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Search of human proteins with 145580619
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145580619 B and T lymphocyte associated isoform 2 [Homo
sapiens]
(241 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145580619 B and T lymphocyte associated isoform 2 [Homo sapiens] 502 e-142
gi|145580621 B and T lymphocyte associated isoform 1 [Homo sapiens] 479 e-136
gi|110349719 titin isoform N2-A [Homo sapiens] 39 0.005
gi|110349721 titin isoform novex-3 [Homo sapiens] 35 0.045
gi|88979855 PREDICTED: similar to v-kit Hardy-Zuckerman 4 feline... 35 0.076
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens] 33 0.17
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens] 33 0.17
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 33 0.29
gi|148005039 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncoge... 32 0.49
gi|4557695 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene... 32 0.49
gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens] 32 0.49
gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens] 32 0.49
gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo ... 32 0.49
gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo ... 32 0.49
gi|139948432 adlican [Homo sapiens] 32 0.49
gi|4826754 fibroblast growth factor binding protein 1 [Homo sapi... 32 0.49
gi|118572606 hemicentin 1 [Homo sapiens] 31 0.84
gi|19923632 Kazal-type serine peptidase inhibitor domain 1 precu... 30 1.4
gi|41352061 metalloprotease 1 [Homo sapiens] 30 1.9
gi|59806363 hypothetical protein LOC9729 [Homo sapiens] 30 2.5
gi|239754269 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|169168665 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|113417486 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|239740898 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo ... 30 2.5
gi|239740777 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|239740724 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|239740674 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|239740645 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
gi|239513940 PREDICTED: hypothetical protein [Homo sapiens] 30 2.5
>gi|145580619 B and T lymphocyte associated isoform 2 [Homo sapiens]
Length = 241
Score = 502 bits (1293), Expect = e-142
Identities = 241/241 (100%), Positives = 241/241 (100%)
Query: 1 MKTLPAMLGTGKLFWVFFLIPYLDIWNIHGKESCDVQLYIKRQSEHSILAGDPFELECPV 60
MKTLPAMLGTGKLFWVFFLIPYLDIWNIHGKESCDVQLYIKRQSEHSILAGDPFELECPV
Sbjct: 1 MKTLPAMLGTGKLFWVFFLIPYLDIWNIHGKESCDVQLYIKRQSEHSILAGDPFELECPV 60
Query: 61 KYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQ 120
KYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQ
Sbjct: 61 KYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQ 120
Query: 121 SNLIESHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEASTRQNSQVLLSETGIYDN 180
SNLIESHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEASTRQNSQVLLSETGIYDN
Sbjct: 121 SNLIESHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEASTRQNSQVLLSETGIYDN 180
Query: 181 DPDLCFRMQEGSEVYSNPCLEENKPGIVYASLNHSVIGPNSRLARNVKEAPTEYASICVR 240
DPDLCFRMQEGSEVYSNPCLEENKPGIVYASLNHSVIGPNSRLARNVKEAPTEYASICVR
Sbjct: 181 DPDLCFRMQEGSEVYSNPCLEENKPGIVYASLNHSVIGPNSRLARNVKEAPTEYASICVR 240
Query: 241 S 241
S
Sbjct: 241 S 241
