Guide to the Human Genome
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Name: ZNF740 Sequence: fasta or formatted (193aa) NCBI GI: 51972182
Description:

zinc finger protein 740

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         11           2
 C cysteine            5.7         11           1
 D aspartate           5.2         10           3
 E glutamate           5.7         11           1
 F phenylalanine       4.1          8           1
 G glycine             5.7         11           1
 H histidine           5.7         11           1
 I isoleucine          3.1          6           1
 K lysine              9.8         19           2
 L leucine             6.7         13           2
 M methionine          2.6          5           2
 N asparagine          1.6          3           1
 P proline             2.6          5           1
 Q glutamine           6.2         12           1
 R arginine            7.8         15           1
 S serine             11.9         23           2
 T threonine           2.6          5           1
 V valine              5.7         11           4
 W tryptophan          0.0          0           0
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 740 
ZNF148                0.340   zinc finger protein 148 
ZNF281                0.283   zinc finger protein 281 
ZNF681                0.201   zinc finger protein 681 
ZNF468                0.195   zinc finger protein ZNF468 isoform 1 
ZNF468                0.195   zinc finger protein ZNF468 isoform 2 
ZSCAN16               0.190   zinc finger and SCAN domain containing 16 
ZNF470                0.190   zinc finger protein 470 
ZNF678                0.187   zinc finger protein 678 
ZNF107                0.184   zinc finger protein 107 
ZNF107                0.184   zinc finger protein 107 
ZNF16                 0.184   zinc finger protein 16 
ZNF16                 0.184   zinc finger protein 16 
ZNF808                0.184   zinc finger protein 808 
ZNF429                0.182   zinc finger protein 429 
ZFP28                 0.182   zinc finger protein 28 
ZNF790                0.182   zinc finger protein 790 
ZNF28                 0.182   zinc finger protein 28 
ZNF233                0.182   zinc finger protein 233 
ZNF726                0.182   PREDICTED: zinc finger protein 726 
ZNF726                0.182   PREDICTED: zinc finger protein 726 
ZNF726                0.182   PREDICTED: zinc finger protein 726 
ZNF836                0.182   zinc finger protein 836 
ZNF454                0.182   zinc finger protein 454 
LOC100292052          0.179   PREDICTED: similar to hCG1773661 
LOC100287226          0.179   PREDICTED: similar to hCG1773661 
LOC100287226          0.179   PREDICTED: hypothetical protein XP_002343677 
ZNF22                 0.179   zinc finger protein 22 (KOX 15) 
ZNF594                0.179   zinc finger protein 594 
ZNF257                0.179   zinc finger protein 257 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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