guanine nucleotide dissociation stimulator-like ... 39 0.005
gi|18079216 CASK interacting protein 1 [Homo sapiens] 38 0.006
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 38 0.006
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 38 0.008
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 38 0.008
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 38 0.008
gi|194306623 immunoglobulin superfamily containing leucine-rich ... 38 0.008
gi|194306621 immunoglobulin superfamily containing leucine-rich ... 38 0.008
gi|39930401 immunoglobulin superfamily containing leucine-rich r... 38 0.008
gi|194306618 immunoglobulin superfamily containing leucine-rich ... 38 0.008
gi|11641239 hypothetical protein LOC53838 [Homo sapiens] 38 0.008
gi|144922631 tigger transposable element derived 5 [Homo sapiens] 38 0.008
gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo ... 37 0.010
gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo ... 37 0.010
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 37 0.014
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 37 0.014
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ... 37 0.018
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 36 0.023
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 36 0.030
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 36 0.030
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 36 0.030
>gi|148233642 hypothetical protein LOC283897 [Homo sapiens]
Length = 224
Score = 474 bits (1221), Expect = e-134
Identities = 224/224 (100%), Positives = 224/224 (100%)
Query: 1 MPLTPEPPSGRVEGPPAWEAAPWPSLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRA 60
MPLTPEPPSGRVEGPPAWEAAPWPSLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRA
Sbjct: 1 MPLTPEPPSGRVEGPPAWEAAPWPSLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRA 60
Query: 61 LRPDPSHRAPTLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEAR 120
LRPDPSHRAPTLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEAR
Sbjct: 61 LRPDPSHRAPTLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEAR 120
Query: 121 ATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATGLVSWAEPEQRPEASV 180
ATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATGLVSWAEPEQRPEASV
Sbjct: 121 ATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATGLVSWAEPEQRPEASV 180
Query: 181 QFGSPQARRQRPGSPDPEWGLQPRVTLEQISAFWKREGRTSVGF 224
QFGSPQARRQRPGSPDPEWGLQPRVTLEQISAFWKREGRTSVGF
Sbjct: 181 QFGSPQARRQRPGSPDPEWGLQPRVTLEQISAFWKREGRTSVGF 224
>gi|151101459 SAPS domain family, member 1 [Homo sapiens]
Length = 881
Score = 41.2 bits (95), Expect = 7e-04
Identities = 37/110 (33%), Positives = 42/110 (38%), Gaps = 10/110 (9%)
Query: 95 WYGSAVPLLTDRAPEPPTQVGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTF--- 151
W + P+ TD AP P G E T PPAP P S P L Q++ PAR
Sbjct: 712 WTATFDPVPTD-APTSPRVSGEEELH-TGPPAPQGPLSVPQGLPTQSLASPPARDALQLR 769
Query: 152 -WGPQPWEGRPPATGLVSWAEPEQRPEASVQFGSPQAR----RQRPGSPD 196
P P AT EP +A V G QA R P S D
Sbjct: 770 SQDPTPPSAPQEATEGSKVTEPSAPCQALVSIGDLQATFHGIRSAPSSSD 819
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 40.8 bits (94), Expect = 0.001
Identities = 42/168 (25%), Positives = 62/168 (36%), Gaps = 33/168 (19%)
Query: 60 ALRPDPSHRAPTLV---WRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQVGT 116
