Guide to the Human Genome
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Name: GNG8 Sequence: fasta or formatted (70aa) NCBI GI: 15147246
Description:

guanine nucleotide binding protein (G protein), gamma 8

Referenced in:

G Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.3         10           3
 C cysteine            2.9          2           1
 D aspartate           5.7          4           2
 E glutamate           8.6          6           1
 F phenylalanine       4.3          3           1
 G glycine             0.0          0           0
 H histidine           1.4          1           1
 I isoleucine          2.9          2           1
 K lysine              8.6          6           1
 L leucine            11.4          8           2
 M methionine          4.3          3           1
 N asparagine          5.7          4           2
 P proline             5.7          4           1
 Q glutamine           2.9          2           1
 R arginine            5.7          4           1
 S serine              2.9          2           1
 T threonine           4.3          3           1
 V valine              8.6          6           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein (G protein), gamm... 
GNG2                  0.730   guanine nucleotide binding protein (G protein), gamm...
GNG4                  0.635   guanine nucleotide binding protein (G protein), gam...
GNG4                  0.635   guanine nucleotide binding protein (G protein), gam...
GNG4                  0.635   guanine nucleotide binding protein (G protein), gamma...
GNG3                  0.574   guanine nucleotide binding protein (G protein), gamma...
GNG7                  0.487   guanine nucleotide binding protein (G protein), gamm...
GNG12                 0.478   G-protein gamma-12 subunit 
GNG5                  0.322   guanine nucleotide binding protein (G protein), gamma...
GNG10                 0.322   guanine nucleotide binding protein (G protein), gamm...
LOC648044             0.270   PREDICTED: similar to hCG1650801 
LOC648044             0.270   PREDICTED: similar to hCG1650801 
LOC648044             0.270   PREDICTED: similar to hCG1650801 
LOC100291110          0.235   PREDICTED: hypothetical protein XP_002347578 
LOC100289060          0.235   PREDICTED: hypothetical protein XP_002343408 
GNGT1                 0.200   guanine nucleotide binding protein (G protein), gamm...
GNG11                 0.183   guanine nucleotide binding protein gamma 11 precursor...
GNGT2                 0.174   guanine nucleotide binding protein-gamma transducing...
DNAJC25-GNG10         0.174   DNAJC25-GNG10 protein 
RGS6                  0.078   regulator of G-protein signalling 6 
GNG13                 0.070   guanine nucleotide binding protein (G protein), gamma...
RGS7                  0.052   regulator of G-protein signaling 7 
SYNE2                 0.035   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.035   spectrin repeat containing, nuclear envelope 2 isofo...
WEE1                  0.017   WEE1 tyrosine kinase isoform 2 
WEE1                  0.017   WEE1 tyrosine kinase isoform 1 
SYNE2                 0.009   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.009   spectrin repeat containing, nuclear envelope 2 isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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