Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 144953876
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|144953876 signal-regulatory protein beta 1 isoform 1
precursor [Homo sapiens]
(398 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 804 0.0
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 712 0.0
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi... 609 e-174
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi... 609 e-174
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi... 609 e-174
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ... 608 e-174
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ... 422 e-118
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso... 294 1e-79
gi|239751927 PREDICTED: similar to signal-regulatory protein bet... 244 1e-64
gi|169217521 PREDICTED: similar to signal-regulatory protein bet... 240 1e-63
gi|94538337 signal-regulatory protein gamma isoform 2 precursor ... 234 1e-61
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] 154 2e-37
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ... 154 2e-37
gi|30425382 signal-regulatory protein delta [Homo sapiens] 135 6e-32
gi|239751925 PREDICTED: similar to signal-regulatory protein alp... 127 2e-29
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ... 116 3e-26
gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo sa... 98 1e-20
gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo sa... 94 2e-19
gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens] 63 5e-10
gi|11056046 cell adhesion molecule 3 isoform 1 [Homo sapiens] 63 5e-10
gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens] 60 5e-09
gi|239752604 PREDICTED: similar to immunoglobulin lambda-like po... 55 1e-07
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s... 51 2e-06
gi|4557751 MHC class I polypeptide-related sequence A [Homo sapi... 51 2e-06
gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens] 51 2e-06
gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens] 51 2e-06
gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens] 51 2e-06
gi|4758822 nephrin precursor [Homo sapiens] 50 5e-06
gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precur... 50 5e-06
gi|145309328 papilin [Homo sapiens] 50 5e-06
>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
[Homo sapiens]
Length = 398
Score = 804 bits (2077), Expect = 0.0
Identities = 398/398 (100%), Positives = 398/398 (100%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC
Sbjct: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
Query: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDIT 180
VKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDIT
Sbjct: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDIT 180
Query: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLR 240
LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLR
Sbjct: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLR 240
Query: 241 GTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETAST 300
GTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETAST
Sbjct: 241 GTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETAST 300
Query: 301 LIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDIT 360
LIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDIT
Sbjct: 301 LIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDIT 360
Query: 361 HEAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 398
HEAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA
Sbjct: 361 HEAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 398
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 712 bits (1838), Expect = 0.0
Identities = 348/398 (87%), Positives = 367/398 (92%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPHLPSPFLLMTLLLGRLTGVAGE+ELQVIQP+KS+SVAAGESATL C +TSLI
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGPI WFRGAG GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI ISNITPADAGTYYC
Sbjct: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
Query: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDIT 180
VKFRKGSPD VEFKSGAGTELSVRAKPSAPVVSGPA RATP+HTVSFTCESHGFSPRDIT
Sbjct: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDIT 180
Query: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLR 240
LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTA+VVLTR DVHSQVICE+AH+TLQGDPLR
Sbjct: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR 240
Query: 241 GTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETAST 300
GTANLSE IRVPPTLEVTQQP+RAENQ NVTCQV FYP+ LQLTWLENGNVSRTETAST
Sbjct: 241 GTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETAST 300
Query: 301 LIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDIT 360
L ENKDGTYNWMSWLLVN AHRDDV LTCQVEHDGQ AVSKS+ L++SAH KE GS+
Sbjct: 301 LTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTA 360
Query: 361 HEAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 398
ALA APLL+A LLGPK+LLVVGVS IY+ WKQKA
Sbjct: 361 PGPALASAAPLLIAFLLGPKVLLVVGVSVIYVYWKQKA 398
>gi|18426911 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 609 bits (1570), Expect = e-174
Identities = 298/368 (80%), Positives = 327/368 (88%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
+GVAGE+ELQVIQP+KSV VAAGE+ATLRC TSLIPVGPI WFRGAG GRELIYNQKEG