A+ P+P AP + W+PG P G+ R + S+ P + P P G
Sbjct: 295 AVSPEPRRPAPAVSPGSWKPG------PPGSPRPWKSNPSASSGPWKPAK-PAPSVSPGP 347
Query: 117 LEARATAPPAPSAPNSA-------PSNLGPQTVLEVPARSTFW--------------GPQ 155
+ + P P P + S++ P + PA W P+
Sbjct: 348 WKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELRKTAPTLSPE 407
Query: 156 PWEGRPPATGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDPEWGLQP 203
W+ PP + + P PE GSP+ R+ GSPD W L P
Sbjct: 408 HWKAVPPVSPELRKPGPPLSPEIRSPAGSPELRKP-SGSPD-LWKLSP 453
Score = 40.0 bits (92), Expect = 0.002
Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 32/125 (25%)
Query: 107 APEPPTQVGTLEARATAP--------PAPSAPNSA---------------PSNLGPQTVL 143
+PEPP V E++ AP PAP +P S P LGP +
Sbjct: 184 SPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSAS 243
Query: 144 EVPARSTFWGPQPWEGRPPATGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDPEWGLQP 203
+ P+PW P A+ PE R A SP+ R+ P W P
Sbjct: 244 SPESPVLAASPEPWGPSPAAS-------PESRKSARTT--SPEPRKPSPSESPEPWKPFP 294
Query: 204 RVTLE 208
V+ E
Sbjct: 295 AVSPE 299
>gi|6912492 mitogen-activated protein kinase 8 interacting protein 2
isoform 1 [Homo sapiens]
Length = 824
Score = 40.4 bits (93), Expect = 0.001
Identities = 38/130 (29%), Positives = 49/130 (37%), Gaps = 17/130 (13%)
Query: 75 RPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEARATAPPAPSAPNSAP 134
RP GE + P G A + S+D +A P V A PPAP+AP P
Sbjct: 378 RPPGEP-VSPAGGAAQDSQDPEAAA-------GPGGVELVDMETLCAPPPPAPAAPRPGP 429
Query: 135 SNLGPQTVLEVPARST---FWGPQPWEGRPPATGLVSWAE------PEQRPEASVQFGSP 185
+ GP L P R T W RP + +E E+ +A GSP
Sbjct: 430 AQPGPCLFLSNPTRDTITPLWAAPGRAARPGRACSAACSEEEDEEDDEEEEDAEDSAGSP 489
Query: 186 QARRQRPGSP 195
R P +P
Sbjct: 490 GGRGTGPSAP 499
>gi|7706537 mitogen-activated protein kinase 8 interacting protein 2
isoform 2 [Homo sapiens]
Length = 797
Score = 40.4 bits (93), Expect = 0.001
Identities = 38/130 (29%), Positives = 49/130 (37%), Gaps = 17/130 (13%)
Query: 75 RPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEARATAPPAPSAPNSAP 134
RP GE + P G A + S+D +A P V A PPAP+AP P
Sbjct: 351 RPPGEP-VSPAGGAAQDSQDPEAAA-------GPGGVELVDMETLCAPPPPAPAAPRPGP 402
Query: 135 SNLGPQTVLEVPARST---FWGPQPWEGRPPATGLVSWAE------PEQRPEASVQFGSP 185
+ GP L P R T W RP + +E E+ +A GSP
Sbjct: 403 AQPGPCLFLSNPTRDTITPLWAAPGRAARPGRACSAACSEEEDEEDDEEEEDAEDSAGSP 462
Query: 186 QARRQRPGSP 195
R P +P
Sbjct: 463 GGRGTGPSAP 472
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 39.7 bits (91), Expect = 0.002
Identities = 51/182 (28%), Positives = 71/182 (39%), Gaps = 49/182 (26%)
Query: 9 SGRVEGPPAWEAAPWPSLP-CGPCIPIMLVLATLAALFILTTAVLAERLFRRALRPDPSH 67
+GR G PAW+ A P P P P L+T + L ++ S
Sbjct: 517 AGRGGGAPAWQPASAPPAPHANPSNPFYEALSTPSVLPVI------------------SA 558
Query: 68 RAPTLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEP--PTQVGTLEARATAPP 125
R+P++ E +I R E+ +GS PEP P L+ AP
Sbjct: 559 RSPSV----SSEYYI--------RLEE-HGSP--------PEPLFPNDWDPLDPGVPAPQ 597
Query: 126 APSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATG--LVSWAEPEQRPEASVQFG 183
AP AP+ P Q V E A F P+P+ + A+G L+S +PE R G
Sbjct: 598 APQAPSEVP-----QLVSETWASPLFPAPRPFPAQSSASGSFLLSGWDPEGRGAGETLAG 652
Query: 184 SP 185
P
Sbjct: 653 DP 654
Score = 28.1 bits (61), Expect = 6.3
