Guide to the Human Genome
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Name: MAP2K5 Sequence: fasta or formatted (438aa) NCBI GI: 4506101
Description:

mitogen-activated protein kinase kinase 5 isoform B

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [448aa] mitogen-activated protein kinase kinase 5 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         23           2
 C cysteine            1.6          7           1
 D aspartate           4.6         20           1
 E glutamate           6.6         29           2
 F phenylalanine       3.4         15           2
 G glycine             7.3         32           2
 H histidine           2.3         10           1
 I isoleucine          6.6         29           2
 K lysine              5.0         22           2
 L leucine             9.4         41           2
 M methionine          3.7         16           1
 N asparagine          3.9         17           1
 P proline             5.9         26           2
 Q glutamine           5.5         24           2
 R arginine            4.6         20           2
 S serine              7.5         33           2
 T threonine           3.9         17           3
 V valine              8.4         37           2
 W tryptophan          1.1          5           1
 Y tyrosine            3.4         15           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase kinase 5 isoform B [... 
MAP2K5                0.991   mitogen-activated protein kinase kinase 5 isoform A ...
MAP2K1                0.258   mitogen-activated protein kinase kinase 1 
MAP2K2                0.248   mitogen-activated protein kinase kinase 2 
MAP2K6                0.212   mitogen-activated protein kinase kinase 6 
MAP2K3                0.200   mitogen-activated protein kinase kinase 3 isoform A ...
MAP2K3                0.200   mitogen-activated protein kinase kinase 3 isoform B ...
MAP2K4                0.190   mitogen-activated protein kinase kinase 4 
MST4                  0.164   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK25                 0.164   serine/threonine kinase 25 
STK24                 0.160   serine/threonine kinase 24 isoform b 
STK24                 0.160   serine/threonine kinase 24 isoform a 
STK3                  0.155   serine/threonine kinase 3 
STK4                  0.154   serine/threonine kinase 4 
MAP2K7                0.154   mitogen-activated protein kinase kinase 7 
LOC100133591          0.146   PREDICTED: similar to MAP kinase 3c 
MAP4K3                0.135   mitogen-activated protein kinase kinase kinase kinas...
TNIK                  0.134   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.134   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.134   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.134   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.134   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.134   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.134   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.134   TRAF2 and NCK interacting kinase isoform 1 
STK10                 0.132   serine/threonine kinase 10 
MAP4K2                0.131   mitogen-activated protein kinase kinase kinase kinas...
MINK1                 0.125   misshapen/NIK-related kinase isoform 4 
MINK1                 0.125   misshapen/NIK-related kinase isoform 2 
MINK1                 0.125   misshapen/NIK-related kinase isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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