Guide to the Human Genome
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Name: GNG5 Sequence: fasta or formatted (68aa) NCBI GI: 4885287
Description:

guanine nucleotide binding protein (G protein), gamma 5

Referenced in:

G Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3          7           3
 C cysteine            2.9          2           1
 D aspartate           2.9          2           1
 E glutamate           1.5          1           1
 F phenylalanine       4.4          3           1
 G glycine             4.4          3           1
 H histidine           1.5          1           1
 I isoleucine          0.0          0           0
 K lysine              7.4          5           2
 L leucine            11.8          8           2
 M methionine          2.9          2           1
 N asparagine          4.4          3           1
 P proline             4.4          3           1
 Q glutamine          10.3          7           2
 R arginine            4.4          3           1
 S serine             13.2          9           3
 T threonine           2.9          2           1
 V valine             10.3          7           2
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein (G protein), gamma... 
GNG10                 0.505   guanine nucleotide binding protein (G protein), gamm...
GNG7                  0.495   guanine nucleotide binding protein (G protein), gamm...
LOC100291110          0.440   PREDICTED: hypothetical protein XP_002347578 
LOC100289060          0.440   PREDICTED: hypothetical protein XP_002343408 
GNG12                 0.431   G-protein gamma-12 subunit 
GNG2                  0.404   guanine nucleotide binding protein (G protein), gamm...
GNG3                  0.358   guanine nucleotide binding protein (G protein), gamma...
GNG4                  0.358   guanine nucleotide binding protein (G protein), gam...
GNG4                  0.358   guanine nucleotide binding protein (G protein), gam...
GNG4                  0.358   guanine nucleotide binding protein (G protein), gamma...
GNG8                  0.339   guanine nucleotide binding protein (G protein), gamm...
DNAJC25-GNG10         0.266   DNAJC25-GNG10 protein 
LOC648044             0.248   PREDICTED: similar to hCG1650801 
LOC648044             0.248   PREDICTED: similar to hCG1650801 
LOC648044             0.248   PREDICTED: similar to hCG1650801 
GNG11                 0.174   guanine nucleotide binding protein gamma 11 precursor...
GNGT2                 0.156   guanine nucleotide binding protein-gamma transducing...
GNGT1                 0.128   guanine nucleotide binding protein (G protein), gamm...
RGS11                 0.064   regulator of G-protein signalling 11 isoform 1 [Homo...
RGS11                 0.064   regulator of G-protein signalling 11 isoform 2 
GNG13                 0.028   guanine nucleotide binding protein (G protein), gamma...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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