Identities = 36/124 (29%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 84 PMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEARATAPPAPS--------APNSAPS 135
P E + G+A P R P P RA A PA S +P S S
Sbjct: 754 PASAPPEFLDPLMGAAAPQYPGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLS 813
Query: 136 NLGPQTVLEVPARSTFWGPQPW--EGRPPATGLVSWAEPEQRPEASVQFGSPQARRQRPG 193
+ GP+ P S + P+ EG P G E RP A + P A R P
Sbjct: 814 SPGPK-----PGDSGYETETPFSPEGAFPGGGAAE-EEGVPRPRAPPEPPDPGAPRP-PP 866
Query: 194 SPDP 197
P P
Sbjct: 867 DPGP 870
>gi|21389423 junctional sarcoplasmic reticulum protein 1 [Homo
sapiens]
Length = 331
Score = 39.3 bits (90), Expect = 0.003
Identities = 57/227 (25%), Positives = 78/227 (34%), Gaps = 61/227 (26%)
Query: 2 PLTPEPPSGRVEGPPAW-EAAPWPSLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRA 60
PL P PP PPA E PW L C+ + ++A L + F L + +A
Sbjct: 103 PLQPPPP------PPALSEELPWGDLSLNKCLVLASLVALLGSAFQLCRDAVPGEAALQA 156
Query: 61 LRPDPSHRAPTLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEAR 120
P+P W+ P RE S PL A PP+
Sbjct: 157 RVPEP---------------WVPPSSAPREPSS-------PLPKFEAQAPPS-------- 186
Query: 121 ATAPPAPSA-----PNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATGLVSWAE--PE 173
APPAP A P S + E P +T G V+ A+ P+
Sbjct: 187 --APPAPRAEAEVRPKIPGSREAAENDEEEPGEAT--------GEAVREDRVTLADRGPK 236
Query: 174 QRPEASVQFGSPQ----ARRQRPGSPDPEWGLQPRVTLEQISAFWKR 216
+RP G P+ + +RP P +PR E A +R
Sbjct: 237 ERPRRE---GKPRKEKPRKEERPKKERPRKEERPRAAREPREALPQR 280
>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
sapiens]
Length = 776
Score = 38.5 bits (88), Expect = 0.005
Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 10/96 (10%)
Query: 102 LLTDRAPEPPTQVGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRP 161
+ T R PP Q G A P AP + PS+ Q P GP+ G P
Sbjct: 468 IATPRGAAPPGQKGQANATRIPAKTPPAPKTPPSSATKQVQRRPPPA----GPRSERGEP 523
Query: 162 PATGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDP 197
P +G S P G+P +R + P P P
Sbjct: 524 PKSGDRSGYSSPGSP------GTPGSRSRTPSLPTP 553
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 38.5 bits (88), Expect = 0.005
Identities = 33/104 (31%), Positives = 40/104 (38%), Gaps = 19/104 (18%)
Query: 107 APEPPTQ------VGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGR 160
APEPPTQ V L+ R + P P P+ PS L P P P
Sbjct: 4885 APEPPTQHSYTYNVSNLDVRQLSAPPPEEPSPPPSPLAPSPA-SPPTEPLVELPTEPLAE 4943
Query: 161 PPATGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDPEWGLQPR 204
PP P P AS SP++ R +P + PE G R
Sbjct: 4944 PPV--------PSPLPLAS----SPESARPKPRARPPEEGEDSR 4975
Score = 28.5 bits (62), Expect = 4.9
Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 27/132 (20%)
Query: 98 SAVPLLTDRAPEPPTQVGT-----LEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTF- 151
+A P + +P P + T L+ A + P P +P L PQ +VP++ F
Sbjct: 2119 AAAPTIFIGSPTTPAGLSTSADGFLKPPAGSVPGPDSPGELFLKLPPQVPAQVPSQDPFG 2178
Query: 152 ------------WGPQPWEGRPPATG-------LVSWAEPEQRPEASVQFGSPQARRQRP 192
P + P TG L + + P P R +P
Sbjct: 2179 LAPAYPLEPRFPTAPPTYPPYPSPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPRHQP 2238
Query: 193 GSPDPEWGLQPR 204
+PDP L+PR
Sbjct: 2239 STPDP--FLKPR 2248
Score = 27.7 bits (60), Expect = 8.3
Identities = 29/105 (27%), Positives = 35/105 (33%), Gaps = 16/105 (15%)
Query: 104 TDRAPEPPTQVGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPA--RSTFWGPQPWEGRP 161