Sbjct: 26 SGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEG 85
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
HFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR
Sbjct: 86 HFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Query: 145 AKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSV 204
AKPSAPVVSGPA RATP+HTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDP G+SV
Sbjct: 146 AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESV 205
Query: 205 SYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRA 264
SYSIHSTA+VVLTR DVHSQVICE+AH+TLQGDPLRGTANLSE IRVPPTLEVTQQP+RA
Sbjct: 206 SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA 265
Query: 265 ENQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLIENKDGTYNWMSWLLVNTCAHRD 324
ENQ NVTCQV FYP+ LQLTWLENGNVSRTETAST+ ENKDGTYNWMSWLLVN AHRD
Sbjct: 266 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRD 325
Query: 325 DVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDITHEAALAPTAPLLVALLLGPKLLLV 384
DV LTCQVEHDGQ AVSKS+ L++SAH KE GS+ E + + + + + LL+
Sbjct: 326 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAAENTGSNERNIYIVVGVVCTLLVA 385
Query: 385 VGVSAIYI 392
+ ++A+Y+
Sbjct: 386 LLMAALYL 393
>gi|91105767 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 609 bits (1570), Expect = e-174
Identities = 298/368 (80%), Positives = 327/368 (88%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
+GVAGE+ELQVIQP+KSV VAAGE+ATLRC TSLIPVGPI WFRGAG GRELIYNQKEG
Sbjct: 26 SGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEG 85
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
HFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR
Sbjct: 86 HFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Query: 145 AKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSV 204
AKPSAPVVSGPA RATP+HTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDP G+SV
Sbjct: 146 AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESV 205
Query: 205 SYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRA 264
SYSIHSTA+VVLTR DVHSQVICE+AH+TLQGDPLRGTANLSE IRVPPTLEVTQQP+RA
Sbjct: 206 SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA 265
Query: 265 ENQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLIENKDGTYNWMSWLLVNTCAHRD 324
ENQ NVTCQV FYP+ LQLTWLENGNVSRTETAST+ ENKDGTYNWMSWLLVN AHRD
Sbjct: 266 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRD 325
Query: 325 DVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDITHEAALAPTAPLLVALLLGPKLLLV 384
DV LTCQVEHDGQ AVSKS+ L++SAH KE GS+ E + + + + + LL+
Sbjct: 326 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAAENTGSNERNIYIVVGVVCTLLVA 385
Query: 385 VGVSAIYI 392
+ ++A+Y+
Sbjct: 386 LLMAALYL 393
>gi|91105764 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 609 bits (1570), Expect = e-174
Identities = 298/368 (80%), Positives = 327/368 (88%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
+GVAGE+ELQVIQP+KSV VAAGE+ATLRC TSLIPVGPI WFRGAG GRELIYNQKEG
Sbjct: 26 SGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRGAGPGRELIYNQKEG 85
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
HFPRVTTVS+LTKRNN+DFSI I NITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR
Sbjct: 86 HFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 145
Query: 145 AKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSV 204
AKPSAPVVSGPA RATP+HTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDP G+SV
Sbjct: 146 AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESV 205
Query: 205 SYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRA 264
SYSIHSTA+VVLTR DVHSQVICE+AH+TLQGDPLRGTANLSE IRVPPTLEVTQQP+RA
Sbjct: 206 SYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRA 265
Query: 265 ENQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLIENKDGTYNWMSWLLVNTCAHRD 324
ENQ NVTCQV FYP+ LQLTWLENGNVSRTETAST+ ENKDGTYNWMSWLLVN AHRD
Sbjct: 266 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRD 325
Query: 325 DVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDITHEAALAPTAPLLVALLLGPKLLLV 384
DV LTCQVEHDGQ AVSKS+ L++SAH KE GS+ E + + + + + LL+
Sbjct: 326 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAAENTGSNERNIYIVVGVVCTLLVA 385
Query: 385 VGVSAIYI 392
+ ++A+Y+
Sbjct: 386 LLMAALYL 393
>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
[Homo sapiens]
Length = 387
Score = 608 bits (1567), Expect = e-174
Identities = 300/397 (75%), Positives = 331/397 (83%), Gaps = 11/397 (2%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPH P PFLL+TLLLG LT VAGE+ELQ+IQPEK + V G++ATL C +TSL+
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGP++WFRG G GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYC
Sbjct: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
Query: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDIT 180
VKFRKGSP++VEFKSG GTE+++ AKPSAPVV GPA R TPEHTVSFTCESHGFSPRDIT
Sbjct: 120 VKFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDIT 179
Query: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLR 240
LKWFKNGNELSDFQTNVDP G SV+YSI STARVVL DV SQVICE+AH+TLQGDPLR
Sbjct: 180 LKWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLR 239
Query: 241 GTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETAST 300
GTANLSEAIRVPPTLEVTQQPMR NQ NVTCQV FYP+ LQLTW ENGNV + ETAST