>gi|145580621 B and T lymphocyte associated isoform 1 [Homo sapiens]
Length = 289
Score = 479 bits (1234), Expect = e-136
Identities = 241/289 (83%), Positives = 241/289 (83%), Gaps = 48/289 (16%)
Query: 1 MKTLPAMLGTGKLFWVFFLIPYLDIWNIHGKESCDVQLYIKRQSEHSILAGDPFELECPV 60
MKTLPAMLGTGKLFWVFFLIPYLDIWNIHGKESCDVQLYIKRQSEHSILAGDPFELECPV
Sbjct: 1 MKTLPAMLGTGKLFWVFFLIPYLDIWNIHGKESCDVQLYIKRQSEHSILAGDPFELECPV 60
Query: 61 KYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQ 120
KYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQ
Sbjct: 61 KYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQ 120
Query: 121 SNLIESHSTTLYVT---------------------------------------------- 134
SNLIESHSTTLYVT
Sbjct: 121 SNLIESHSTTLYVTDVKSASERPSKDEMASRPWLLYSLLPLGGLPLLITTCFCLFCCLRR 180
Query: 135 --GKQNELSDTAGREINLVDAHLKSEQTEASTRQNSQVLLSETGIYDNDPDLCFRMQEGS 192
GKQNELSDTAGREINLVDAHLKSEQTEASTRQNSQVLLSETGIYDNDPDLCFRMQEGS
Sbjct: 181 HQGKQNELSDTAGREINLVDAHLKSEQTEASTRQNSQVLLSETGIYDNDPDLCFRMQEGS 240
Query: 193 EVYSNPCLEENKPGIVYASLNHSVIGPNSRLARNVKEAPTEYASICVRS 241
EVYSNPCLEENKPGIVYASLNHSVIGPNSRLARNVKEAPTEYASICVRS
Sbjct: 241 EVYSNPCLEENKPGIVYASLNHSVIGPNSRLARNVKEAPTEYASICVRS 289
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 38.5 bits (88), Expect = 0.005
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 28/137 (20%)
Query: 25 IWNIHGKESCDVQL-------YIKRQSEHSILAGDPFELECPVKYCANRPH--VTW---- 71
I N GK+SC Q+ ++K+ + GD L+C + A P V+W
Sbjct: 7942 IENASGKDSCSAQILILEPPYFVKQLEPVKVSVGDSASLQCQL---AGTPEIGVSWYKGD 7998
Query: 72 CKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTL 131
KL TT K+ R N++ + F V ND+G Y C A N + S +
Sbjct: 7999 TKLRPTTTYKMHFR-------NNVATLV--FNQVDINDSGEYICKA---ENSVGEVSAST 8046
Query: 132 YVTGKQNELSDTAGREI 148
++T ++ +L + R++
Sbjct: 8047 FLTVQEQKLPPSFSRQL 8063
Score = 30.4 bits (67), Expect = 1.4
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 27 NIHGKESCDVQL-------YIKRQSEHSILAGDPFELECPVKYCANRP-HVTWCKLNGTT 78
N G SC ++L +I+ ++ ELEC V P VTW K N
Sbjct: 4938 NDAGTASCSIELKVKEPPTFIRELKPVEVVKYSDVELECEVT--GTPPFEVTWLKNNRE- 4994
Query: 79 CVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRC 115
++ + T +S F LH P+D G Y+C
Sbjct: 4995 -IRSSKKYTL---TDRVSVFNLHITKCDPSDTGEYQC 5027
Score = 28.1 bits (61), Expect = 7.1
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 29/122 (23%)
Query: 27 NIHGKESCDVQL-------YIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTC 79
NI GK+SC QL +IK+ I+ D F +Y CK+ G+
Sbjct: 7288 NIAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEF-----TRY--------ECKIGGSPE 7334
Query: 80 VKL----EDRQTSWKEEKNISFF----ILHFEPVLPNDNGSYRCSANFQSNLIESHSTTL 131
+K+ ++ + + +SF +L + D+G Y C A+ + S ST+L
Sbjct: 7335 IKVLWYKDETEIQESSKFRMSFVDSVAVLEMHNLSVEDSGDYTCEAHNAAGSASS-STSL 7393
Query: 132 YV 133
V
Sbjct: 7394 KV 7395
Score = 28.1 bits (61), Expect = 7.1
Identities = 33/97 (34%), Positives = 38/97 (39%), Gaps = 15/97 (15%)
Query: 27 NIHGKESCDVQLYI-------KRQSEHSILAGDPFELECPVKYCANRP-HVTWCKLNGTT 78
N GK SC LYI KR +++SI G P LE + P VTW K NG
Sbjct: 7851 NEAGKASCTTHLYIKAPAKFVKRLNDYSIEKGKPLILE--GTFTGTPPISVTW-KKNGIN 7907
Query: 79 CVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRC 115
V R EK+ IL D G Y C
Sbjct: 7908 -VTPSQRCNITTTEKSA---ILEIPSSTVEDAGQYNC 7940
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 35.4 bits (80), Expect = 0.045