TD +PP L R PP S P +L VPA +S P RP
Sbjct: 2375 TDPYAQPP-----LTPRPQPPPPESCCALPPRSLPSDPFSRVPASPQSQSSSQSPLTPRP 2429
Query: 162 ---------PATGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDP 197
P T +P RP + Q P A +P P P
Sbjct: 2430 LSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQP 2474
>gi|23957680 ral guanine nucleotide dissociation stimulator-like 4
[Homo sapiens]
Length = 473
Score = 38.5 bits (88), Expect = 0.005
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 13/112 (11%)
Query: 105 DRAPEPPTQVGTLEARATAPP-----APSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEG 159
D AP P T+ A APP P+ +P+ LGP L P P EG
Sbjct: 125 DPAPRPGQHALTMPALEPAPPLLADLGPALEPESPAALGPPGYLHSAPGPA---PAPGEG 181
Query: 160 RPPATGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDPEWGLQPRVTLEQIS 211
PP T L EP+ PE+S + PD PR+ EQ++
Sbjct: 182 PPPGTVL----EPQSAPESSCPCRGSVKNQPSEELPDMT-TFPPRLLAEQLT 228
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 38.1 bits (87), Expect = 0.006
Identities = 63/233 (27%), Positives = 88/233 (37%), Gaps = 40/233 (17%)
Query: 5 PEPP---------SGRVEGPPAWEAAPWPSLPCGP--CIPIMLVLATLAALFILTTAVLA 53
PEPP +G V PA E A P LP P P LA L L
Sbjct: 1161 PEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPL------PPP 1214
Query: 54 ERLFRRALRPDPSHRAPTLVWRPGGELWIEPMGTARERSEDWYGS--------AVPLLTD 105
E R+ +P S + P L +P +L P T+++ GS P ++
Sbjct: 1215 EGEARKPAKPPVSPK-PVLT-QPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPPVSP 1272
Query: 106 RAPEPPTQVGTLEARATAPPAPSAPNSAPS--NLGPQTVLEVPARSTFWGPQPWEGRPPA 163
+ P PPT ++A A P + P+ APS P + + P G P +PP+
Sbjct: 1273 KPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASP--AKPPS 1330
Query: 164 TGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDPEWGLQP----RVTLEQISA 212
G + P + P A+ + A P P G P R LE+ SA
Sbjct: 1331 PGAPALHVPAKPPRAAAAAAAAAA-----APPAPPEGASPGDSARQKLEETSA 1378
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 38.1 bits (87), Expect = 0.006
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 12/124 (9%)
Query: 85 MGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEARATAPPAPSAPNSAPSNLGPQTVLE 144
+ +A+ +ED P + PE G + + T PP P P P G Q+
Sbjct: 13 LSSAQSLNEDVSQEESPSVISGKPEGRRPQGGNQPQRTPPP-PGKPEGRPPQGGNQSQGP 71
Query: 145 VPARSTFWGPQPW-----EGRPPATGLVSWAEPE-QRPEASVQFGSPQARRQRPGSPDPE 198
P GP P +G PP G +PE Q P+ Q P R +P P P+
Sbjct: 72 PPRPGKPEGPPPQGGNQSQGPPPRPG-----KPEGQPPQGGNQSQGPPPRPGKPEGPPPQ 126
Query: 199 WGLQ 202
G Q
Sbjct: 127 GGNQ 130
Score = 33.9 bits (76), Expect = 0.12
Identities = 30/100 (30%), Positives = 37/100 (37%), Gaps = 8/100 (8%)
Query: 108 PEPPTQVGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEG----RPPA 163
PE P G +++ PP P P PS G + P GP P EG RPP
Sbjct: 204 PEGPPPQGGNQSQGP-PPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPP 262
Query: 164 TGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDPEWGLQP 203
G P P + Q P + G P P G +P
Sbjct: 263 PGRPQGPPP---PGGNPQQPLPPPAGKPQGPPPPPQGGRP 299
Score = 31.2 bits (69), Expect = 0.75
Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 14/104 (13%)
Query: 108 PEPPTQVGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATGLV 167
PE P G +++ PP P P P G Q+ P P EG PP G
Sbjct: 162 PEGPPPQGGNQSQGP-PPHPGKPEGPPPQGGNQSQGPPPR------PGKPEGPPPQGGNQ 214
Query: 168 SWAEPEQ--RPEASVQFG--SPQARRQRPGSPD---PEWGLQPR 204