Sbjct: 240 GTANLSEAIRVPPTLEVTQQPMRVGNQVNVTCQVRKFYPQSLQLTWSENGNVCQRETAST 299
Query: 301 LIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDIT 360
L ENKDGTYNW SW LVN RDDVVLTCQV+HDGQ AVSK ALE++ HQK+ SD T
Sbjct: 300 LTENKDGTYNWTSWFLVNISDQRDDVVLTCQVKHDGQLAVSKRLALEVTVHQKDQSSDAT 359
Query: 361 HEAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQK 397
A + TA LL+A+LLGP IY+ WKQK
Sbjct: 360 PGPASSLTALLLIAVLLGP----------IYVPWKQK 386
>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
[Homo sapiens]
Length = 276
Score = 422 bits (1085), Expect = e-118
Identities = 204/252 (80%), Positives = 225/252 (89%), Gaps = 1/252 (0%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPH P PFLL+TLLLG LT VAGE+ELQ+IQPEK + V G++ATL C +TSL+
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGP++WFRG G GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYC
Sbjct: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
Query: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDIT 180
VKFRKGSP++VEFKSG GTE+++ AKPSAPVV GPA R TPEHTVSFTCESHGFSPRDIT
Sbjct: 120 VKFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDIT 179
Query: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLR 240
LKWFKNGNELSDFQTNVDP G SV+YSI STARVVL DV SQVICE+AH+TLQGDPLR
Sbjct: 180 LKWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLR 239
Query: 241 GTANLSEAIRVP 252
GTANLSEAIR P
Sbjct: 240 GTANLSEAIRGP 251
Score = 40.0 bits (92), Expect = 0.004
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 32/140 (22%)
Query: 265 ENQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLIENKDGTYNWMSWLLVNTCA--- 321
E+ + TC+ F PR + L W +NGN S N D T +++ + +T
Sbjct: 161 EHTVSFTCESHGFSPRDITLKWFKNGN-----ELSDFQTNVDPTGQSVAYSIRSTARVVL 215
Query: 322 ----HRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDITHEAALAPTAPLLVALLL 377
R V+ C+V H Q +S + S + TA LL+A+LL
Sbjct: 216 DPWDVRSQVI--CEVAHVTLQGDPLRGTANLSEAIRGPASSL--------TALLLIAVLL 265
Query: 378 GPKLLLVVGVSAIYICWKQK 397
GP IY+ WKQK
Sbjct: 266 GP----------IYVPWKQK 275
>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
[Homo sapiens]
Length = 181
Score = 294 bits (752), Expect = 1e-79
Identities = 146/150 (97%), Positives = 146/150 (97%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC
Sbjct: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
Query: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAP 150
VKFRKGSPDDVEFKSGAGTELSVR AP
Sbjct: 121 VKFRKGSPDDVEFKSGAGTELSVREAALAP 150
Score = 76.3 bits (186), Expect = 5e-14
Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 18/175 (10%)
Query: 232 ITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGN 291
+TL L G A E + P V+ + A A + C +++ P G + W
Sbjct: 17 MTLLLGRLTGVAGEDELQVIQPEKSVS---VAAGESATLRCAMTSLIPVG-PIMWFRGAG 72
Query: 292 VSRTETASTLIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAH 351
R + K+G + ++ V+ R+++ + + + Y ++
Sbjct: 73 AGR----ELIYNQKEGHFPRVT--TVSELTKRNNLDFSISISNITPADAGTYYCVKFRKG 126
Query: 352 QKEH-------GSDIT-HEAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 398
+ G++++ EAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA
Sbjct: 127 SPDDVEFKSGAGTELSVREAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQKA 181
>gi|239751927 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 136
Score = 244 bits (622), Expect = 1e-64
Identities = 121/123 (98%), Positives = 122/123 (99%)
Query: 26 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 85
GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH
Sbjct: 9 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
Query: 86 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 145
FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA
Sbjct: 69 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 128
Query: 146 KPS 148
P+
Sbjct: 129 DPA 131
>gi|169217521 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 160
Score = 240 bits (613), Expect = 1e-63
Identities = 120/123 (97%), Positives = 121/123 (98%)
Query: 26 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 85
GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH
Sbjct: 9 GVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGH 68
Query: 86 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRA 145
FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR
Sbjct: 69 FPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRG 128
Query: 146 KPS 148
+ S
Sbjct: 129 EYS 131
>gi|94538337 signal-regulatory protein gamma isoform 2 precursor
[Homo sapiens]
Length = 170
Score = 234 bits (597), Expect = 1e-61
Identities = 111/149 (74%), Positives = 130/149 (87%), Gaps = 1/149 (0%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MPVPASWPH P PFLL+TLLLG LT VAGE+ELQ+IQPEK + V G++ATL C +TSL+
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
PVGP++WFRG G GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYC
Sbjct: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
Query: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSA 149
VKFRKGSP++VEFKSG GTE+++ S+
Sbjct: 120 VKFRKGSPENVEFKSGPGTEMALGGPASS 148
>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
Length = 651
Score = 154 bits (388), Expect = 2e-37
Identities = 78/118 (66%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
Query: 27 VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 86
