Guide to the Human Genome
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Name: GNGT2 Sequence: fasta or formatted (69aa) NCBI GI: 14589849
Description:

guanine nucleotide binding protein-gamma transducing activity polypeptide 2

Referenced in:

G Proteins
Photoreceptors and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8          4           1
 C cysteine            1.4          1           1
 D aspartate           5.8          4           1
 E glutamate          13.0          9           1
 F phenylalanine       2.9          2           1
 G glycine             7.2          5           2
 H histidine           0.0          0           0
 I isoleucine          7.2          5           1
 K lysine             17.4         12           2
 L leucine             8.7          6           2
 M methionine          2.9          2           1
 N asparagine          4.3          3           1
 P proline             5.8          4           1
 Q glutamine           4.3          3           1
 R arginine            1.4          1           1
 S serine              4.3          3           1
 T threonine           1.4          1           1
 V valine              4.3          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein-gamma transducing... 
GNG11                 0.609   guanine nucleotide binding protein gamma 11 precursor...
GNGT1                 0.583   guanine nucleotide binding protein (G protein), gamm...
GNG7                  0.270   guanine nucleotide binding protein (G protein), gamm...
GNG12                 0.252   G-protein gamma-12 subunit 
GNG2                  0.226   guanine nucleotide binding protein (G protein), gamm...
GNG3                  0.200   guanine nucleotide binding protein (G protein), gamma...
GNG10                 0.183   guanine nucleotide binding protein (G protein), gamm...
GNG8                  0.174   guanine nucleotide binding protein (G protein), gamm...
GNG4                  0.174   guanine nucleotide binding protein (G protein), gam...
GNG4                  0.174   guanine nucleotide binding protein (G protein), gam...
GNG4                  0.174   guanine nucleotide binding protein (G protein), gamma...
GNG5                  0.148   guanine nucleotide binding protein (G protein), gamma...
GNG13                 0.113   guanine nucleotide binding protein (G protein), gamma...
LOC648044             0.113   PREDICTED: similar to hCG1650801 
LOC648044             0.113   PREDICTED: similar to hCG1650801 
LOC648044             0.113   PREDICTED: similar to hCG1650801 
DNAJC25-GNG10         0.087   DNAJC25-GNG10 protein 
PNMAL2                0.061   PNMA-like 2 
ITPR3                 0.061   inositol 1,4,5-triphosphate receptor, type 3 
HIP1R                 0.035   huntingtin interacting protein-1-related 
LOC100294412          0.035   PREDICTED: similar to KIAA0655 protein 
HAND2                 0.035   basic helix-loop-helix transcription factor HAND2 [H...
CENPE                 0.026   centromere protein E 
CDK5RAP2              0.026   CDK5 regulatory subunit associated protein 2 isoform...
CDK5RAP2              0.026   CDK5 regulatory subunit associated protein 2 isoform...
RGS7                  0.017   regulator of G-protein signaling 7 
TRIM7                 0.017   tripartite motif-containing 7 isoform 4 
CCDC41                0.017   NY-REN-58 antigen 
CCDC41                0.017   NY-REN-58 antigen 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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