Guide to the Human Genome
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Name: ZNF22 Sequence: fasta or formatted (224aa) NCBI GI: 42714596
Description:

zinc finger protein 22 (KOX 15)

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.7          6           1
 C cysteine            5.4         12           1
 D aspartate           2.7          6           2
 E glutamate           5.4         12           2
 F phenylalanine       4.0          9           2
 G glycine             7.1         16           1
 H histidine           6.2         14           1
 I isoleucine          4.0          9           1
 K lysine             12.5         28           2
 L leucine             4.5         10           1
 M methionine          1.3          3           1
 N asparagine          1.8          4           1
 P proline             3.1          7           1
 Q glutamine           8.0         18           1
 R arginine            8.9         20           2
 S serine             12.5         28           3
 T threonine           5.4         12           1
 V valine              1.3          3           1
 W tryptophan          0.9          2           1
 Y tyrosine            2.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 22 (KOX 15) 
ZNF3                  0.448   zinc finger protein 3 isoform 2 
ZNF135                0.441   zinc finger protein 135 
ZNF551                0.441   zinc finger protein 551 
ZNF418                0.439   zinc finger protein 418 
ZFP2                  0.437   zinc finger protein 2 homolog 
ZNF184                0.435   zinc finger protein 184 
ZNF708                0.432   zinc finger protein 708 
ZNF34                 0.432   zinc finger protein 34 
ZNF436                0.432   zinc finger protein 436 
ZNF436                0.432   zinc finger protein 436 
ZNF79                 0.430   zinc finger protein 79 
ZNF93                 0.428   zinc finger protein 93 
ZNF681                0.428   zinc finger protein 681 
ZNF397                0.426   zinc finger protein 397 isoform 1 
ZNF286B               0.424   zinc finger protein 286B 
ZNF383                0.424   zinc finger protein 383 
ZNF167                0.424   zinc finger protein 167 isoform 1 
LOC647678             0.424   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.424   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.424   PREDICTED: hypothetical protein XP_002343697 
ZNF286A               0.421   zinc finger protein 286 
ZNF286A               0.421   zinc finger protein 286 
ZSCAN29               0.421   zinc finger protein 690 
ZNF214                0.421   zinc finger protein 214 
ZNF502                0.421   zinc finger protein 502 
ZNF502                0.421   zinc finger protein 502 
ZNF502                0.421   zinc finger protein 502 
ZNF502                0.421   zinc finger protein 502 
ZNF16                 0.421   zinc finger protein 16 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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