S P + +PE G PQ PG P P+ G +P+
Sbjct: 215 SQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQ 258
Score = 30.4 bits (67), Expect = 1.3
Identities = 25/85 (29%), Positives = 31/85 (36%), Gaps = 11/85 (12%)
Query: 124 PPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPW-----EGRPPATGLVSWAEPE-QRPE 177
PP P P P G Q+ P GP P +G PP G +PE P+
Sbjct: 114 PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG-----KPEGPPPQ 168
Query: 178 ASVQFGSPQARRQRPGSPDPEWGLQ 202
Q P +P P P+ G Q
Sbjct: 169 GGNQSQGPPPHPGKPEGPPPQGGNQ 193
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 37.7 bits (86), Expect = 0.008
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 107 APEPPTQVGTLEARATAPPA-PSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATG 165
AP P G L AR ++PP PS P+ GP + P S P+P RP G
Sbjct: 111 APSP----GPLPARPSSPPPRPSLPS------GPHRPVLPP--SALAAPRPPLARPLPQG 158
Query: 166 LVSWAEPEQRPEASVQFGSPQA 187
V+ E EQRP + + G+P+A
Sbjct: 159 SVTAREQEQRPRSRRRAGAPEA 180
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 37.7 bits (86), Expect = 0.008
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 107 APEPPTQVGTLEARATAPPA-PSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATG 165
AP P G L AR ++PP PS P+ GP + P S P+P RP G
Sbjct: 111 APSP----GPLPARPSSPPPRPSLPS------GPHRPVLPP--SALAAPRPPLARPLPQG 158
Query: 166 LVSWAEPEQRPEASVQFGSPQA 187
V+ E EQRP + + G+P+A
Sbjct: 159 SVTAREQEQRPRSRRRAGAPEA 180
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 37.7 bits (86), Expect = 0.008
Identities = 51/185 (27%), Positives = 64/185 (34%), Gaps = 41/185 (22%)
Query: 2 PLTPEPPSGRVEGP-PAWEAAPWPSLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRA 60
P P PPS P PA PSLP P P L L+ L
Sbjct: 867 PAVPTPPSMSAALPFPAGGLGMPPSLPPPPLQPPSLPLSMGPVL---------------- 910
Query: 61 LRPDP-SHRAPTLVW------RPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQ 113
PDP +H AP W P G + P T VPL++ P
Sbjct: 911 --PDPFTHYAPLPSWPCYPHVSPSGYPCLPPPPT------------VPLVSG-TPGAYAV 955
Query: 114 VGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATGLVSWAEPE 173
T PPAP +P S+ GP P + FW P PPA+ + A P+
Sbjct: 956 PPTCSVPWAPPPAPVSPYSSTCTYGPLGWGPGPQHAPFWSTVPPPPLPPAS--IGRAVPQ 1013
Query: 174 QRPEA 178
+ E+
Sbjct: 1014 PKMES 1018
>gi|194306623 immunoglobulin superfamily containing leucine-rich
repeat 2 [Homo sapiens]
Length = 745
Score = 37.7 bits (86), Expect = 0.008
Identities = 42/133 (31%), Positives = 53/133 (39%), Gaps = 16/133 (12%)
Query: 5 PEPPSGRVEGPPAWEAAPWPSLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRALRPD 64
PEP S PPA + P LP PC P + L+ L T + A F D
Sbjct: 204 PEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIAD 263
Query: 65 PSHRAPTLVWR---PGGELWIEPMGTARE----RSEDWYGSA-VPLLTDRAPEPPTQVGT 116
H P L W+ PGG + +EP + E +E+ G LLT + PT
Sbjct: 264 -GHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEGEGEGDGDLLTQTQAQTPTP--- 319
Query: 117 LEARATAPPAPSA 129
A A PAP A
Sbjct: 320 ----APAWPAPPA 328
>gi|194306621 immunoglobulin superfamily containing leucine-rich
repeat 2 [Homo sapiens]
Length = 745
Score = 37.7 bits (86), Expect = 0.008
Identities = 42/133 (31%), Positives = 53/133 (39%), Gaps = 16/133 (12%)
Query: 5 PEPPSGRVEGPPAWEAAPWPSLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRALRPD 64
PEP S PPA + P LP PC P + L+ L T + A F D
