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Search of human proteins with 109637795
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109637795 E2F transcription factor 6 [Homo sapiens]
(281 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109637795 E2F transcription factor 6 [Homo sapiens] 553 e-158
gi|4758226 E2F transcription factor 2 [Homo sapiens] 188 5e-48
gi|4503433 E2F transcription factor 3 [Homo sapiens] 187 1e-47
gi|12669911 E2F transcription factor 1 [Homo sapiens] 160 2e-39
gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens] 125 3e-29
gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens] 125 3e-29
gi|12669915 E2F transcription factor 4 [Homo sapiens] 122 4e-28
gi|145580626 E2F transcription factor 7 [Homo sapiens] 54 1e-07
gi|134142813 E2F transcription factor 5 isoform 3 [Homo sapiens] 49 6e-06
gi|38505226 E2F family member 8 [Homo sapiens] 47 1e-05
gi|6005900 transcription factor Dp-1 [Homo sapiens] 33 0.28
gi|5454112 transcription factor Dp-2 (E2F dimerization partner 2... 32 0.48
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 32 0.62
gi|189409125 transcription factor Dp family, member 3 [Homo sapi... 32 0.62
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 32 0.62
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 32 0.62
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 32 0.62
gi|219842212 protein phosphatase 1, regulatory (inhibitor) subun... 32 0.81
gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit... 32 0.81
gi|17975763 myelin transcription factor 1 [Homo sapiens] 32 0.81
gi|69885084 p120E4F [Homo sapiens] 31 1.4
gi|223278393 protein phosphatase 1, regulatory (inhibitor) subun... 30 1.8
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 30 1.8
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 30 1.8
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 30 1.8
gi|55743140 WW domain binding protein 5 [Homo sapiens] 30 1.8
gi|55743147 WW domain binding protein 5 [Homo sapiens] 30 1.8
gi|10047100 WW domain binding protein 5 [Homo sapiens] 30 1.8
gi|55743145 WW domain binding protein 5 [Homo sapiens] 30 1.8
gi|226497734 RNA binding motif protein 19 [Homo sapiens] 30 2.4
>gi|109637795 E2F transcription factor 6 [Homo sapiens]
Length = 281
Score = 553 bits (1425), Expect = e-158
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MSQQRPARKLPSLLLDPTEETVRRRCRDPINVEGLLPSKIRINLEDNVQYVSMRKALKVK 60
MSQQRPARKLPSLLLDPTEETVRRRCRDPINVEGLLPSKIRINLEDNVQYVSMRKALKVK
Sbjct: 1 MSQQRPARKLPSLLLDPTEETVRRRCRDPINVEGLLPSKIRINLEDNVQYVSMRKALKVK 60
Query: 61 RPRFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLVEKKS 120
RPRFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLVEKKS
Sbjct: 61 RPRFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLVEKKS 120
Query: 121 KNHIRWIGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENERL 180
KNHIRWIGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENERL
Sbjct: 121 KNHIRWIGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENERL 180
Query: 181 AYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPREDSITVHIRSTNGPIDVYLCEVEQ 240
AYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPREDSITVHIRSTNGPIDVYLCEVEQ