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 51 GDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDN 110
GD LEC + +P VTW + NG V L+ Q EE N S L+ + V D+
Sbjct: 4173 GDSIILECLISG-EPQPVVTWFQ-NG---VLLKQNQKFQFEEVNCSHQ-LYIKDVNSQDS 4226
Query: 111 GSYRCSANFQSNLIESHS--TTLYVTGKQNELSDTAG 145
G Y+C A S +ES S T VT ++N + G
Sbjct: 4227 GKYKCVAENNSGAVESVSDLTVEPVTYRENSQFENIG 4263
Score = 30.4 bits (67), Expect = 1.4
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 39 YIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFF 98
+IK S+ G +C V+ + RP V W K KL + EE F
Sbjct: 5516 FIKGISDCYAPIGTAAYFQCLVRG-SPRPTVYWYKDG-----KLVQGRRFTVEESGTGFH 5569
Query: 99 ILHFEPVLPNDNGSYRCSANFQSNLIES 126
L ++ +D G YRC A +S + ES
Sbjct: 5570 NLFITSLVKSDEGEYRCVATNKSGMAES 5597
>gi|88979855 PREDICTED: similar to v-kit Hardy-Zuckerman 4 feline
sarcoma viral oncogene homolog [Homo sapiens]
Length = 208
Score = 34.7 bits (78), Expect = 0.076
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 43 QSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKE-----EKNISF 97
++ + + G+ F + C +K ++ + TW + N T KL+++ SW E+ +
Sbjct: 110 KASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQT--KLQEKYNSWHHGDFNYERQAT- 166
Query: 98 FILHFEPVLPNDNGSYRCSAN--FQSNLIESHSTTLYVTGK 136
L ND+G + C AN F S + +TTL V GK
Sbjct: 167 --LTISSARVNDSGVFMCYANNTFGSANV---TTTLEVVGK 202
>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
Length = 1863
Score = 33.5 bits (75), Expect = 0.17
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 25/128 (19%)
Query: 27 NIHGKESCDVQLYIKRQS-------------EHSILAGDPFELECPVKYCANRPHVTWCK 73
N G+ SC L ++R + + +++ G F L+C V+ P +TW
Sbjct: 491 NAQGQLSCSWTLQVERLAVMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPV-PRITWL- 548
Query: 74 LNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYV 133
LNG + E LH + LP D+G+Y C A N + S + +V
Sbjct: 549 LNGQPIQYARSTCEAGVAE-------LHIQDALPEDHGTYTCLA---ENALGQVSCSAWV 598
Query: 134 TGKQNELS 141
T + + S
Sbjct: 599 TVHEKKSS 606
>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
Length = 1914
Score = 33.5 bits (75), Expect = 0.17
Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 25/128 (19%)
Query: 27 NIHGKESCDVQLYIKRQS-------------EHSILAGDPFELECPVKYCANRPHVTWCK 73
N G+ SC L ++R + + +++ G F L+C V+ P +TW
Sbjct: 491 NAQGQLSCSWTLQVERLAVMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPV-PRITWL- 548
Query: 74 LNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYV 133
LNG + E LH + LP D+G+Y C A N + S + +V
Sbjct: 549 LNGQPIQYARSTCEAGVAE-------LHIQDALPEDHGTYTCLA---ENALGQVSCSAWV 598
Query: 134 TGKQNELS 141
T + + S
Sbjct: 599 TVHEKKSS 606
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 32.7 bits (73), Expect = 0.29
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 39 YIKRQSEH-SILAGDPFELECPVKYCANRPHVT--WCKLNGTTCVKLEDRQTSWKEEKNI 95
Y EH S+ AG+ +L+C P +T W ++ + L R T+ E
Sbjct: 3300 YATTVPEHASVQAGETVQLQC---LAHGTPPLTFQWSRVGSS----LPGRATARNE---- 3348
Query: 96 SFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYVTGKQNELSDTA 144
+LHFE P D+G YRC + E+ + L V G L T+
Sbjct: 3349 ---LLHFERAAPEDSGRYRCRVTNKVGSAEAFA-QLLVQGPPGSLPATS 3393
Score = 29.3 bits (64), Expect = 3.2
Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 21/107 (19%)
Query: 30 GKESCDVQLYIK---------RQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCV 80
GK QL I+ R S +++ G E EC + +P VTW K+ G
