Guide to the Human Genome
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Name: MAP2K6 Sequence: fasta or formatted (334aa) NCBI GI: 14589900
Description:

mitogen-activated protein kinase kinase 6

Referenced in:

MAP Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         17           1
 C cysteine            1.8          6           1
 D aspartate           6.6         22           2
 E glutamate           6.0         20           2
 F phenylalanine       4.5         15           2
 G glycine             6.0         20           1
 H histidine           1.8          6           1
 I isoleucine          6.9         23           1
 K lysine              8.7         29           2
 L leucine             8.4         28           2
 M methionine          3.6         12           1
 N asparagine          2.7          9           1
 P proline             6.3         21           2
 Q glutamine           5.1         17           2
 R arginine            3.9         13           1
 S serine              7.8         26           2
 T threonine           4.5         15           1
 V valine              7.2         24           2
 W tryptophan          0.9          3           1
 Y tyrosine            2.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase kinase 6 
MAP2K3                0.790   mitogen-activated protein kinase kinase 3 isoform B ...
MAP2K3                0.779   mitogen-activated protein kinase kinase 3 isoform A ...
LOC100133591          0.539   PREDICTED: similar to MAP kinase 3c 
MAP2K4                0.509   mitogen-activated protein kinase kinase 4 
LOC100133591          0.394   PREDICTED: similar to mitogen-activated protein kin...
MAP2K7                0.372   mitogen-activated protein kinase kinase 7 
MAP2K5                0.301   mitogen-activated protein kinase kinase 5 isoform A ...
MAP2K1                0.298   mitogen-activated protein kinase kinase 1 
MAP2K2                0.281   mitogen-activated protein kinase kinase 2 
MAP2K5                0.281   mitogen-activated protein kinase kinase 5 isoform B [...
STK3                  0.202   serine/threonine kinase 3 
STK4                  0.201   serine/threonine kinase 4 
STK10                 0.179   serine/threonine kinase 10 
TNIK                  0.177   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.177   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.177   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.177   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.177   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.177   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.177   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.177   TRAF2 and NCK interacting kinase isoform 1 
MAP4K4                0.176   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.176   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.176   mitogen-activated protein kinase kinase kinase kinas...
MYO3A                 0.168   myosin IIIA 
MINK1                 0.165   misshapen/NIK-related kinase isoform 4 
MINK1                 0.165   misshapen/NIK-related kinase isoform 2 
MINK1                 0.165   misshapen/NIK-related kinase isoform 3 
MINK1                 0.165   misshapen/NIK-related kinase isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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