Sbjct: 181 AYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPREDSITVHIRSTNGPIDVYLCEVEQ 240
Query: 241 GQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLEVSN 281
GQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLEVSN
Sbjct: 241 GQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLEVSN 281
>gi|4758226 E2F transcription factor 2 [Homo sapiens]
Length = 437
Score = 188 bits (477), Expect = 5e-48
Identities = 96/215 (44%), Positives = 143/215 (66%), Gaps = 1/215 (0%)
Query: 60 KRPRFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLVEKK 119
++ R+D SL LT+KF+ L+ + G+LDLN A L V+KRR+YDITNVL+GI L+ KK
Sbjct: 126 EKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAAEVLDVQKRRIYDITNVLEGIQLIRKK 185
Query: 120 SKNHIRWIGSDLSNFGAVP-QQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENE 178
+KN+I+W+G + P +Q++L +EL +L E ALD+LI+ C+ LT+DK N+
Sbjct: 186 AKNNIQWVGRGMFEDPTRPGKQQQLGQELKELMNTEQALDQLIQSCSLSFKHLTEDKANK 245
Query: 179 RLAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPREDSITVHIRSTNGPIDVYLCEV 238
RLAYVTYQDI ++ F EQ VIAVKAP +TRL+VP ED++ ++++ST GPI+VYLC
Sbjct: 246 RLAYVTYQDIRAVGNFKEQTVIAVKAPPQTRLEVPDRTEDNLQIYLKSTQGPIEVYLCPE 305
Query: 239 EQGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQS 273
E + + E + ++S+ P+ + + S
Sbjct: 306 EVQEPDSPSEEPLPSTSTLCPSPDSAQPSSSTDPS 340
>gi|4503433 E2F transcription factor 3 [Homo sapiens]
Length = 465
Score = 187 bits (474), Expect = 1e-47
Identities = 97/181 (53%), Positives = 130/181 (71%), Gaps = 2/181 (1%)
Query: 60 KRPRFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLVEKK 119
++ R+D SL LT+KF+ L+ +P G+LDLNK A L V+KRR+YDITNVL+GI L++KK
Sbjct: 175 EKTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKK 234
Query: 120 SKNHIRWIGSDLS-NFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENE 178
SKN+++W+G LS + G + Q + L +E+++LS E LDELI+ C L LT+D EN+
Sbjct: 235 SKNNVQWMGCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQ 294
Query: 179 RLAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPREDSITVHIRSTNGPIDVYLCEV 238
RLAYVTYQDI I +Q VI VKAP ETRL+VP E S+ +H+ ST GPI+VYLC
Sbjct: 295 RLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVPDSIE-SLQIHLASTQGPIEVYLCPE 353
Query: 239 E 239
E
Sbjct: 354 E 354
>gi|12669911 E2F transcription factor 1 [Homo sapiens]
Length = 437
Score = 160 bits (404), Expect = 2e-39
Identities = 104/295 (35%), Positives = 155/295 (52%), Gaps = 28/295 (9%)
Query: 11 PSLLLDPTEETVRRRCRDPINVEGLLPSKIRINLEDNVQYVS----------MRKALKVK 60
P LLL T + R P G P K R++LE + QY++ VK
Sbjct: 61 PDLLLFATPQAPRPTPSAPRPALGRPPVKRRLDLETDHQYLAESSGPARGRGRHPGKGVK 120
Query: 61 RP----RFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLV 116
P R++ SL T++F++L+ + G++DLN A L V+KRR+YDITNVL+GI L+
Sbjct: 121 SPGEKSRYETSLNLTTKRFLELLSHSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLI 180
Query: 117 EKKSKNHIRWIGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKE 176
KKSKNHI+W+GS + G + + L ++L L E LD L+ C QL L++D +
Sbjct: 181 AKKSKNHIQWLGSH-TTVGVGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTD 239
Query: 177 NERLAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPREDSITVHIRSTNGPIDVYLC 236
++RLAYVT QD+ SI EQ+V+ +KAP ET+L ++ + ++S GPIDV+LC
