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Search of human proteins with 144953903
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|144953903 developmental pluripotency associated 4 [Homo
sapiens]
(304 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|144953903 developmental pluripotency associated 4 [Homo sapiens] 619 e-177
gi|239835767 developmental pluripotency associated 2 [Homo sapiens] 202 2e-52
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 40 0.003
gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH po... 37 0.028
gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH po... 37 0.028
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 34 0.14
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 34 0.14
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 34 0.14
gi|223029422 SKI-like isoform 3 [Homo sapiens] 32 0.53
gi|223029418 SKI-like isoform 1 [Homo sapiens] 32 0.53
gi|21361337 eukaryotic translation initiation factor 5 [Homo sap... 32 0.53
gi|37537716 eukaryotic translation initiation factor 5 [Homo sap... 32 0.53
gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens] 32 0.91
gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 32 0.91
gi|116235478 establishment of cohesion 1 homolog 1 [Homo sapiens] 31 1.2
gi|6912246 CD3E antigen, epsilon polypeptide associated protein ... 31 1.2
gi|124517695 ankyrin repeat domain 36B [Homo sapiens] 31 1.2
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 31 1.6
gi|187936958 UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 ... 31 1.6
gi|11225260 DNA topoisomerase I [Homo sapiens] 30 2.0
gi|6912446 potassium voltage-gated channel, subfamily H, member ... 30 2.0
gi|17978466 cyclin T1 [Homo sapiens] 30 2.0
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 30 2.0
gi|125625357 Sp2 transcription factor [Homo sapiens] 30 2.0
gi|45580730 aminoadipate-semialdehyde dehydrogenase [Homo sapiens] 30 2.0
gi|154813195 DENN/MADD domain containing 2A [Homo sapiens] 30 2.0
gi|83367077 mucin 16 [Homo sapiens] 30 2.6
gi|169204821 PREDICTED: hypothetical protein [Homo sapiens] 30 2.6
gi|169163827 PREDICTED: similar to UPF0634 protein KIAA1641 [Hom... 30 2.6
gi|169205432 PREDICTED: hypothetical protein [Homo sapiens] 30 2.6
>gi|144953903 developmental pluripotency associated 4 [Homo sapiens]
Length = 304
Score = 619 bits (1595), Expect = e-177
Identities = 304/304 (100%), Positives = 304/304 (100%)
Query: 1 MLRGSASSTSMEKAKGKEWTSTEKSREEDQQASNQPNSIALPGTSAKRTKEKMSIKGSKV 60
MLRGSASSTSMEKAKGKEWTSTEKSREEDQQASNQPNSIALPGTSAKRTKEKMSIKGSKV
Sbjct: 1 MLRGSASSTSMEKAKGKEWTSTEKSREEDQQASNQPNSIALPGTSAKRTKEKMSIKGSKV 60
Query: 61 LCPKKKAEHTDNPRPQKKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKR 120
LCPKKKAEHTDNPRPQKKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKR
Sbjct: 61 LCPKKKAEHTDNPRPQKKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKR 120
Query: 121 LCAFAYPNQKDFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEVALPPVGEPPALE 180
LCAFAYPNQKDFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEVALPPVGEPPALE
Sbjct: 121 LCAFAYPNQKDFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEVALPPVGEPPALE 180
Query: 181 NSTALLEGVNTVVVTTSAPEALLASWARISARARTPEAVESPQEASGVRWCVVHGKSLPA 240
NSTALLEGVNTVVVTTSAPEALLASWARISARARTPEAVESPQEASGVRWCVVHGKSLPA
Sbjct: 181 NSTALLEGVNTVVVTTSAPEALLASWARISARARTPEAVESPQEASGVRWCVVHGKSLPA 240
Query: 241 DTDGWVHLQFHAGQAWVPEKQEGRVSALFLLPASNFPPPHLEDNMLCPKCVHRNKVLIKS 300
DTDGWVHLQFHAGQAWVPEKQEGRVSALFLLPASNFPPPHLEDNMLCPKCVHRNKVLIKS
Sbjct: 241 DTDGWVHLQFHAGQAWVPEKQEGRVSALFLLPASNFPPPHLEDNMLCPKCVHRNKVLIKS 300
Query: 301 LQWE 304
LQWE
Sbjct: 301 LQWE 304
>gi|239835767 developmental pluripotency associated 2 [Homo sapiens]
Length = 298
Score = 202 bits (515), Expect = 2e-52
Identities = 118/241 (48%), Positives = 146/241 (60%), Gaps = 34/241 (14%)
Query: 75 PQK---KIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQK- 130
PQK KIP PLP+ LPP+N + RD LR WCQQL LS+ G+K++ Y RL AYP Q+
Sbjct: 73 PQKARCKIPALPLPTILPPINKVCRDTLRDWCQQLGLSTNGKKIEVYLRLHRHAYPEQRQ 132
Query: 131 DFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEVALPPVGEPPALENSTALLEGVN 190
D P ++E ++++ +K+ V K +S E N A E N
Sbjct: 133 DMPEMSQETRLQRCSRKRKAVTKRARLQRSYEM-----------------NERA--EETN 173
Query: 191 TVVVTTSAPEALLASWARISARARTPEAVESPQ----------EASGVRWCVVHGKSLPA 240
TV V TSAP A+LASWARI+ARA P+A+ S +ASGVRWCVVHG+ L A
Sbjct: 174 TVEVITSAPGAMLASWARIAARAVQPKALNSCSIPVSVEAFLMQASGVRWCVVHGRLLSA 233
Query: 241 DTDGWVHLQFHAGQAWVPEKQEGRVSALFLLPASNFPPPHLEDNMLCPKCVHRNKVLIKS 300
DT GWV LQFHAGQAWVP R+ +LFLLPA FP P +EDNMLCP C RNK ++K
Sbjct: 234 DTKGWVRLQFHAGQAWVPTTHR-RMISLFLLPACIFPSPGIEDNMLCPDCAKRNKKMMKR 292
Query: 301 L 301
L
Sbjct: 293 L 293
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 40.0 bits (92), Expect = 0.003
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 5/151 (3%)
Query: 72 NPRPQKKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQKD 131
+P P K +P + P N+I ++ CQ++K + +LD P + D
Sbjct: 1168 DPVPSKLLPFEGPGLESPRPNIILGLVI---CQKIKRPANSGELDKMDEKRTRLQPEEAD 1224
Query: 132 FPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHP-PEVALPPVGEPPALENSTALLEGV- 189
P+ K A + +S +K K S T P PP+ EPP L+ ++L
Sbjct: 1225 VPAYPKVATVPQSEKKPSKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLKVLSSLKPAAP 1284
Query: 190 NTVVVTTSAPEALLASWARISARARTPEAVE 220
+ T+A A A+ + S+ ++T +E
Sbjct: 1285 SPATAATTAAAASTAASSTASSASKTASPLE 1315
>gi|239747793 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 868
Score = 36.6 bits (83), Expect = 0.028
Identities = 33/154 (21%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 20 TSTEKSREEDQQASNQPNSIALPGTSAKRTKE---KMSIKGSKVLCPKKKAEHTDNPRPQ 76
+S S + D N N I L + K+ + IK + LC K+ E DN Q
Sbjct: 287 SSQTVSEDGDSLCCNCKNVILLIDQHEMKCKDCVHLLKIKKTFCLC-KRLTELKDNHCEQ 345
Query: 77 KKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQKDFPSTA 136
++ I L +K +++ + + +++K K + L+ K LC+ + Q++
Sbjct: 346 LRVKIRKLKNK---ASVLQKRLSEK--EEIKSQLKHETLELEKELCSLRFAIQQEKKKRR 400
Query: 137 KEAKIRKSLQKKLKVEKGETSLQSSETHPPEVAL 170
++ + +++KL++ + + +++ T P + AL
Sbjct: 401 NVEELHQKVREKLRITEEQYRIEADVTKPIKPAL 434
>gi|239741673 PREDICTED: protein immuno-reactive with anti-PTH
