Guide to the Human Genome
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Name: GNG11 Sequence: fasta or formatted (73aa) NCBI GI: 4758448
Description:

guanine nucleotide binding protein gamma 11 precursor

Referenced in:

G Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.4          1           1
 C cysteine            2.7          2           1
 D aspartate           4.1          3           1
 E glutamate          17.8         13           2
 F phenylalanine       1.4          1           1
 G glycine             4.1          3           1
 H histidine           1.4          1           1
 I isoleucine          6.8          5           1
 K lysine             15.1         11           1
 L leucine             8.2          6           1
 M methionine          2.7          2           1
 N asparagine          2.7          2           1
 P proline             6.8          5           1
 Q glutamine           5.5          4           2
 R arginine            4.1          3           1
 S serine              6.8          5           1
 T threonine           0.0          0           0
 V valine              6.8          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein gamma 11 precursor... 
GNGT1                 0.742   guanine nucleotide binding protein (G protein), gamm...
GNGT2                 0.565   guanine nucleotide binding protein-gamma transducing...
GNG12                 0.282   G-protein gamma-12 subunit 
GNG7                  0.258   guanine nucleotide binding protein (G protein), gamm...
GNG2                  0.185   guanine nucleotide binding protein (G protein), gamm...
GNG3                  0.177   guanine nucleotide binding protein (G protein), gamma...
GNG10                 0.177   guanine nucleotide binding protein (G protein), gamm...
GNG8                  0.169   guanine nucleotide binding protein (G protein), gamm...
GNG4                  0.153   guanine nucleotide binding protein (G protein), gam...
GNG4                  0.153   guanine nucleotide binding protein (G protein), gam...
GNG4                  0.153   guanine nucleotide binding protein (G protein), gamma...
GNG13                 0.153   guanine nucleotide binding protein (G protein), gamma...
GNG5                  0.153   guanine nucleotide binding protein (G protein), gamma...
LOC100291110          0.129   PREDICTED: hypothetical protein XP_002347578 
LOC100289060          0.129   PREDICTED: hypothetical protein XP_002343408 
DNAJC25-GNG10         0.097   DNAJC25-GNG10 protein 
PBXIP1                0.081   pre-B-cell leukemia homeobox interacting protein 1 [...
HIP1R                 0.065   huntingtin interacting protein-1-related 
LOC100294412          0.065   PREDICTED: similar to KIAA0655 protein 
LOC283685             0.056   PREDICTED: golgi autoantigen, golgin subfamily a-li...
SYCP1                 0.056   synaptonemal complex protein 1 
KTN1                  0.056   kinectin 1 isoform b 
KTN1                  0.056   kinectin 1 isoform a 
KTN1                  0.056   kinectin 1 isoform c 
KTN1                  0.056   kinectin 1 isoform a 
LOC648044             0.056   PREDICTED: similar to hCG1650801 
LOC648044             0.056   PREDICTED: similar to hCG1650801 
LOC648044             0.056   PREDICTED: similar to hCG1650801 
CCDC64B               0.056   coiled-coil domain containing 64B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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