Sbjct: 240 SQRLAYVTCQDLRSIADPAEQMVMVIKAPPETQLQA-VDSSENFQISLKSKQGPIDVFLC 298
Query: 237 EVE------------QGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLEV 279
E Q TS + + +++ S P P S+ LL +
Sbjct: 299 PEETVGGISPGKTPSQEVTSEEENRATDSATIVSPPPSSPPSSLTTDPSQSLLSL 353
>gi|134142809 E2F transcription factor 5 isoform 2 [Homo sapiens]
Length = 345
Score = 125 bits (315), Expect = 3e-29
Identities = 82/226 (36%), Positives = 124/226 (54%), Gaps = 22/226 (9%)
Query: 63 RFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVR-KRRVYDITNVLDGIDLVEKKSK 121
R + SL LT KF+ L++ A G+LDL A L VR KRR+YDITNVL+GIDL+EKKSK
Sbjct: 50 RHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSK 109
Query: 122 NHIRW--IGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENER 179
N I+W +G+ + + + + L+ E+ DL E LD+ Q + + DD N R
Sbjct: 110 NSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNR 169
Query: 180 LAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPR-----EDSITVHIRSTNGPIDVY 234
+YVT++DI F+ ++A++AP+ T+L+VP P + ++++S +GPI V
Sbjct: 170 FSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVL 227
Query: 235 LCEVEQGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLEVS 280
L NK S +SS P P ++ S+ L V+
Sbjct: 228 LI--------NKES----SSSKPVVFPVPPPDDLTQPSSQSLTPVT 261
>gi|134142811 E2F transcription factor 5 isoform 1 [Homo sapiens]
Length = 346
Score = 125 bits (315), Expect = 3e-29
Identities = 82/226 (36%), Positives = 124/226 (54%), Gaps = 22/226 (9%)
Query: 63 RFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVR-KRRVYDITNVLDGIDLVEKKSK 121
R + SL LT KF+ L++ A G+LDL A L VR KRR+YDITNVL+GIDL+EKKSK
Sbjct: 50 RHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSK 109
Query: 122 NHIRW--IGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENER 179
N I+W +G+ + + + + L+ E+ DL E LD+ Q + + DD N R
Sbjct: 110 NSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNR 169
Query: 180 LAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPR-----EDSITVHIRSTNGPIDVY 234
+YVT++DI F+ ++A++AP+ T+L+VP P + ++++S +GPI V
Sbjct: 170 FSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVL 227
Query: 235 LCEVEQGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLEVS 280
L NK S +SS P P ++ S+ L V+
Sbjct: 228 LI--------NKES----SSSKPVVFPVPPPDDLTQPSSQSLTPVT 261
>gi|12669915 E2F transcription factor 4 [Homo sapiens]
Length = 413
Score = 122 bits (306), Expect = 4e-28
Identities = 73/184 (39%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 63 RFDVSLVYLTRKFMDLVRSAPGGILDLNKVATKLGVR-KRRVYDITNVLDGIDLVEKKSK 121
R + SL LT KF+ L++ A G+LDL A L VR KRR+YDITNVL+GI L+EKKSK
Sbjct: 17 RHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSK 76
Query: 122 NHIRW--IGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENER 179
N I+W +G + + +L+ E+ +L E LD+ Q + +T+D +N
Sbjct: 77 NSIQWKGVGPGCNTREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSC 136
Query: 180 LAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPR----EDSITVHIRSTNGPIDVYL 235
LAYVT++DI + F ++A++AP+ T L+VP P + +H++S +GPI+V L
Sbjct: 137 LAYVTHEDI--CRCFAGDTLLAIRAPSGTSLEVPIPEGLNGQKKYQIHLKSVSGPIEVLL 194
Query: 236 CEVE 239
E
Sbjct: 195 VNKE 198
>gi|145580626 E2F transcription factor 7 [Homo sapiens]