polyclonal antibodies [Homo sapiens]
Length = 1430
Score = 36.6 bits (83), Expect = 0.028
Identities = 33/154 (21%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 20 TSTEKSREEDQQASNQPNSIALPGTSAKRTKE---KMSIKGSKVLCPKKKAEHTDNPRPQ 76
+S S + D N N I L + K+ + IK + LC K+ E DN Q
Sbjct: 849 SSQTVSEDGDSLCCNCKNVILLIDQHEMKCKDCVHLLKIKKTFCLC-KRLTELKDNHCEQ 907
Query: 77 KKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQKDFPSTA 136
++ I L +K +++ + + +++K K + L+ K LC+ + Q++
Sbjct: 908 LRVKIRKLKNK---ASVLQKRLSEK--EEIKSQLKHETLELEKELCSLRFAIQQEKKKRR 962
Query: 137 KEAKIRKSLQKKLKVEKGETSLQSSETHPPEVAL 170
++ + +++KL++ + + +++ T P + AL
Sbjct: 963 NVEELHQKVREKLRITEEQYRIEADVTKPIKPAL 996
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 34.3 bits (77), Expect = 0.14
Identities = 56/229 (24%), Positives = 80/229 (34%), Gaps = 29/229 (12%)
Query: 73 PRPQKKIPIPPL---PSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQ 129
P P K PP P+ +P V + A QL +++GQ+L L F P +
Sbjct: 156 PPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQI--LQTFQQPPK 213
Query: 130 KDFPSTAKEAKIR-KSLQKKLKVEKGETSLQSSETHPPEVA----------LPPVGEPPA 178
P+ + +++ +LK + S Q + PPE EP A
Sbjct: 214 PQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEA 273
Query: 179 LENSTALLEGVNTVVVTTSAPEALLASWARISARARTPEAVESPQEASGVRWCVVHGKSL 238
+E S + +T VTT+AP A + + A A SP G
Sbjct: 274 VEES----KKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQ 329
Query: 239 PADTDGWVHLQFHAGQAW---------VPEKQEGRVSALFLLPASNFPP 278
PA T QF VP G++ LLP FPP
Sbjct: 330 PAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPP 378
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 34.3 bits (77), Expect = 0.14
Identities = 56/229 (24%), Positives = 80/229 (34%), Gaps = 29/229 (12%)
Query: 73 PRPQKKIPIPPL---PSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQ 129
P P K PP P+ +P V + A QL +++GQ+L L F P +
Sbjct: 141 PPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQI--LQTFQQPPK 198
Query: 130 KDFPSTAKEAKIR-KSLQKKLKVEKGETSLQSSETHPPEVA----------LPPVGEPPA 178
P+ + +++ +LK + S Q + PPE EP A
Sbjct: 199 PQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEA 258
Query: 179 LENSTALLEGVNTVVVTTSAPEALLASWARISARARTPEAVESPQEASGVRWCVVHGKSL 238
+E S + +T VTT+AP A + + A A SP G
Sbjct: 259 VEES----KKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQ 314
Query: 239 PADTDGWVHLQFHAGQAW---------VPEKQEGRVSALFLLPASNFPP 278
PA T QF VP G++ LLP FPP
Sbjct: 315 PAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPP 363
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 34.3 bits (77), Expect = 0.14
Identities = 56/229 (24%), Positives = 80/229 (34%), Gaps = 29/229 (12%)
Query: 73 PRPQKKIPIPPL---PSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQ 129
P P K PP P+ +P V + A QL +++GQ+L L F P +
Sbjct: 156 PPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQI--LQTFQQPPK 213
Query: 130 KDFPSTAKEAKIR-KSLQKKLKVEKGETSLQSSETHPPEVA----------LPPVGEPPA 178
P+ + +++ +LK + S Q + PPE EP A
Sbjct: 214 PQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEA 273