Sbjct: 3473 GKAQASAQLVIQALPSVLINIRTSVQTVVVGHAVEFEC-LALGDPKPQVTWSKVGGHLRP 3531
Query: 81 KLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIESH 127
+ S ++ V D G YRC+A + +SH
Sbjct: 3532 GIVQ-----------SGGVVRIAHVELADAGQYRCTATNAAGTTQSH 3567
>gi|148005039 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene
homolog isoform 2 precursor [Homo sapiens]
Length = 972
Score = 32.0 bits (71), Expect = 0.49
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 43 QSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKE-----EKNISF 97
++ + + G+ F + C +K ++ + TW + N T KL+++ SW E+ +
Sbjct: 218 KASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQT--KLQEKYNSWHHGDFNYERQAT- 274
Query: 98 FILHFEPVLPNDNGSYRCSAN 118
L ND+G + C AN
Sbjct: 275 --LTISSARVNDSGVFMCYAN 293
>gi|4557695 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene
homolog isoform 1 precursor [Homo sapiens]
Length = 976
Score = 32.0 bits (71), Expect = 0.49
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 43 QSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKE-----EKNISF 97
++ + + G+ F + C +K ++ + TW + N T KL+++ SW E+ +
Sbjct: 218 KASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQT--KLQEKYNSWHHGDFNYERQAT- 274
Query: 98 FILHFEPVLPNDNGSYRCSAN 118
L ND+G + C AN
Sbjct: 275 --LTISSARVNDSGVFMCYAN 293
>gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]
Length = 1794
Score = 32.0 bits (71), Expect = 0.49
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 47 SILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVL 106
+++ G F L+C V+ P +TW LNG + E LH + L
Sbjct: 455 AVIEGQDFVLQCSVRGTPV-PRITWL-LNGQPIQYARSTCEAGVAE-------LHIQDAL 505
Query: 107 PNDNGSYRCSANFQSNLIESHSTTLYVTGKQNELS 141
P D+G+Y C A N + S + +VT + + S
Sbjct: 506 PEDHGTYTCLA---ENALGQVSCSAWVTVHEKKSS 537
>gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]
Length = 1845
Score = 32.0 bits (71), Expect = 0.49
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 47 SILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVL 106
+++ G F L+C V+ P +TW LNG + E LH + L
Sbjct: 455 AVIEGQDFVLQCSVRGTPV-PRITWL-LNGQPIQYARSTCEAGVAE-------LHIQDAL 505
Query: 107 PNDNGSYRCSANFQSNLIESHSTTLYVTGKQNELS 141
P D+G+Y C A N + S + +VT + + S
Sbjct: 506 PEDHGTYTCLA---ENALGQVSCSAWVTVHEKKSS 537
>gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo
sapiens]
Length = 1642
Score = 32.0 bits (71), Expect = 0.49
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 163 STRQNSQVLLSETGIYDNDPDLCFRMQEGSEVYSNPCLEENKPGIVYASLNHSVIGPNS- 221
ST+ ++ L D D D+ + E+ C EE KP I+ ++L+
Sbjct: 1247 STKSKNRKLPEPPDNEDEDEDVKAERLKVKELMGCQCCEE-KPSIMVSNLHKEYDDKKDF 1305
Query: 222 RLARNVKEAPTEYASICVR 240
L+R VK+ T+Y S CV+
Sbjct: 1306 LLSRKVKKVATKYISFCVK 1324
>gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo
sapiens]
Length = 1642
Score = 32.0 bits (71), Expect = 0.49
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 163 STRQNSQVLLSETGIYDNDPDLCFRMQEGSEVYSNPCLEENKPGIVYASLNHSVIGPNS- 221
ST+ ++ L D D D+ + E+ C EE KP I+ ++L+
Sbjct: 1247 STKSKNRKLPEPPDNEDEDEDVKAERLKVKELMGCQCCEE-KPSIMVSNLHKEYDDKKDF 1305
Query: 222 RLARNVKEAPTEYASICVR 240
L+R VK+ T+Y S CV+
Sbjct: 1306 LLSRKVKKVATKYISFCVK 1324
>gi|139948432 adlican [Homo sapiens]
Length = 2828
Score = 32.0 bits (71), Expect = 0.49
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 43 QSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHF 102