Length = 911
Score = 54.3 bits (129), Expect = 1e-07
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 58 KVKRPRFDVSLVYLTRKFMDLVRSAPGGI----LDLNKVATKLGVRKRRVYDITNVLDGI 113
K + R SL L +KF+ S P + L++VA LGV +RR+YDI NVL+ +
Sbjct: 137 KQRPSRKQKSLGLLCQKFLARYPSYPLSTEKTTISLDEVAVSLGVERRRIYDIVNVLESL 196
Query: 114 DLVEKKSKNHIRWIG-----SDLSNFGAVPQQKKLQEELSDLSAME-DALD 158
LV + +KN W G L N + +++K +E+++ L E D +D
Sbjct: 197 HLVSRVAKNQYGWHGRHSLPKTLRNLQRLGEEQKYEEQMAYLQQKELDLID 247
Score = 33.5 bits (75), Expect = 0.21
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 32/151 (21%)
Query: 63 RFDVSLVYLTRKFMDLVRSAPGGILDLNKVA-------------TKLGVRKRRVYDITNV 109
R D SL +++KF+ L + I+ L+ A +K + RR+YDI NV
Sbjct: 282 RKDKSLRIMSQKFVMLFLVSKTKIVTLDVAAKILIEESQDAPDHSKFKTKVRRLYDIANV 341
Query: 110 LDGIDLV-------EKKSKNHIRWIGS-DLSNFGAVPQQKKLQEELSDLSAMEDALDELI 161
L + L+ E+ K +WIG D S+ EEL D+SA L EL
Sbjct: 342 LTSLALIKKVHVTEERGRKPAFKWIGPVDFSS---------SDEELVDVSA--SVLPELK 390
Query: 162 KDCAQQLFELTDDKENERLAYVTYQDIHSIQ 192
++ Q+ K ++ T Q IQ
Sbjct: 391 RETYGQIQVCAKQKLARHGSFNTVQASERIQ 421
>gi|134142813 E2F transcription factor 5 isoform 3 [Homo sapiens]
Length = 185
Score = 48.5 bits (114), Expect = 6e-06
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 19/113 (16%)
Query: 173 DDKENERLAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDVPAPR-----EDSITVHIRST 227
DD N R +YVT++DI F+ ++A++AP+ T+L+VP P + ++++S
Sbjct: 2 DDSINNRFSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSH 59
Query: 228 NGPIDVYLCEVEQGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLEVS 280
+GPI V L NK S +SS P P ++ S+ L V+
Sbjct: 60 SGPIHVLLI--------NKES----SSSKPVVFPVPPPDDLTQPSSQSLTPVT 100
>gi|38505226 E2F family member 8 [Homo sapiens]
Length = 867
Score = 47.4 bits (111), Expect = 1e-05
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 58 KVKRPRFDVSLVYLTRKFMDLVRSAPGGILD----LNKVATKLGVRKRRVYDITNVLDGI 113
K + R + SL L KF+ + P ++ L++VA +L V +RR+YDI NVL+ +
Sbjct: 108 KSQPSRKEKSLGLLCHKFLARYPNYPNPAVNNDICLDEVAEELNVERRRIYDIVNVLESL 167
Query: 114 DLVEKKSKNHIRWIG-----SDLSNFGAVPQQKKLQEELSDLSAME 154
+V + +KN W G L ++ ++ K E++ + E
Sbjct: 168 HMVSRLAKNRYTWHGRHNLNKTLGTLKSIGEENKYAEQIMMIKKKE 213
Score = 37.7 bits (86), Expect = 0.011
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 55 KALKVKRPRFDVSLVYLTRKFMDLVRSAPGGI-------LDLNKVATKLGVRKRRVYDIT 107
K+L+V +F + + T + + L +A I LD +K TK+ RR+YDI
Sbjct: 264 KSLRVMSQKFVMLFLVSTPQIVSLEVAAKILIGEDHVEDLDKSKFKTKI----RRLYDIA 319
Query: 108 NVLDGIDLV-------EKKSKNHIRWIGSDLS--NFGAVPQQKKLQEELSDLSAMEDALD 158
NVL +DL+ E+ K +W G ++S G+ P + SDL + +
Sbjct: 320 NVLSSLDLIKKVHVTEERGRKPAFKWTGPEISPNTSGSSP---VIHFTPSDLEVRRSSKE 376
Query: 159 ELIKDCAQQLFELTDDKENERLAYVTYQDIHSIQAFHEQIVIAVKAPAET 208
+CA+ LF T K N + + SI++ +I A +P +T
Sbjct: 377 ----NCAKNLFS-TRGKPNFTRHPSLIKLVKSIESDRRKINSAPSSPIKT 421
>gi|6005900 transcription factor Dp-1 [Homo sapiens]
Length = 410
Score = 33.1 bits (74), Expect = 0.28
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 100 KRRVYDITNVLDGIDLVEKKSKNHIRWIGSDLSNFGAVPQ-QKKLQEELSDLSAMEDALD 158
+RRVYD NVL ++++ K+ K I+WIG ++ + + Q L + + L
Sbjct: 166 RRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQ 224
Query: 159 ELI 161