Sbjct: 204 PEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIAD 263
Query: 65 PSHRAPTLVWR---PGGELWIEPMGTARE----RSEDWYGSA-VPLLTDRAPEPPTQVGT 116
H P L W+ PGG + +EP + E +E+ G LLT + PT
Sbjct: 264 -GHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEGEGEGDGDLLTQTQAQTPTP--- 319
Query: 117 LEARATAPPAPSA 129
A A PAP A
Sbjct: 320 ----APAWPAPPA 328
>gi|39930401 immunoglobulin superfamily containing leucine-rich
repeat 2 [Homo sapiens]
Length = 745
Score = 37.7 bits (86), Expect = 0.008
Identities = 42/133 (31%), Positives = 53/133 (39%), Gaps = 16/133 (12%)
Query: 5 PEPPSGRVEGPPAWEAAPWPSLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRALRPD 64
PEP S PPA + P LP PC P + L+ L T + A F D
Sbjct: 204 PEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIAD 263
Query: 65 PSHRAPTLVWR---PGGELWIEPMGTARE----RSEDWYGSA-VPLLTDRAPEPPTQVGT 116
H P L W+ PGG + +EP + E +E+ G LLT + PT
Sbjct: 264 -GHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEGEGEGDGDLLTQTQAQTPTP--- 319
Query: 117 LEARATAPPAPSA 129
A A PAP A
Sbjct: 320 ----APAWPAPPA 328
>gi|194306618 immunoglobulin superfamily containing leucine-rich
repeat 2 [Homo sapiens]
Length = 745
Score = 37.7 bits (86), Expect = 0.008
Identities = 42/133 (31%), Positives = 53/133 (39%), Gaps = 16/133 (12%)
Query: 5 PEPPSGRVEGPPAWEAAPWPSLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRALRPD 64
PEP S PPA + P LP PC P + L+ L T + A F D
Sbjct: 204 PEPDSIACASPPALQGVPVYRLPALPCAPPSVHLSAEPPLEAPGTPLRAGLAFVLHCIAD 263
Query: 65 PSHRAPTLVWR---PGGELWIEPMGTARE----RSEDWYGSA-VPLLTDRAPEPPTQVGT 116
H P L W+ PGG + +EP + E +E+ G LLT + PT
Sbjct: 264 -GHPTPRLQWQLQIPGGTVVLEPPVLSGEDDGVGAEEGEGEGDGDLLTQTQAQTPTP--- 319
Query: 117 LEARATAPPAPSA 129
A A PAP A
Sbjct: 320 ----APAWPAPPA 328
>gi|11641239 hypothetical protein LOC53838 [Homo sapiens]
Length = 449
Score = 37.7 bits (86), Expect = 0.008
Identities = 53/189 (28%), Positives = 72/189 (38%), Gaps = 28/189 (14%)
Query: 5 PEPPSGRVEGPPAWEAAPWPSL-------PCGPCIPIMLVLATLAALFILTTAVLAERLF 57
P P S P+ A PSL P +P LATLA T A A
Sbjct: 167 PAPTSTSTGRTPSTTATGHPSLSTALAQVPKSSALPRTATLATLATR-AQTVATTANTSS 225
Query: 58 RRALRPDPSHRAPT-LVWRPGGELWIEPMGTARERSEDW-----YGSAVPLLTDRAPEP- 110
+ RP PS P+ P + + G + S D + P+ ++ PEP
Sbjct: 226 PMSTRPSPSKHMPSDTAASPVPPMRPQAQGPISQVSVDQPVVNTTNKSTPMPSNTTPEPA 285
Query: 111 --PTQVGTLEARA---TAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATG 165
PT V T +A+A TA P P P+++P + E+ A S P P A G
Sbjct: 286 PTPTVVTTTKAQAREPTASPVP-VPHTSP-------IPEMEAMSPTTQPSPMPYTQRAAG 337
Query: 166 LVSWAEPEQ 174
+ PEQ
Sbjct: 338 PGTSQAPEQ 346
>gi|144922631 tigger transposable element derived 5 [Homo sapiens]
Length = 593
Score = 37.7 bits (86), Expect = 0.008
Identities = 33/122 (27%), Positives = 46/122 (37%), Gaps = 22/122 (18%)
Query: 53 AERLFRRALRPDPSHRAPT-LVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPP 111
AE R+ P+ + +A WR W + G + +R +YG A P AP PP
Sbjct: 102 AEAFARQIYGPECTFKASHGWFWR-----WQKRHGISSQR---FYGEAGPPAPSPAPGPP 153
Query: 112 TQ--------VGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPA 163
+ G L RA APP P A G + + +W P + PP
Sbjct: 154 VKEEPALPSGAGPLPDRAPAPPPP-----AEGGYGDEQIYSASVTGLYWKLLPEQAAPPG 208
Query: 164 TG 165
G
Sbjct: 209 AG 210
>gi|239751471 PREDICTED: hypothetical protein XP_002347846 [Homo
sapiens]
Length = 870
Score = 37.4 bits (85), Expect = 0.010