VAGE ELQVIQPE VSVAAGE ATL C +TSL+PVGPI WFRGA G++LIY+ K H
Sbjct: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
Query: 87 PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
PRVTT+S+ KRN+ D+SI IS+IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626
Score = 115 bits (288), Expect = 7e-26
Identities = 61/119 (51%), Positives = 75/119 (63%), Gaps = 27/119 (22%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
TG AGE+ELQVIQPEK WF+G G+ELIY+ K G
Sbjct: 416 TGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 143
HFP++ +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSV 507
Score = 97.4 bits (241), Expect = 2e-20
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 152 VSGPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHST 211
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V +G +Y++ S+
Sbjct: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGH--TYNVTSS 245
Query: 212 ARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPPTL---------------E 256
V L DV S V+C + H + T L + +R P T+
Sbjct: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLREPMTVVWRAPYPALFSTGTTP 303
Query: 257 VTQ---------QPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLIENKDG 307
VT+ Q + VTC V FYP+ + L WLE+ + + TL +N D
Sbjct: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
Query: 308 TYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAH 351
+Y LLVN + VLTC +EH+GQ + L +AH
Sbjct: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAH 407
Score = 60.1 bits (144), Expect = 3e-09
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 152 VSGPAVRATPEHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPAGDSVSYS 207
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
Query: 208 IHSTARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPP---TLEVTQQPMRA 264
I S A V LTR DV S++ CE+ H L +PL+ T NLS+A R P +LE T Q
Sbjct: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
Query: 265 ENQANVTCQV 274
+ C V
Sbjct: 147 LEEREFACWV 156
Score = 31.2 bits (69), Expect = 1.7
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 375 LLLGPKLLLVVGVSAIYICWKQKA 398
LLLG K+LL+V VSA Y+ KQKA
Sbjct: 628 LLLGSKVLLLVDVSAAYVHRKQKA 651
>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
sapiens]
Length = 651
Score = 154 bits (388), Expect = 2e-37
Identities = 78/118 (66%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
Query: 27 VAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHF 86
VAGE ELQVIQPE VSVAAGE ATL C +TSL+PVGPI WFRGA G++LIY+ K H
Sbjct: 510 VAGE-ELQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSPKRCHS 568
Query: 87 PRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
PRVTT+S+ KRN+ D+SI IS+IT DAGTYYC+K R+ P +VE KSG GT++SVR
Sbjct: 569 PRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQMSVR 626
Score = 115 bits (288), Expect = 7e-26
Identities = 61/119 (51%), Positives = 75/119 (63%), Gaps = 27/119 (22%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
TG AGE+ELQVIQPEK WF+G G+ELIY+ K G
Sbjct: 416 TGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSV 143
HFP++ +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSV 507
Score = 97.4 bits (241), Expect = 2e-20
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 152 VSGPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHST 211
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V +G +Y++ S+
Sbjct: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGH--TYNVTSS 245
Query: 212 ARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPPTL---------------E 256
V L DV S V+C + H + T L + +R P T+
Sbjct: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLREPMTVVWRAPYPALFSTGTTP 303
Query: 257 VTQ---------QPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLIENKDG 307
VT+ Q + VTC V FYP+ + L WLE+ + + TL +N D
Sbjct: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
Query: 308 TYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAH 351
+Y LLVN + VLTC +EH+GQ + L +AH
Sbjct: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAH 407
Score = 60.1 bits (144), Expect = 3e-09
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 152 VSGPAVRATPEHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPAGDSVSYS 207
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
Query: 208 IHSTARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPP---TLEVTQQPMRA 264
I S A V LTR DV S++ CE+ H L +PL+ T NLS+A R P +LE T Q
Sbjct: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
Query: 265 ENQANVTCQV 274
+ C V
Sbjct: 147 LEEREFACWV 156
Score = 31.2 bits (69), Expect = 1.7
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 375 LLLGPKLLLVVGVSAIYICWKQKA 398
LLLG K+LL+V VSA Y+ KQKA
Sbjct: 628 LLLGSKVLLLVDVSAAYVHRKQKA 651
>gi|30425382 signal-regulatory protein delta [Homo sapiens]
Length = 197
Score = 135 bits (340), Expect = 6e-32
Identities = 80/172 (46%), Positives = 105/172 (61%), Gaps = 5/172 (2%)
Query: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
MP+PAS H P P LL+ LLL L GV +Q Q E S +V+ GES L C++ +
Sbjct: 1 MPIPASPLHPPLPSLLLYLLL-ELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTL 57
Query: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
P GP++WF+G G R+LIYN K+G+FPRV + + TK N DFS I I+ ADAGTYYC
Sbjct: 58 PNGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYC 117