Query: 179 LENSTALLEGVNTVVVTTSAPEALLASWARISARARTPEAVESPQEASGVRWCVVHGKSL 238
+E S + +T VTT+AP A + + A A SP G
Sbjct: 274 VEES----KKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQ 329
Query: 239 PADTDGWVHLQFHAGQAW---------VPEKQEGRVSALFLLPASNFPP 278
PA T QF VP G++ LLP FPP
Sbjct: 330 PAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPP 378
>gi|223029422 SKI-like isoform 3 [Homo sapiens]
Length = 664
Score = 32.3 bits (72), Expect = 0.53
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 5 SASSTSMEKAKGKEWTSTEKSREEDQQASNQPNSIALPGTSAKRTKEKMSIKGSKVLCPK 64
SA S S E K + S + E+ + +++ P S + +EKM +K S+ LC +
Sbjct: 397 SAVSQSKELTKTEASKSISRQSEKAHSSGKLQKTVSYPDVSLEE-QEKMDLKTSRELCSR 455
Query: 65 KKAEHTDNPRPQKK 78
A ++N ++K
Sbjct: 456 LDASISNNSTSKRK 469
>gi|223029418 SKI-like isoform 1 [Homo sapiens]
Length = 684
Score = 32.3 bits (72), Expect = 0.53
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 5 SASSTSMEKAKGKEWTSTEKSREEDQQASNQPNSIALPGTSAKRTKEKMSIKGSKVLCPK 64
SA S S E K + S + E+ + +++ P S + +EKM +K S+ LC +
Sbjct: 417 SAVSQSKELTKTEASKSISRQSEKAHSSGKLQKTVSYPDVSLEE-QEKMDLKTSRELCSR 475
Query: 65 KKAEHTDNPRPQKK 78
A ++N ++K
Sbjct: 476 LDASISNNSTSKRK 489
>gi|21361337 eukaryotic translation initiation factor 5 [Homo
sapiens]
Length = 431
Score = 32.3 bits (72), Expect = 0.53
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 115 LDAYKRLCAFAYPN--QKDFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEVALPP 172
LD + +LC F N + T K+ K +K+ + K +K S+ SSET PP
Sbjct: 131 LDTHHKLCTFILKNPPENSDSGTGKKEKEKKNRKGK---DKENGSVSSSETPPPPPPPNE 187
Query: 173 VGEPP 177
+ PP
Sbjct: 188 INPPP 192
>gi|37537716 eukaryotic translation initiation factor 5 [Homo
sapiens]
Length = 431
Score = 32.3 bits (72), Expect = 0.53
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 115 LDAYKRLCAFAYPN--QKDFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEVALPP 172
LD + +LC F N + T K+ K +K+ + K +K S+ SSET PP
Sbjct: 131 LDTHHKLCTFILKNPPENSDSGTGKKEKEKKNRKGK---DKENGSVSSSETPPPPPPPNE 187
Query: 173 VGEPP 177
+ PP
Sbjct: 188 INPPP 192
>gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens]
Length = 739
Score = 31.6 bits (70), Expect = 0.91
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 21/141 (14%)
Query: 57 GSKVLCPKKKAEHTDNPRPQKKIPIPPLPSKLPPVN---LIHRDILRAWCQ------QLK 107
G K C E +NP P++ PPLP+ P L + + + ++
Sbjct: 59 GHKERCIAASLE-LNNPVPEQ----PPLPTSESPFAWSPLAGEKFVEVYKEAHLLALHIE 113
Query: 108 LSSKGQKLDAYKRLCAFAYPNQKDFPSTAKEAKIRKSL-QKKLKVEKGETSLQSSETHPP 166
SS+ Q A K P + +E+K++ +L +K+ +++K TSL+ +
Sbjct: 114 SSSRNQAAQAAKP----EDPRSQGVERFIQESKLKINLFEKEKEMKKSPTSLKRETYYLS 169
Query: 167 EVAL--PPVGEPPALENSTAL 185
+ L PPVGEP L +S AL
Sbjct: 170 DSPLLGPPVGEPRLLASSPAL 190
Score = 29.3 bits (64), Expect = 4.5
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 2 LRGSASSTSMEKAKGKEWTSTEKSREE-DQQASNQPNSIALPGTSAKRTKEKMSIKGSKV 60
L S + + +A G ++ RE A++Q + PGT + S++G +
Sbjct: 190 LPSSGAQARLTRAPGPPHSAHALPRESCTAHAASQAATQRKPGTKLLLPRAA-SVRGRSI 248
Query: 61 LCPKKKAEHTDNPRPQKKIPIPPLPSKLPPVNLIHRDIL 99
+K P+K+IP P +K+P HRD+L
Sbjct: 249 PGAAEK--------PKKEIPASPSRTKIPAEKESHRDVL 279
