Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF582 Sequence: fasta or formatted (517aa) NCBI GI: 21389593
Description:

zinc finger protein 582

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         16           1
 C cysteine            4.6         24           1
 D aspartate           2.5         13           2
 E glutamate           9.3         48           2
 F phenylalanine       4.3         22           1
 G glycine             5.8         30           2
 H histidine           6.6         34           2
 I isoleucine          5.0         26           2
 K lysine              8.9         46           2
 L leucine             6.0         31           2
 M methionine          1.7          9           1
 N asparagine          3.3         17           1
 P proline             4.3         22           1
 Q glutamine           6.6         34           2
 R arginine            5.6         29           1
 S serine              7.5         39           2
 T threonine           4.6         24           2
 V valine              4.6         24           2
 W tryptophan          1.2          6           1
 Y tyrosine            4.4         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 582 
ZNF383                0.522   zinc finger protein 383 
ZNF565                0.514   zinc finger protein 565 
ZNF565                0.514   zinc finger protein 565 
ZFP14                 0.491   zinc finger protein 14-like 
ZNF461                0.482   gonadotropin inducible transcription repressor 1 [Ho...
ZNF570                0.475   zinc finger protein 570 
ZNF566                0.471   zinc finger protein 566 isoform 1 
ZNF566                0.471   zinc finger protein 566 isoform 1 
ZNF566                0.471   zinc finger protein 566 isoform 1 
ZNF566                0.466   zinc finger protein 566 isoform 2 
ZNF790                0.465   zinc finger protein 790 
ZNF583                0.464   zinc finger protein 583 
ZNF583                0.464   zinc finger protein 583 
ZNF583                0.464   zinc finger protein 583 
ZNF420                0.461   zinc finger protein 420 
ZNF470                0.458   zinc finger protein 470 
ZNF780A               0.450   zinc finger protein 780A isoform b 
ZNF780A               0.450   zinc finger protein 780A isoform b 
ZFP30                 0.450   zinc finger protein 30 homolog 
ZFP82                 0.449   zinc finger protein 82 homolog 
ZNF780B               0.447   zinc finger protein 780B 
ZNF780A               0.446   zinc finger protein 780A isoform a 
ZNF283                0.443   zinc finger protein 283 
ZNF471                0.437   zinc finger protein 471 
ZNF546                0.437   zinc finger protein 546 
ZNF184                0.430   zinc finger protein 184 
ZNF345                0.430   zinc finger protein 345 
LOC100291520          0.424   PREDICTED: hypothetical protein XP_002347975 isofor...
ZNF140                0.424   zinc finger protein 140 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press