Query: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRA-TPEHTVSFTCES 171
VKF KG E++SG GT++ V + P + PA RA + H + TC S
Sbjct: 118 VKFIKGRAIK-EYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLS 168
>gi|239751925 PREDICTED: similar to signal-regulatory protein alpha
[Homo sapiens]
Length = 87
Score = 127 bits (319), Expect = 2e-29
Identities = 63/87 (72%), Positives = 70/87 (80%)
Query: 312 MSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDITHEAALAPTAPL 371
MSWLLVN AHRDDV LTCQVEHDGQ AVSKS+ L++SAH KE GS+ ALA APL
Sbjct: 1 MSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAPGPALASAAPL 60
Query: 372 LVALLLGPKLLLVVGVSAIYICWKQKA 398
L+A LLGPK+LLVVGVS IY+ WKQKA
Sbjct: 61 LIAFLLGPKVLLVVGVSVIYVYWKQKA 87
>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
sapiens]
Length = 532
Score = 116 bits (291), Expect = 3e-26
Identities = 62/131 (47%), Positives = 81/131 (61%), Gaps = 27/131 (20%)
Query: 25 TGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEG 84
TG AGE+EL+VIQPEK WF+G G+ELIY+ K G
Sbjct: 416 TGAAGEEELRVIQPEK--------------------------WFKGTETGQELIYSSKGG 449
Query: 85 HFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVR 144
HFP++ +S++TKRNN DFS+ I++IT A+ GTY CVKF KG P D+E KSG GTELSV
Sbjct: 450 HFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGP-DMELKSGPGTELSVH 508
Query: 145 AKPSAPVVSGP 155
++ S ++ P
Sbjct: 509 SEYSVGLLRPP 519
Score = 95.9 bits (237), Expect = 6e-20
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 152 VSGPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHST 211
+ GP R+ P + T S GFS +T+ W KN +EL + QT+V +G + Y++ S+
Sbjct: 188 LQGPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHT--YNVTSS 245
Query: 212 ARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPPTL---------------E 256
V L DV S V+C + H + T L + ++ P T+
Sbjct: 246 VLVPLMDDDVFSHVVCHVEHKLTWF--FQKTTGLDQYLQEPMTVVWRAPYPALFSTGTTP 303
Query: 257 VTQ---------QPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLIENKDG 307
VT+ Q + VTC V FYP+ + L WLE+ + + TL +N D
Sbjct: 304 VTRASTPGVFHSQVLLFSCLVAVTCLVQRFYPQNVHLAWLEDCHTLKGTEQPTLKKNNDR 363
Query: 308 TYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEISAH 351
+Y LLVN + VLTC +EH+GQ + L +AH
Sbjct: 364 SYTLEKLLLVNASVQGPERVLTCMMEHEGQPPKRANLVLSTAAH 407
Score = 60.1 bits (144), Expect = 3e-09
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 152 VSGPAVRATPEHTVSFTCESHGFSP----RDITLKWFKNGNELSDFQTNVDPAGDSVSYS 207
++GP+ R +P +V F C + F+ RD + W K+ +E + P +
Sbjct: 29 LTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASAQRLVPDNGGNDF- 87
Query: 208 IHSTARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPP---TLEVTQQPMRA 264
I S A V LTR DV S++ CE+ H L +PL+ T NLS+A R P +LE T Q
Sbjct: 88 ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNPDGTYSLEHTWQAEAT 146
Query: 265 ENQANVTCQV 274
+ C V
Sbjct: 147 LEEREFACWV 156
>gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
sapiens]
Length = 244
Score = 98.2 bits (243), Expect = 1e-20
Identities = 67/189 (35%), Positives = 93/189 (49%), Gaps = 34/189 (17%)
Query: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEDELQVIQPEKSVSVA------------- 45
M P HLP FLL+ L+L +G + ++ QV+QPE + VA
Sbjct: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWII 64
Query: 46 ---------AGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELT 96
G++ L C + P GPI WF+GAG RE IYN P+ T V
Sbjct: 65 QPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV---- 120
Query: 97 KRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS----APVV 152
+ +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+AK + A
Sbjct: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTSSKEAEFT 178
Query: 153 SGPAVRATP 161
S PA +P
Sbjct: 179 SEPATEMSP 187
>gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
sapiens]
Length = 342
Score = 94.4 bits (233), Expect = 2e-19
Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 10/136 (7%)
Query: 30 EDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRV 89
E +L +IQP++ V G++ L C + P GPI WF+GAG RE IYN P+
Sbjct: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
Query: 90 TTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS- 148
T V + +N DFSI + N++ DAGTYYCVKF++ + ++ SG GT L V+AK +
Sbjct: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 269
Query: 149 ---APVVSGPAVRATP 161
A S PA +P
Sbjct: 270 SKEAEFTSEPATEMSP 285
Score = 92.4 bits (228), Expect = 6e-19
Identities = 65/193 (33%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 1 MPVPASWPHLPSPFLLMTLLL--GRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTS 58
M P HLP FLL+ L+L +G + ++ QV+QPE + VA GE+ LRC +
Sbjct: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
Query: 59 LIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRN-NLDFSISISNITPADAGT 117
G I W + + ++ IYN K G FP V + + T N D+SI I N+T GT
Sbjct: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
Query: 118 YYCVKFRKGSPDDVEFKSGAGTELSVRA----KPSAPVVS-GPAVRATPEHTVSFTCESH 172
Y+CV+F G + E KS GT + V+ +P ++ V T TV C
Sbjct: 125 YHCVRF-DGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLGTTGDTVFLNCTVL 183
Query: 173 GFSPRDITLKWFK 185
G P ++WF+
Sbjct: 184 GDGPPG-PIRWFQ 195
>gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens]
Length = 398
Score = 62.8 bits (151), Expect = 5e-10
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 9/191 (4%)