>gi|239741684 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 1524
Score = 31.6 bits (70), Expect = 0.91
Identities = 31/153 (20%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 20 TSTEKSREEDQQASNQPNSIALPGTSAKRTKEKMSI-KGSKVLCP-KKKAEHTDNPRPQK 77
+S S + D N N I L + K+ + + K C K+ + DN Q
Sbjct: 943 SSQTVSEDGDSLCCNCKNVILLIDQHEMKCKDCVHLLKIKNTFCLWKRLIKLKDNHCEQL 1002
Query: 78 KIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQKDFPSTAK 137
++ I L +K +++ + I +++K K + L+ K LC+ + Q++
Sbjct: 1003 RVKIRKLKNK---ASVLQKRISEK--EEIKSQLKHEILELEKELCSLRFAIQQEKKKRRN 1057
Query: 138 EAKIRKSLQKKLKVEKGETSLQSSETHPPEVAL 170
++ + +++KL++ + + +++ T P + AL
Sbjct: 1058 VEEVHQKVREKLRITEEQYRIEADVTKPIKPAL 1090
>gi|116235478 establishment of cohesion 1 homolog 1 [Homo sapiens]
Length = 840
Score = 31.2 bits (69), Expect = 1.2
Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 2 LRGSASSTSMEKAKGKEWTSTEKSREEDQQASNQP-------NSIALPGTSAKRTKEKMS 54
++ A S+S K E T S + ASN N++ + G S + TK+K+S
Sbjct: 45 IKSQAKSSSESKINQPE-LETRMSTRSSKAASNDKATKSINKNTVTVRGYSQESTKKKLS 103
Query: 55 IKGSKVLCPKKKAEHTDNPRPQKKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQK 114
K K++ KA N R Q +L + + R LR+ Q ++ + Q
Sbjct: 104 QK--KLVHENPKANEQLNRRSQ----------RLQQLTEVSRRSLRSREIQGQVQAVKQS 151
Query: 115 LDAYKRLCAFAYPNQKDFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHP---PEVALP 171
L P K ++ ++K K+ QK +K + E S E EV
Sbjct: 152 L-----------PPTKKEQCSSTQSKSNKTSQKHVKRKVLEVKSDSKEDENLVINEVINS 200
Query: 172 PVGEPPALENSTA 184
P G+ +E+ TA
Sbjct: 201 PKGKKRKVEHQTA 213
>gi|6912246 CD3E antigen, epsilon polypeptide associated protein
[Homo sapiens]
Length = 510
Score = 31.2 bits (69), Expect = 1.2
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 2 LRGSASSTSMEKAKGKE---WTSTEKSR--EEDQQASNQPNSIALPGTSAKRTKEKMSIK 56
L A+ TS +K K K+ T TE + E + QP + A PG++ KR K+ +
Sbjct: 412 LEPQAAPTSTKKKKKKKERGHTVTEPIQPLEPELPGEGQPEARATPGSTKKRKKQSQESR 471
Query: 57 GSKVLCPKKKAEHTDNPRPQKKIPIPPLPSK 87
+ + PQ+++P PPL S+
Sbjct: 472 MPETV-------------PQEEMPGPPLNSE 489
>gi|124517695 ankyrin repeat domain 36B [Homo sapiens]
Length = 1121
Score = 31.2 bits (69), Expect = 1.2
Identities = 31/153 (20%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 20 TSTEKSREEDQQASNQPNSIALPGTSAKRTKEKMSI-KGSKVLCP-KKKAEHTDNPRPQK 77
+S S + D N N I L + K+ + + K C K+ + DN Q
Sbjct: 540 SSQTVSEDGDSLCCNCKNVILLIDQHEMKCKDCVHLLKIKNTFCLWKRLIKLKDNHCEQL 599
Query: 78 KIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQKDFPSTAK 137
++ I L +K +++ + I +++K K + L+ K LC+ + Q++
Sbjct: 600 RVKIRKLKNK---ASVLQKRISEK--EEIKSQLKHEILELEKELCSLRFAIQQEKKKRRN 654
Query: 138 EAKIRKSLQKKLKVEKGETSLQSSETHPPEVAL 170
++ + +++KL++ + + +++ T P + AL
Sbjct: 655 VEELHQKVREKLRITEEQYRIEADVTKPIKPAL 687
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 30.8 bits (68), Expect = 1.6
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 5 SASSTSMEKAKGKEWTSTEKSREEDQQASNQPNSIALP--GTSAKRTKEKMSIKGSKVLC 62
S+SS+S + +S+ + +ED S+ + P G SA+ + K +
Sbjct: 2652 SSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKAR 2711
Query: 63 PKKKAEHTDNPRPQKKIPIPPLPSK 87