ELI
Sbjct: 225 ELI 227
>gi|5454112 transcription factor Dp-2 (E2F dimerization partner 2)
[Homo sapiens]
Length = 386
Score = 32.3 bits (72), Expect = 0.48
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 100 KRRVYDITNVLDGIDLVEKKSKNHIRWIGSDLSNFGAVPQQKKLQEELSDLSAMEDALDE 159
+RRVYD NVL ++++ K+ K I+WIG ++ +E +L + E
Sbjct: 121 RRRVYDALNVLMAMNIISKE-KKEIKWIGLPTNS----------AQECQNLEIEKQRRIE 169
Query: 160 LIKDCAQQLFEL 171
IK QL EL
Sbjct: 170 RIKQKRAQLQEL 181
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 32.0 bits (71), Expect = 0.62
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 76 MDLVRSAPGGILDLNKVATKLGVRKRRVYDITNVLDGIDLVEKKSKNHIRWIGSDLSNFG 135
+D +++ + LNK +KL +++V D+ + L+ + + + R + DL
Sbjct: 1008 LDDLQAEEDKVNSLNKTKSKL---EQQVEDLESSLEQEKKLRVDLERNKRKLEGDL---- 1060
Query: 136 AVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENERLAYVTYQ-DIHSIQAF 194
K QE + DL + LDE +K + +L E+E+ + +Q I +QA
Sbjct: 1061 -----KLAQESILDLENDKQQLDERLKKKDFEYCQLQSKVEDEQTLGLQFQKKIKELQAR 1115
Query: 195 HEQIVIAVKAPAETRLDVPAPRED 218
E++ ++A TR R D
Sbjct: 1116 IEELEEEIEAERATRAKTEKQRSD 1139
>gi|189409125 transcription factor Dp family, member 3 [Homo
sapiens]
Length = 405
Score = 32.0 bits (71), Expect = 0.62
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 100 KRRVYDITNVLDGIDLVEKKSKNHIRWIGSDLSNFG-----AVPQQKKL------QEELS 148
KRR YD NVL ++++ ++ K I+WIG ++ V +QK+L Q EL
Sbjct: 161 KRRTYDALNVLMAMNIISREKKK-IKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQ 219
Query: 149 DLSAMEDALDELI 161
L + A L+
Sbjct: 220 QLILQQIAFKNLV 232
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 32.0 bits (71), Expect = 0.62
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 226 STNGPIDVYLCEVEQGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEEL 276
STN P+ V V G T N +G GT +S + P G + + + S L
Sbjct: 676 STNSPVGVSKVLVSGGSTHNSEKKGDGTQNSANPSPSGGDSALSGELSASL 726
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 32.0 bits (71), Expect = 0.62
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 226 STNGPIDVYLCEVEQGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEEL 276
STN P+ V V G T N +G GT +S + P G + + + S L
Sbjct: 945 STNSPVGVSKVLVSGGSTHNSEKKGDGTQNSANPSPSGGDSALSGELSASL 995
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 32.0 bits (71), Expect = 0.62
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 139 QQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENERLAYVTYQDIHSIQAF---H 195
++ KLQ E+ ++ ++ I+ Q+ D+KE ERL + H + F H
Sbjct: 1479 EKGKLQREVDRITRAHAVAEKNIQHLNSQIHSFRDEKELERLQICQRKSDHLKEQFEKSH 1538
Query: 196 EQIVIAVKAPAE 207
EQ++ +KA E
Sbjct: 1539 EQLLQNIKAEKE 1550
>gi|219842212 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 31.6 bits (70), Expect = 0.81
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 23/170 (13%)
Query: 114 DLVEKKSKNHIRWIGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTD 173
D +K+++ RWIGS+ V +++K + + D + A D +L
Sbjct: 5 DAKQKRNEQLKRWIGSETDLEPPVVKRQKTKVKFDDGAVFLAACSSGDTDEVLKLL---- 60
Query: 174 DKENERLAYVTYQDIHSIQAFHEQI----VIAVKAPAETRLDVPAP-REDSITVHIRSTN 228
R A + Y ++ + A H+ V VK E ++ P E I +H ++
Sbjct: 61 ----HRGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116
Query: 229 GPIDVYLCEVEQGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLE 278
G +D+ + QG VG +SE P EEE EELL+
Sbjct: 117 GYLDIAEFLIGQG-------AHVGAVNSEGDTPLDIAEEE---AMEELLQ 156
>gi|4505317 protein phosphatase 1, regulatory (inhibitor) subunit
12A isoform a [Homo sapiens]
Length = 1030
Score = 31.6 bits (70), Expect = 0.81
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 23/170 (13%)
Query: 114 DLVEKKSKNHIRWIGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTD 173
D +K+++ RWIGS+ V +++K + + D + A D +L
Sbjct: 5 DAKQKRNEQLKRWIGSETDLEPPVVKRQKTKVKFDDGAVFLAACSSGDTDEVLKLL---- 60
Query: 174 DKENERLAYVTYQDIHSIQAFHEQI----VIAVKAPAETRLDVPAP-REDSITVHIRSTN 228
R A + Y ++ + A H+ V VK E ++ P E I +H ++
Sbjct: 61 ----HRGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116
Query: 229 GPIDVYLCEVEQGQTSNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLE 278
G +D+ + QG VG +SE P EEE EELL+
Sbjct: 117 GYLDIAEFLIGQG-------AHVGAVNSEGDTPLDIAEEE---AMEELLQ 156
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 31.6 bits (70), Expect = 0.81
Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 15/150 (10%)
Query: 127 IGSDLSNFGAVPQQKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKENERLAYVTYQ 186
I + L N G + ++ ++E+L + + L+++ A E +E E+ ++ +
Sbjct: 164 IATSLLNLGQIAEETLVEEDLGQAAKPGPGIVHLLQEAA----EGAASEEGEKGLFIQPE 219
Query: 187 DIHSIQAFHEQIVIAVKAPAETRLDV-PAPREDSITVHIRSTNGPIDVYLCEVEQGQTSN 245
D + V+ E D+ P ED+ + G + + E+ +
Sbjct: 220 DAEEV----------VEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEE 269
Query: 246 KRSEGVGTSSSESTHPEGPEEEENPQQSEE 275
+ E E E EEEE ++ EE
Sbjct: 270 EEEEDEEEEEEEEEEEEEEEEEEEEEEEEE 299
>gi|69885084 p120E4F [Homo sapiens]
Length = 784
Score = 30.8 bits (68), Expect = 1.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Query: 153 MEDALDELIKDCAQQLFELTDDKENERLAYVTYQDIHSIQAFHEQIVIAVKAPAETRLDV 212
+E D+ A ++ E T + + + V Q +H A H+ IV V ET L
Sbjct: 644 IEATADDAETSEATEIIEGTQTEVDSHIMKVVQQIVHQASAGHQIIVQNVTMDEETALGP 703
Query: 213 PAPREDSITV 222
A D+IT+
Sbjct: 704 EAAAADTITI 713
>gi|223278393 protein phosphatase 1, regulatory (inhibitor) subunit
3G [Homo sapiens]
Length = 358
Score = 30.4 bits (67), Expect = 1.8
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Query: 205 PAETRLDVPAPREDSITVHIRSTNGPIDVYLCEVEQGQTSNKRSEGVGTSSSESTHPEGP 264
P RL + AP + P V C V+ G SE + P P
Sbjct: 3 PIGARLSLEAPGPAPFREAPPAEELPAPVVPC-VQGGGDGGGASETPSPDAQLGDRPLSP 61
Query: 265 EEEENPQQSEELLE 278
+EE PQ+ EELLE
Sbjct: 62 KEEAAPQEQEELLE 75
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 30.4 bits (67), Expect = 1.8
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 196 EQIVIAVKAPAETRL----DVPAPREDSITVHIRSTNGPIDVYLCEVEQGQTSNKRSEGV 251
E IV KA + ++ + P+ED R + E E+G+ + S V
Sbjct: 1190 EPIVSIPKAGRKPKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEV 1249
Query: 252 GTSS---------SESTHPEGPEEEENPQQSEE 275
+S +E+ PE EEEE P+ SEE
Sbjct: 1250 PAASPADSSNSPETETKEPEVEEEEEKPRVSEE 1282
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 30.4 bits (67), Expect = 1.8
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 196 EQIVIAVKAPAETRL----DVPAPREDSITVHIRSTNGPIDVYLCEVEQGQTSNKRSEGV 251
E IV KA + ++ + P+ED R + E E+G+ + S V