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Query: 98 SAVPLLTDRAPEPPTQVGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPW 157
+A P RAPE T+ L RATA AP +AP G + PARS G
Sbjct: 760 AASPCQAPRAPEKETEAPRLRGRATA-VAPRPLPAAPGFSGLCVLQPFPARSRGLGVPSQ 818
Query: 158 EGRPPATGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDPEWGLQPRVTLEQIS 211
+G TG + P A + GS + + G P P V ++ +S
Sbjct: 819 QG---PTGSPGCRDRASAPRAGAEAGSMETFLRNGGLYPPPSPRAPAVCVQHLS 869
>gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo
sapiens]
Length = 538
Score = 37.4 bits (85), Expect = 0.010
Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Query: 98 SAVPLLTDRAPEPPTQVGTLEARATAPPAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPW 157
+A P RAPE T+ L RATA AP +AP G + PARS G
Sbjct: 428 AASPCQAPRAPEKETEAPRLRGRATA-VAPRPLPAAPGFSGLCVLQPFPARSRGLGVPSQ 486
Query: 158 EGRPPATGLVSWAEPEQRPEASVQFGSPQARRQRPGSPDPEWGLQPRVTLEQIS 211
+G TG + P A + GS + + G P P V ++ +S
Sbjct: 487 QG---PTGSPGCRDRASAPRAGAEAGSMETFLRNGGLYPPPSPRAPAVCVQHLS 537
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 37.0 bits (84), Expect = 0.014
Identities = 45/144 (31%), Positives = 55/144 (38%), Gaps = 30/144 (20%)
Query: 65 PSHRAPTLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPP-TQVGTLEARATA 123
PS A + + RP EL P TA E E SA+ L P PP T + L+
Sbjct: 347 PSEIADSSMTRPQ-ELPELPKTTALELQESSVASAMEL-----PGPPATSMPELQGPPVT 400
Query: 124 P----PAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATGLVSWAEPEQRPEAS 179
P P PSA P GP + P P PPAT + P P
Sbjct: 401 PVLELPGPSA-TPVPELPGPLST-----------PVPELPGPPATAVPELPGPSVTPV-- 446
Query: 180 VQFGSPQARRQRPGSPDPEWGLQP 203
PQ ++ PG P P GL+P
Sbjct: 447 -----PQLSQELPGLPAPSMGLEP 465
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 37.0 bits (84), Expect = 0.014
Identities = 45/144 (31%), Positives = 55/144 (38%), Gaps = 30/144 (20%)
Query: 65 PSHRAPTLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPP-TQVGTLEARATA 123
PS A + + RP EL P TA E E SA+ L P PP T + L+
Sbjct: 347 PSEIADSSMTRPQ-ELPELPKTTALELQESSVASAMEL-----PGPPATSMPELQGPPVT 400
Query: 124 P----PAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATGLVSWAEPEQRPEAS 179
P P PSA P GP + P P PPAT + P P
Sbjct: 401 PVLELPGPSA-TPVPELPGPLST-----------PVPELPGPPATAVPELPGPSVTPV-- 446
Query: 180 VQFGSPQARRQRPGSPDPEWGLQP 203
PQ ++ PG P P GL+P
Sbjct: 447 -----PQLSQELPGLPAPSMGLEP 465
>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 36.6 bits (83), Expect = 0.018
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 103 LTDRAPEPPTQVGTLEARATAPPA--PSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGR 160
L R +PP + +APPA P+AP P+ P+ ++ R PQ WE R
Sbjct: 101 LARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPA---PRPESQLSDR-----PQSWEQR 152
Query: 161 PPATGLVSWAEPEQRPEASVQFGSPQARRQRP 192
P G + + P A + QARR+RP
Sbjct: 153 PRGPGRSARSAGAAAPPAGGLAQARQARRRRP 184
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 36.2 bits (82), Expect = 0.023
Identities = 49/190 (25%), Positives = 64/190 (33%), Gaps = 34/190 (17%)
Query: 7 PPSGRVEGPPAWEAAPWP--SLPCGPCIPIMLVLATLAALFILTTAVLAERLFRRALRPD 64
PP R+ W +APW +LP P P + A R +A++P
Sbjct: 80 PPCRRLASYSFWSSAPWRELTLPVSPADPAAPPSSPHA----------PTRPPPQAVQPR 129
Query: 65 PSHRAPTLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEARATAP 124
PS P P G L P G R A+P AP P P