Query: 102 DFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATP 161
+ SISISN+ AD G Y C F V T L + P P+++G
Sbjct: 92 ELSISISNVALADEGEYTCSIFTM----PVRTAKSLVTVLGI---PQKPIITGYKSSLRE 144
Query: 162 EHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDV 221
+ T + C+S G P L W K EL T + + ++++ S+ +TR D
Sbjct: 145 KDTATLNCQSSGSKPA-ARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDD 203
Query: 222 HSQVICEIAHITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRG 281
+ ++C + H +L+G R T+ E + P + P E Q + P
Sbjct: 204 GASIVCSVNHESLKGAD-RSTSQRIEVLYTPTAMIRPDPPHPREGQKLLLHCEGRGNPVP 262
Query: 282 LQLTWLENGNV 292
Q W + G+V
Sbjct: 263 QQYLWEKEGSV 273
Score = 31.6 bits (70), Expect = 1.3
Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Query: 238 PLRGTANLSEAIRVP--PTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRT 295
P+R +L + +P P + + +R ++ A + CQ S P +LTW +
Sbjct: 116 PVRTAKSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAA-RLTWRKGDQELHG 174
Query: 296 ETASTLIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEI 348
E + T+ S + D + C V H+ + +S + I
Sbjct: 175 EPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHESLKGADRSTSQRI 227
>gi|11056046 cell adhesion molecule 3 isoform 1 [Homo sapiens]
Length = 432
Score = 62.8 bits (151), Expect = 5e-10
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 9/191 (4%)
Query: 102 DFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATP 161
+ SISISN+ AD G Y C F V T L + P P+++G
Sbjct: 126 ELSISISNVALADEGEYTCSIFTM----PVRTAKSLVTVLGI---PQKPIITGYKSSLRE 178
Query: 162 EHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDV 221
+ T + C+S G P L W K EL T + + ++++ S+ +TR D
Sbjct: 179 KDTATLNCQSSGSKPA-ARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDD 237
Query: 222 HSQVICEIAHITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRG 281
+ ++C + H +L+G R T+ E + P + P E Q + P
Sbjct: 238 GASIVCSVNHESLKGAD-RSTSQRIEVLYTPTAMIRPDPPHPREGQKLLLHCEGRGNPVP 296
Query: 282 LQLTWLENGNV 292
Q W + G+V
Sbjct: 297 QQYLWEKEGSV 307
Score = 31.6 bits (70), Expect = 1.3
Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
Query: 238 PLRGTANLSEAIRVP--PTLEVTQQPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRT 295
P+R +L + +P P + + +R ++ A + CQ S P +LTW +
Sbjct: 150 PVRTAKSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAA-RLTWRKGDQELHG 208
Query: 296 ETASTLIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSKSYALEI 348
E + T+ S + D + C V H+ + +S + I
Sbjct: 209 EPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHESLKGADRSTSQRI 261
>gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens]
Length = 437
Score = 59.7 bits (143), Expect = 5e-09
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 9/197 (4%)
Query: 94 ELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVS 153
EL + + + SIS+S+++ +D G Y C F + L+V P P +S
Sbjct: 80 ELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAY-------LTVLGVPEKPQIS 132
Query: 154 GPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAR 213
G + + TC++ G P ++WFKN E+ D + + + ++++ ST
Sbjct: 133 GFSSPVMEGDLMQLTCKTSGSKPA-ADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLD 191
Query: 214 VVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRAENQANVTCQ 273
+ R D VIC + H +L P + + E P + P E Q +
Sbjct: 192 FRVDRSDDGVAVICRVDHESLNATP-QVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTC 250
Query: 274 VSNFYPRGLQLTWLENG 290
S P + W ++G
Sbjct: 251 ESKGKPLPEPVLWTKDG 267
Score = 31.6 bits (70), Expect = 1.3
Identities = 39/153 (25%), Positives = 58/153 (37%), Gaps = 16/153 (10%)
Query: 41 SVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNN 100
S V G+ L C + P I WF+ +++ Y ++E + TVS +
Sbjct: 135 SSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVS-----ST 189
Query: 101 LDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRAT 160
LDF + S+ D C R A L + PS ++ P+
Sbjct: 190 LDFRVDRSD----DGVAVIC---RVDHESLNATPQVAMQVLEIHYTPSVKII--PSTPFP 240
Query: 161 PE-HTVSFTCESHGFSPRDITLKWFKNGNELSD 192
E + TCES G P + W K+G EL D
Sbjct: 241 QEGQPLILTCESKG-KPLPEPVLWTKDGGELPD 272
>gi|239752604 PREDICTED: similar to immunoglobulin lambda-like
polypeptide 1 [Homo sapiens]
Length = 490
Score = 55.1 bits (131), Expect = 1e-07
Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 33/253 (13%)
Query: 106 SISNITPADAGT--YYCVKFRKGSPDDVEFKSGAGTELSVRAKPS-APVVSGPAVRATP- 161
S+ +T ++ GT Y C K P + + + V P AP V+GP+V P
Sbjct: 231 SVVTVTSSNFGTQTYTCNVDHK--PSNTKVDKTVERKCCVECPPCPAPPVAGPSVFLFPP 288
Query: 162 --------EHTVSFTCESHGFSPRD--ITLKWFKNGNELSDFQTNVDPAGDSVSYSIHST 211
T TC S D + W+ +G E+ + +T P + +ST
Sbjct: 289 KPKDTLMISRTPEVTCVVVDVSHEDPEVQFNWYVDGMEVHNAKTK--PREEQ----FNST 342
Query: 212 ARVVLTRGDVHSQVI------CEIAHITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRAE 265
RVV VH + C++++ L P+ T + ++ P + T P R E
Sbjct: 343 FRVVSVLTVVHQDWLNGKEYKCKVSNKGLPA-PIEKTISKTKGQPREPQV-YTLPPSREE 400
Query: 266 ---NQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLIENKDGTYNWMSWLLVNTCAH 322
NQ ++TC V FYP + + W NG + + + DG++ S L V+
Sbjct: 401 MTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPMLDSDGSFFLYSKLTVDKSRW 460
Query: 323 RDDVVLTCQVEHD 335
+ V +C V H+
Sbjct: 461 QQGNVFSCSVMHE 473
Score = 44.3 bits (103), Expect = 2e-04
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 7/131 (5%)