P + P PQ + P PP P++
Sbjct: 2712 PSAHSPGKKTPAPQPQAP-PPQPTQ 2735
>gi|187936958 UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
[Homo sapiens]
Length = 507
Score = 30.8 bits (68), Expect = 1.6
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 125 AYPNQKDFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEV-ALPPVGEPPAL 179
A P +D P TA++A + + + L+ G L + PE+ +LPP G+PPA+
Sbjct: 412 AEPADRDSPRTARQALLTQHYRWALRA--GARFLDAHGAWLPELPSLPPNGDPPAI 465
>gi|11225260 DNA topoisomerase I [Homo sapiens]
Length = 765
Score = 30.4 bits (67), Expect = 2.0
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 12 EKAKGKEWTSTEKSREEDQQASNQPNSIALPGTSAKRTKEKMSIKGSKVLCPKKKAEHTD 71
+K K +E E +E+D++ S NS S K+ KEK K K K +H D
Sbjct: 26 DKHKDREHRHKEHKKEKDREKSKHSNSEHKD--SEKKHKEKEKTKHKDGSSEKHKDKHKD 83
Query: 72 NPRPQKK 78
+ ++K
Sbjct: 84 RDKEKRK 90
>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
[Homo sapiens]
Length = 1017
Score = 30.4 bits (67), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 252 AGQAWVPEKQEGRVSALFLLPASNFPPPHLEDNML----CPKCV 291
AG AW P+ ++ L P ++ PPP L+D L CP V
Sbjct: 919 AGSAWTPDPPCPQLRPPCLSPCASRPPPSLQDTTLAEVHCPASV 962
>gi|17978466 cyclin T1 [Homo sapiens]
Length = 726
Score = 30.4 bits (67), Expect = 2.0
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Query: 5 SASSTSMEKAKGKEWTSTEKS-REEDQQASNQPNSIALPGTS-----------AKRTKEK 52
S++ TS+E GK W S++ S + E Q ++AL G + +
Sbjct: 320 SSNLTSVEMLPGKRWLSSQPSFKLEPTQGHRTSENLALTGVDHSLPQDGSNAFISQKQNS 379
Query: 53 MSIKGSKVLCPKKKAEHTDNPRPQKK 78
S+ +KV + +A+H + QK+
Sbjct: 380 KSVPSAKVSLKEYRAKHAEELAAQKR 405
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 30.4 bits (67), Expect = 2.0
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 7/150 (4%)
Query: 27 EEDQQASNQPNSIALPGTSAKRTKEKMSIKGSKVLCPKKKA---EHTDNPRPQKKIPIPP 83
++D AS+ + + SAK + K+ G KKKA + D+ ++++ PP
Sbjct: 42 QQDANASSLLDIYSFWLKSAKVPERKLQANGPVAKKAKKKASSSDSEDSSEEEEEVQGPP 101
Query: 84 LPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQKDFPSTAKEAKIRK 143
P + +A + + SS + D P QK +AK K
Sbjct: 102 AKKAAVPAKRVGLPPGKAAAKASESSSSEESSDDDDEEDQKKQPVQK---GVKPQAKAAK 158
Query: 144 SLQKKLKVEKGETSLQSSETHPPEVALPPV 173
+ KK K ++ SSE PP+ P +
Sbjct: 159 APPKKAKSSDSDSD-SSSEDEPPKNQKPKI 187
>gi|125625357 Sp2 transcription factor [Homo sapiens]
Length = 613
Score = 30.4 bits (67), Expect = 2.0
Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 18/126 (14%)
Query: 73 PRPQKKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQKDF 132
P P+K +PI P P L P LSSKG L + +YP +
Sbjct: 62 PTPRKLVPIKPAPLPLSPGKNSFG----------ILSSKGNILQIQGSQLSASYPGGQLV 111
Query: 133 PSTAKEAKIRKSLQKKLKVE-KGETSLQSSETHPPEVALPPVGEPPALENSTALLEGVNT 191
+ I K + ++ + +Q+S + +V P L N ++ G N
Sbjct: 112 FAIQNPTMINKGTRSNANIQYQAVPQIQASNSQTIQV-------QPNLTNQIQIIPGTNQ 164
Query: 192 VVVTTS 197
++T S
Sbjct: 165 AIITPS 170
>gi|45580730 aminoadipate-semialdehyde dehydrogenase [Homo sapiens]
Length = 1098
Score = 30.4 bits (67), Expect = 2.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 253 GQAWVPEKQEGRVSALFLLPASNFPPPHLEDNMLCPKC 290
G+ W+ E Q G++ +++ LP F P + ++ML C