Sbjct: 130 PSEPTPGSEALPPGSL---PEGEPRP-------YALPPRESPAPRPFRWGDPFSPAPPRP 179
Query: 125 PAPSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEG-RPPATGLVSWAEPEQRPEASVQFG 183
PS P + P P+R F P+P G P +V+ Q P V G
Sbjct: 180 QPPSRPAAQP-----------PSRPAFRSPRPVRGPHPRRAVVVAVLFGVQAPRRDVAEG 228
Query: 184 SPQARRQRPG 193
+ +RPG
Sbjct: 229 GLRRDGRRPG 238
>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 35.8 bits (81), Expect = 0.030
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 17/139 (12%)
Query: 70 PTLVWRPG------GELWIEPMGTARERSEDWYGSAVPLL------TDRAPEPPTQVGTL 117
P WR G G+L +AR R+ +P+ T+ P PP T
Sbjct: 131 PLSRWRTGSLTYVAGDLGASGAVSARVRARASLALGLPIQCHRHISTEPPPPPPAAPATG 190
Query: 118 EARATAPPAPS-APNSAPSNLGPQTVLEVPARSTFWGPQPWEGRP--PATGLVSWAEPEQ 174
A++ PAP+ AP AP Q+ +P P P + R +TGL + +
Sbjct: 191 SAQSRPRPAPARAPLIAPG--AHQSAPPLPVLGRLPAPLPLQLRAGGASTGLAAPSPGRG 248
Query: 175 RPEASVQFGSPQARRQRPG 193
++ + F P R Q PG
Sbjct: 249 GKQSEISFRGPGPRAQHPG 267
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 35.8 bits (81), Expect = 0.030
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 10/114 (8%)
Query: 84 PMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEARAT-------APPAPSAPNSAPSN 136
P G ++ ED + P T++ P Q G L A P AP
Sbjct: 1959 PRGIQPQQFEDQRVHSPPRFTNQRAPAPLQFGGLRGSAPFSEKNEQTPSRFHFQGQAPQV 2018
Query: 137 L--GPQTVLEVPARSTFWGPQPWEGRPPATGLVSWAEPEQRPEASVQFGSPQAR 188
+ GP+ +LE+P+ WE P + L S A P Q PEA Q+ S R
Sbjct: 2019 MKPGPRPLLELPSHPPQHRKDRWEEAGPPSALSSSA-PGQGPEADGQWASADFR 2071
Score = 28.9 bits (63), Expect = 3.7
Identities = 38/123 (30%), Positives = 48/123 (39%), Gaps = 18/123 (14%)
Query: 83 EPMGTARERSEDWYGSAVPL--LTDRA-----PEPPTQVGTLEARATAP-PAPSAPNSAP 134
+P R +E G PL L+ R PE G L +A P P P S+P
Sbjct: 1559 DPRQARRLAAETGEGEGEPLSRLSARGAQGALPERDASRGGLVGQAPMPVPEEKEPASSP 1618
Query: 135 SNLGPQTVLEVPARSTF--WGPQPWEGRPPATGLVSWAEPEQRPEASVQFGSPQARRQRP 192
G + PA S W +P EG PAT S A P +R V +P +P
Sbjct: 1619 WASGEKP----PAGSEQDGWKAEPGEGTRPATVGDSSARPARR----VLLPTPPCGALQP 1670
Query: 193 GSP 195
G P
Sbjct: 1671 GFP 1673
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 35.8 bits (81), Expect = 0.030
Identities = 57/232 (24%), Positives = 76/232 (32%), Gaps = 46/232 (19%)
Query: 6 EPPSGRVEGPPAWEA-----------------APWPSLPC---GPCIPIMLVLATLAALF 45
EPPSG + P+W + P P P +P + A +
Sbjct: 534 EPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEAPAESRDPEVPTVPAEAPAPSPV 593
Query: 46 ILTTAVLAERLFRRALRPDPSHRAPTLVWRPGGELWIE----PMGTARERSEDWYGSAVP 101
LTT AE D S R+ + V PGG L+ AR R E S P
Sbjct: 594 PLTTPASAEEAIPLPASSD-SERSASSVEGPGGALYARVARREARPARARGEIGGLSLSP 652
Query: 102 LLTDRAPEPPTQV-------------GTLEARATAPP--------APSAPNSAPSNLGPQ 140
R P PP RA +PP +PS PS+
Sbjct: 653 SPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAH 712
Query: 141 TVLEVPARSTFWGPQPWEGRPPATGLVSWAEPEQRPEASVQFGSPQARRQRP 192
TV R+ P+P AT L + + P R A+ + RR+ P
Sbjct: 713 TVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSP 764
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,606,291
Number of Sequences: 37866
Number of extensions: 785134
Number of successful extensions: 6083
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 424
Number of HSP's that attempted gapping in prelim test: 5063
Number of HSP's gapped (non-prelim): 1416
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.