Sbjct: 1190 EPIVSIPKAGRKPKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEV 1249
Query: 252 GTSS---------SESTHPEGPEEEENPQQSEE 275
+S +E+ PE EEEE P+ SEE
Sbjct: 1250 PAASPADSSNSPETETKEPEVEEEEEKPRVSEE 1282
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 30.4 bits (67), Expect = 1.8
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 196 EQIVIAVKAPAETRL----DVPAPREDSITVHIRSTNGPIDVYLCEVEQGQTSNKRSEGV 251
E IV KA + ++ + P+ED R + E E+G+ + S V
Sbjct: 1190 EPIVSIPKAGRKPKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEAEEGEEEDAASSEV 1249
Query: 252 GTSS---------SESTHPEGPEEEENPQQSEE 275
+S +E+ PE EEEE P+ SEE
Sbjct: 1250 PAASPADSSNSPETETKEPEVEEEEEKPRVSEE 1282
>gi|55743140 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 30.4 bits (67), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 244 SNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLE 278
S ++ EG + SE H E P+ EE P++ E+L E
Sbjct: 3 SCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEE 37
>gi|55743147 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 30.4 bits (67), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 244 SNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLE 278
S ++ EG + SE H E P+ EE P++ E+L E
Sbjct: 3 SCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEE 37
>gi|10047100 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 30.4 bits (67), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 244 SNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLE 278
S ++ EG + SE H E P+ EE P++ E+L E
Sbjct: 3 SCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEE 37
>gi|55743145 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 30.4 bits (67), Expect = 1.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 244 SNKRSEGVGTSSSESTHPEGPEEEENPQQSEELLE 278
S ++ EG + SE H E P+ EE P++ E+L E
Sbjct: 3 SCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEE 37
>gi|226497734 RNA binding motif protein 19 [Homo sapiens]
Length = 960
Score = 30.0 bits (66), Expect = 2.4
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 31/169 (18%)
Query: 96 LGVRKRRVYDITNVLDGIDLVEKKSKN-----------------HIRWIGSDLSNFGAVP 138
L V +RR T DG+D K K+ G DL ++
Sbjct: 137 LSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQESEEEGAGEDLEEEASLE 196
Query: 139 QQKKLQEELSDLSAMEDAL----------DELIKDCAQQLFELTDDKENERLAYVTYQDI 188
+ +Q+ELSD+ ++ + +E +D A E ++ +E + A Q+
Sbjct: 197 PKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGSEAEEEDSSATPVLQER 256
Query: 189 HSIQAFHEQ-IVIAVKAPAETRLDV--PAPREDSITVH-IRSTNGPIDV 233
S A EQ + K P E R + PA +++ T H ++ P +V
Sbjct: 257 DSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRGAPFNV 305
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,602,194
Number of Sequences: 37866
Number of extensions: 462918
Number of successful extensions: 2045
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 1971
Number of HSP's gapped (non-prelim): 101
length of query: 281
length of database: 18,247,518
effective HSP length: 101
effective length of query: 180
effective length of database: 14,423,052
effective search space: 2596149360
effective search space used: 2596149360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.