Sbjct: 1045 GKVWILESQSGQLQSVYELPGEVFSSPVVLESMLIIGC 1082
>gi|154813195 DENN/MADD domain containing 2A [Homo sapiens]
Length = 1009
Score = 30.4 bits (67), Expect = 2.0
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 18/106 (16%)
Query: 72 NPRPQKKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQKD 131
N P +P PPLPS PP + ++R R W + K S+ +K +Y +
Sbjct: 295 NLPPLPSLPPPPLPSS-PPPSSVNR---RLWTGRQKSSADHRK----------SYEFEDL 340
Query: 132 FPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEVALPPVGEPP 177
S+++ +++ Q KL G T S E ++ PP+ E P
Sbjct: 341 LQSSSESSRVDWYAQTKL----GLTRTLSEENVYEDILDPPMKENP 382
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 30.0 bits (66), Expect = 2.6
Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 18/137 (13%)
Query: 133 PSTAK--EAKIRKSLQKKLKVEKGETSLQSSETHPPEVALPPVGEP---------PALEN 181
P TAK +A ++ Q L E TS +E + P + E + +
Sbjct: 3840 PHTAKTPDATFQRQGQTALTTEARATSDSWNEKEKSTPSAPWITEMMNSVSEDTIKEVTS 3899
Query: 182 STALLEGVNTVVVTTSAPEALLASWARISARARTPEAVESPQEASGVRWCVVHGKSLPAD 241
S+++L +NT+ + + SW P + +EA +H + +
Sbjct: 3900 SSSVLRTLNTLDINLESGTTSSPSWKSSPYERIAPSESTTDKEA-------IHPSTNTVE 3952
Query: 242 TDGWVHLQFHAGQAWVP 258
T GWV HA + +P
Sbjct: 3953 TTGWVTSSEHASHSTIP 3969
>gi|169204821 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 30.0 bits (66), Expect = 2.6
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 29 DQQASNQPNSIALPGTSAKRTKEKMSIKGSKVLCPKKKAEHTDNPRPQKKIPIPPLPSKL 88
D AS +P + P + T+ +G+ L ++ D PRP P+ P PS L
Sbjct: 51 DGLASGRPGLLGAPAPAPALTQHPSLPQGAGALPAGRR--RPDRPRPAPPWPLSPRPSHL 108
Query: 89 P 89
P
Sbjct: 109 P 109
>gi|169163827 PREDICTED: similar to UPF0634 protein KIAA1641 [Homo
sapiens]
Length = 475
Score = 30.0 bits (66), Expect = 2.6
Identities = 21/107 (19%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 64 KKKAEHTDNPRPQKKIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCA 123
K+ + DN Q ++ I L +K +++ + I +++K K + L+ K LC+
Sbjct: 39 KRLIKLKDNHCEQLRVKIRKLKNK---ASVLQKRISEK--EEIKSQLKHEILELEKELCS 93
Query: 124 FAYPNQKDFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEVAL 170
+ Q++ ++ + +++KL++ + + +++ T P + AL
Sbjct: 94 LRFAIQQEKKKRRNVEELHQKVREKLRITEEQYRIEADVTKPIKPAL 140
>gi|169205432 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 30.0 bits (66), Expect = 2.6
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 29 DQQASNQPNSIALPGTSAKRTKEKMSIKGSKVLCPKKKAEHTDNPRPQKKIPIPPLPSKL 88
D AS +P + P + T+ +G+ L ++ D PRP P+ P PS L
Sbjct: 51 DGLASGRPGLLGAPAPAPALTQHPSLPQGAGALPAGRR--RPDRPRPAPPWPLSPRPSHL 108
Query: 89 P 89
P
Sbjct: 109 P 109
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,642,399
Number of Sequences: 37866
Number of extensions: 672838
Number of successful extensions: 2930
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 2855
Number of HSP's gapped (non-prelim): 150
length of query: 304
length of database: 18,247,518
effective HSP length: 102
effective length of query: 202
effective length of database: 14,385,186
effective search space: 2905807572
effective search space used: 2905807572
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.