Q + ++L G P +L C VK + P + W +G+ D S + +S L
Sbjct: 486 QRDQTVLEGGPCQLSCNVK-ASESPSIFWVLPDGSILKAPMDDPDS--KFSILSSGWLRI 542
Query: 103 EPVLPNDNGSYRCSANFQSNL 123
+ + P+D+G Y+C A + +
Sbjct: 543 KSMEPSDSGLYQCIAQVRDEM 563
>gi|4826754 fibroblast growth factor binding protein 1 [Homo
sapiens]
Length = 234
Score = 32.0 bits (71), Expect = 0.49
Identities = 28/128 (21%), Positives = 59/128 (46%), Gaps = 15/128 (11%)
Query: 63 CANRPHVTWCKLNG--TTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYR---CSA 117
C H C G T+C+KL+D + WK+ ++ + + + + + C
Sbjct: 85 CTQLDHEFSCVFAGNPTSCLKLKDERVYWKQ---VARNLRSQKDICRYSKTAVKTRVCRK 141
Query: 118 NFQSNLIESHSTTLYVTGK-QNELSDTAGREINLVDAHLKSEQTEASTRQNSQVLLSETG 176
+F + ++ S+TL+ K + E ++ + RE H+K ++T S+ +Q + ++
Sbjct: 142 DFPESSLKLVSSTLFGNTKPRKEKTEMSPRE------HIKGKETTPSSLAVTQTMATKAP 195
Query: 177 IYDNDPDL 184
DPD+
Sbjct: 196 ECVEDPDM 203
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 31.2 bits (69), Expect = 0.84
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 30 GKESCDV---QLYIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQ 86
GK + DV ++I+ ++ S+ G L C V+ P + W +L+
Sbjct: 783 GKITLDVGSPPVFIQEPADVSMEIGSNVTLPCYVQGYPE-PTIKWRRLDNMPIFSRPFSV 841
Query: 87 TSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYVTG 135
+S + + + FIL+ + +D G+Y C A Q I+S TT+ VTG
Sbjct: 842 SSISQLRTGALFILN---LWASDKGTYICEAENQFGKIQS-ETTVTVTG 886
>gi|19923632 Kazal-type serine peptidase inhibitor domain 1
precursor [Homo sapiens]
Length = 304
Score = 30.4 bits (67), Expect = 1.4
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 27/146 (18%)
Query: 21 PYLDIWNIHGKE---SCDVQLYIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGT 77
PY D WN+ G++ C+V Y E D +++ P + PH++ G
Sbjct: 178 PY-DTWNVTGQDVIFGCEVFAYPMASIEWR---KDGLDIQLP----GDDPHISVQFRGGP 229
Query: 78 TCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYVTGKQ 137
++ T W L + V P+D G+YRC +E+ ++ +T Q
Sbjct: 230 QRFEV----TGW----------LQIQAVRPSDEGTYRCLGRNALGQVEAPASLTVLTPDQ 275
Query: 138 -NELSDTAGREINLV-DAHLKSEQTE 161
N R +NLV + +SE+ +
Sbjct: 276 LNSTGIPQLRSLNLVPEEEAESEEND 301
>gi|41352061 metalloprotease 1 [Homo sapiens]
Length = 1037
Score = 30.0 bits (66), Expect = 1.9
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 154 HLKSEQTEASTRQNSQVLLSETGIYDNDPDLCFRMQEGSEVYSNPCLEENKPGIVYASLN 213
H+ + + T + VL S + N PD+ MQ SE+++NPC EE + V +
Sbjct: 651 HVLPDDSHMDTYEQG-VLFSSLCLDRNLPDM---MQLWSEIFNNPCFEEEEHFKVLVKMT 706
Query: 214 HSVIGPNSRLARNVKEAPTEYASI 237
LA + ++ YASI
Sbjct: 707 ------AQELANGIPDSGHLYASI 724
>gi|59806363 hypothetical protein LOC9729 [Homo sapiens]
Length = 694
Score = 29.6 bits (65), Expect = 2.5
Identities = 43/187 (22%), Positives = 68/187 (36%), Gaps = 27/187 (14%)
Query: 31 KESCDVQLYIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWK 90
+E C Q I+++S H + D F E P N PH N + + + K
Sbjct: 176 EELCSFQEEIRKRSNHRRMKSDSFLQEMP--NVTNIPHGDPMINNDQCILPISLEKEKQK 233
Query: 91 EEKNISFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYVTGKQNELSD-----TAG 145
KN+S C+ QSN + + K+NE +
Sbjct: 234 NRKNLS------------------CTNVLQSNSTKKCGIDT-IDLKRNETPPVPPPRSTS 274
Query: 146 REINLVDAHLKSEQTEASTRQNSQVLLSETGIYDNDPDLCFRMQEGSEVYSNPCLEENKP 205
R D+ E+ + NS V + +P R QE S +Y N + +K
Sbjct: 275 RNFPSSDSEQAYERWKERLDHNSWVPHEGRSKRNYNPHFPLRQQEMSMLYPNEG-KTSKD 333
Query: 206 GIVYASL 212