Query: 118 YYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSG--PAVRATPEHTVSFTCESHGFS 175
Y C KG P +E T + +P P V P+ ++ VS TC GF
Sbjct: 362 YKCKVSNKGLPAPIE-----KTISKTKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFY 416
Query: 176 PRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQ 235
P DI ++W NG ++++T S+ ++S V +R + C + H L
Sbjct: 417 PSDIAVEWESNGQPENNYKTTPPMLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 476
Query: 236 GDPLRGTANLS 246
+ + +LS
Sbjct: 477 NHYTQKSLSLS 487
Score = 30.8 bits (68), Expect = 2.2
Identities = 20/95 (21%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 241 GTANLSEAIRVPPTLEVTQ-QPMRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETAS 299
GT +L+ + + P + +E+ A + C V +++P + ++W S T
Sbjct: 159 GTTSLAASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP 218
Query: 300 TLIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEH 334
++++ G Y+ +S ++ T ++ TC V+H
Sbjct: 219 AVLQS-SGLYS-LSSVVTVTSSNFGTQTYTCNVDH 251
Score = 28.9 bits (63), Expect = 8.5
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 134 KSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNELSDF 193
+S T L+ K + P R+T E T + C + P +T+ W +G S
Sbjct: 156 RSHGTTSLAASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSW-NSGALTSGV 214
Query: 194 QTNVDPAGDSVSYSIHSTARVVLTRGDVHSQV-ICEIAH 231
T S YS+ S V +T + +Q C + H
Sbjct: 215 HTFPAVLQSSGLYSLSSV--VTVTSSNFGTQTYTCNVDH 251
>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
sapiens]
Length = 387
Score = 51.2 bits (121), Expect = 2e-06
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 14 FLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGP---IMW--F 68
FL+++ L G+++ V QV P+ V+V G + TL C T+ + I W F
Sbjct: 9 FLILSCLAGQVSVV------QVTIPDGFVNVTVGSNVTLICIYTTTVASREQLSIQWSFF 62
Query: 69 RGAGAGRELIYNQKEGHFPRVTTVSELTKRNNL--DFSISISNITPADAGTYYCVKFRKG 126
IY + G + + +N + SI+IS++ PAD+G Y C
Sbjct: 63 HKKEMEPISIYFSQGGQAVAIGQFKDRITGSNDPGNASITISHMQPADSGIYIC---DVN 119
Query: 127 SPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPE--HTVSFTCESHGFSPRDITLKWF 184
+P D ++ +SV KPS P+ S V+ PE HT+S +C S +P + W
Sbjct: 120 NPPDFLGQNQGILNVSVLVKPSKPLCS---VQGRPETGHTISLSCLSALGTPSPV-YYWH 175
Query: 185 K-NGNELSDFQTNVDP 199
K G ++ + N +P
Sbjct: 176 KLEGRDIVPVKENFNP 191
>gi|4557751 MHC class I polypeptide-related sequence A [Homo
sapiens]
Length = 383
Score = 50.8 bits (120), Expect = 2e-06
Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 18/158 (11%)
Query: 221 VHSQVICEIAHITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPR 280
+H+ + E+ G LR T VPP + VT+ +E VTC+ S FYP
Sbjct: 183 MHADCLQELRRYLKSGVVLRRT--------VPPMVNVTRSEA-SEGNITVTCRASGFYPW 233
Query: 281 GLQLTWLENGNVSRTETASTLIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQA- 339
+ L+W ++G +T DG + +W+ C ++ TC +EH G +
Sbjct: 234 NITLSWRQDGVSLSHDTQQWGDVLPDGNGTYQTWVATRIC-QGEEQRFTCYMEHSGNHST 292
Query: 340 --VSKSYALEISAHQKEHGSDITHEAALAPTAPLLVAL 375
V L + +H + H +A+A A ++ +
Sbjct: 293 HPVPSGKVLVLQSHWQTF-----HVSAVAAAAIFVIII 325
Score = 31.2 bits (69), Expect = 1.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 162 EHTVSFTCESHGFSPRDITLKWFKNGNELS 191
E ++ TC + GF P +ITL W ++G LS
Sbjct: 218 EGNITVTCRASGFYPWNITLSWRQDGVSLS 247
>gi|229577039 butyrophilin-like 8 isoform 4 precursor [Homo sapiens]
Length = 340
Score = 50.8 bits (120), Expect = 2e-06
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 22/197 (11%)
Query: 15 LLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMT--SLIPVGPIMWFRGAG 72
L+++L+L L G + QV P+K V GE A C ++ + + +FRG
Sbjct: 3 LMLSLVLSLLK--LGSGQWQVFGPDKPVQALVGEDAAFSCFLSPKTNAEAMEVRFFRGQF 60
Query: 73 AGRELIY----NQKEGHFPRVTTVSELTKRNNLD--FSISISNITPADAGTYYCVKFRKG 126
+ +Y +Q P+ ++L K + + S+ + NIT DAG Y C
Sbjct: 61 SSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGC------ 114
Query: 127 SPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDITLKW-FK 185
+ A EL V A S P++S + + + C+S G+ PR T KW
Sbjct: 115 RISSQSYYQKAIWELQVSALGSVPLIS---ITGYVDRDIQLLCQSSGWFPRP-TAKWKGP 170
Query: 186 NGNELS-DFQTNVDPAG 201
G +LS D +TN D G
Sbjct: 171 QGQDLSTDSRTNRDMHG 187
>gi|94957742 butyrophilin-like 8 isoform 2 precursor [Homo sapiens]
Length = 500
Score = 50.8 bits (120), Expect = 2e-06
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 22/197 (11%)
Query: 15 LLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMT--SLIPVGPIMWFRGAG 72
L+++L+L L G + QV P+K V GE A C ++ + + +FRG
Sbjct: 3 LMLSLVLSLLK--LGSGQWQVFGPDKPVQALVGEDAAFSCFLSPKTNAEAMEVRFFRGQF 60
Query: 73 AGRELIY----NQKEGHFPRVTTVSELTKRNNLD--FSISISNITPADAGTYYCVKFRKG 126
+ +Y +Q P+ ++L K + + S+ + NIT DAG Y C
Sbjct: 61 SSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGC------ 114
Query: 127 SPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDITLKW-FK 185
+ A EL V A S P++S + + + C+S G+ PR T KW
Sbjct: 115 RISSQSYYQKAIWELQVSALGSVPLIS---ITGYVDRDIQLLCQSSGWFPRP-TAKWKGP 170
Query: 186 NGNELS-DFQTNVDPAG 201
G +LS D +TN D G
Sbjct: 171 QGQDLSTDSRTNRDMHG 187
>gi|13376271 butyrophilin-like 8 isoform 1 precursor [Homo sapiens]
Length = 347
Score = 50.8 bits (120), Expect = 2e-06
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 22/197 (11%)
Query: 15 LLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMT--SLIPVGPIMWFRGAG 72
L+++L+L L G + QV P+K V GE A C ++ + + +FRG