GI+++SL
Sbjct: 334 GIIFSSL 340
>gi|239754269 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1531
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 126 SHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEAST 164
S +TT+Y+TG + + T G E V SE T AST
Sbjct: 1101 SETTTVYITGSKTTTASTEGSEATTVST-TSSETTTAST 1138
>gi|169168665 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1521
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 126 SHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEAST 164
S +TT+Y+TG + + T G E V SE T AST
Sbjct: 1101 SETTTVYITGSKTTTASTEGSEATTVST-TSSETTTAST 1138
>gi|113417486 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 126 SHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEAST 164
S +TT+Y+TG + + T G E V SE T AST
Sbjct: 1101 SETTTVYITGSKTTTASTEGSEATTVST-TSSETTTAST 1138
>gi|239740898 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1542
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 126 SHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEAST 164
S +TT+Y+TG + + T G E V SE T AST
Sbjct: 1122 SETTTVYITGSKTTTASTEGSEATTVST-TSSETTTAST 1159
>gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo
sapiens]
Length = 1521
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 126 SHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEAST 164
S +TT+Y+TG + + T G E V SE T AST
Sbjct: 1101 SETTTVYITGSKTTTASTEGSEATTVST-TSSETTTAST 1138
>gi|239740777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 126 SHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEAST 164
S +TT+Y+TG + + T G E V SE T AST
Sbjct: 1101 SETTTVYITGSKTTTASTEGSEATTVST-TSSETTTAST 1138
>gi|239740724 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1704
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 126 SHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEAST 164
S +TT+Y+TG + + T G E V SE T AST
Sbjct: 1101 SETTTVYITGSKTTTASTEGSEATTVST-TSSETTTAST 1138
>gi|239740674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1531
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 126 SHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEAST 164
S +TT+Y+TG + + T G E V SE T AST
Sbjct: 1101 SETTTVYITGSKTTTASTEGSEATTVST-TSSETTTAST 1138
>gi|239740645 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1531
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 126 SHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEAST 164
S +TT+Y+TG + + T G E V SE T AST
Sbjct: 1101 SETTTVYITGSKTTTASTEGSEATTVST-TSSETTTAST 1138
>gi|239513940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1521
Score = 29.6 bits (65), Expect = 2.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 126 SHSTTLYVTGKQNELSDTAGREINLVDAHLKSEQTEAST 164
S +TT+Y+TG + + T G E V SE T AST
Sbjct: 1101 SETTTVYITGSKTTTASTEGSEATTVST-TSSETTTAST 1138
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,759,792
Number of Sequences: 37866
Number of extensions: 432716
Number of successful extensions: 1203
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1081
Number of HSP's gapped (non-prelim): 170
length of query: 241
length of database: 18,247,518
effective HSP length: 99
effective length of query: 142
effective length of database: 14,498,784
effective search space: 2058827328
effective search space used: 2058827328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.