Sbjct: 3 LMLSLVLSLLK--LGSGQWQVFGPDKPVQALVGEDAAFSCFLSPKTNAEAMEVRFFRGQF 60
Query: 73 AGRELIY----NQKEGHFPRVTTVSELTKRNNLD--FSISISNITPADAGTYYCVKFRKG 126
+ +Y +Q P+ ++L K + + S+ + NIT DAG Y C
Sbjct: 61 SSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGC------ 114
Query: 127 SPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDITLKW-FK 185
+ A EL V A S P++S + + + C+S G+ PR T KW
Sbjct: 115 RISSQSYYQKAIWELQVSALGSVPLIS---ITGYVDRDIQLLCQSSGWFPRP-TAKWKGP 170
Query: 186 NGNELS-DFQTNVDPAG 201
G +LS D +TN D G
Sbjct: 171 QGQDLSTDSRTNRDMHG 187
>gi|4758822 nephrin precursor [Homo sapiens]
Length = 1241
Score = 49.7 bits (117), Expect = 5e-06
Identities = 85/372 (22%), Positives = 144/372 (38%), Gaps = 54/372 (14%)
Query: 19 LLLGRLTGVAGEDELQVIQPE------KSVSVAAGESATLRCAMTSLIPVGPIMWFRGAG 72
LLLG LT + + P ++++V G S LRC +++ P + W A
Sbjct: 12 LLLGLLTEGLAQLAIPASVPRGFWALPENLTVVEGASVELRCGVST--PGSAVQW---AK 66
Query: 73 AGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVE 132
G L + + FPR + + +F + I +D Y C R ++
Sbjct: 67 DGLLLGPDPRIPGFPRYRLEGDPARG---EFHLHIEACDLSDDAEYECQVGRSEMGPELV 123
Query: 133 FKSGAGTELSVRAKPSAPVVS---GPAVRATPEHTVSFTCESHGFSPR-DITLKWFKNGN 188
LS+ P +++ G V C S P DIT+ +G
Sbjct: 124 ---SPRVILSILVPPKLLLLTPEAGTMVTWVAGQEYVVNCVSGDAKPAPDITI--LLSGQ 178
Query: 189 ELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLRGTANLSEA 248
+SD NV+ +++ +TARV D ++CE + L+ P++ A+ +
Sbjct: 179 TISDISANVNEGSQQKLFTVEATARVTPRSSDNRQLLVCEASSPALEA-PIK--ASFTVN 235
Query: 249 IRVPPTLEVTQQP------MRAENQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLI 302
+ PP V + P +RA + C P L WL+NG T
Sbjct: 236 VLFPPGPPVIEWPGLDEGHVRAGQSLELPCVARGGNPLA-TLQWLKNGQPVST------- 287
Query: 303 ENKDGTYNWMSWLLVNTCA-HRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDITH 361
+W +T A R +V+T + E G Q +++ +SA +EHG IT
Sbjct: 288 ----------AWGTEHTQAVARSVLVMTVRPEDHGAQLSCEAHN-SVSAGTQEHG--ITL 334
Query: 362 EAALAPTAPLLV 373
+ P+A +++
Sbjct: 335 QVTFPPSAIIIL 346
Score = 30.8 bits (68), Expect = 2.2
Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 20/162 (12%)
Query: 32 ELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRE--LIYNQKEGHFPRV 89
+L + P + + AG L C P +MW++ + E L + H V
Sbjct: 443 KLWIEGPPEGQKLRAGTRVRLVCLAIGGNPEPSLMWYKDSRTVTESRLPQESRRVHLGSV 502
Query: 90 TTVSELTKRNNLDFSISISNIT-PADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS 148
+++ FS + +T P+D + K + S A T+L+V+ P+
Sbjct: 503 -------EKSGSTFSRELVLVTGPSDNQAKFTCKAGQLS---------ASTQLAVQFPPT 546
Query: 149 APVVSGPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNEL 190
+ A P ++ TC S +P + L W K G L
Sbjct: 547 NVTILANASALRPGDALNLTCVSVSSNP-PVNLSWDKEGERL 587
>gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precursor
[Homo sapiens]
Length = 527
Score = 49.7 bits (117), Expect = 5e-06
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 9 HLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMT--SLIPVGPIM 66
H P L+ LLL V+ + V+ P + GE+ TLRC ++ +
Sbjct: 8 HFSRPASLLLLLLSLCALVSAQ--FIVVGPTDPILATVGENTTLRCHLSPEKNAEDMEVR 65
Query: 67 WFRGA--------GAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTY 118
WFR GRE Q E + R T VS+ R ++ ++ I NIT + GTY
Sbjct: 66 WFRSQFSPAVFVYKGGRERTEEQMEEYRGRTTFVSKDISRGSV--ALVIHNITAQENGTY 123
Query: 119 YCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRD 178
C F++G D A L V S P++S +R + + C S G+ P+
Sbjct: 124 RCY-FQEGRSYD-----EAILHLVVAGLGSKPLIS---MRGHEDGGIRLECISRGWYPKP 174
Query: 179 ITL 181
+T+
Sbjct: 175 LTV 177
>gi|145309328 papilin [Homo sapiens]
Length = 1251
Score = 49.7 bits (117), Expect = 5e-06
Identities = 79/341 (23%), Positives = 130/341 (38%), Gaps = 73/341 (21%)
Query: 81 QKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDD-VEFKSGAG- 138
QK+G +S R D S+ I + DAGTY C R G ++ + G
Sbjct: 917 QKDGQ-----PISSDRHRLQFDGSLIIHPLQAEDAGTYSCGSTRPGRDSQKIQLRIIGGD 971
Query: 139 ------TELSVRAKPSAPV-------VSGP-----------------------AVRATPE 162
ELS +P P +GP V A+P
Sbjct: 972 MAVLSEAELSRFPQPRDPAQDFGQAGAAGPLGAIPSSHPQPANRLRLDQNQPRVVDASPG 1031
Query: 163 HTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVH 222
+ TC + GF P ++W ++G +S + + P G V +RV + G +
Sbjct: 1032 QRIRMTCRAEGFPPP--AIEWQRDGQPVSSPRHQLQPDGSLV------ISRVAVEDGGFY 1083
Query: 223 SQVICEIAHITLQGDPLRGTANLSEAIRVPPTLEVTQQPMRAENQANVTCQVSNFYPRGL 282
+ V + LR L+ + +PPT+ V + + A + C V+ +
Sbjct: 1084 TCVAFNGQDRDQRWVQLRVLGELTIS-GLPPTVTVPE-----GDTARLLCVVAG---ESV 1134
Query: 283 QLTWLENGNVSRTETASTLIENKDGTYNWMSWLLVNTCAHRDDVVLTCQVEHDGQQAVSK 342
+ W NG + + + ++ DGT LL+ RD+ TC + G QAVS+
Sbjct: 1135 NIRWSRNGLPVQAD-GHRVHQSPDGT------LLIYNLRARDEGSYTCSA-YQGSQAVSR 1186
Query: 343 SYALEI-----SAHQKEHGSDITHEAALAPTAPLLVALLLG 378
S +++ +A ++ G D + LA +L A L G
Sbjct: 1187 STEVKVVSPAPTAQPRDPGRDCVDQPELANCDLILQAQLCG 1227
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,985,996
Number of Sequences: 37866
Number of extensions: 711780
Number of successful extensions: 2950
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 2240
Number of HSP's gapped (non-prelim): 780
length of query: 398
length of database: 18,247,518
effective HSP length: 104
effective length of query: 294
effective length of database: 14,309,454
effective search space: 4206979476
effective search space used: 4206979476
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.