Search of human proteins with 9966795

Search of human proteins with 9966795

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|9966795 phospholipid scramblase 2 [Homo sapiens]
         (224 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|9966795 phospholipid scramblase 2 [Homo sapiens]                   475   e-134
gi|10863877 phospholipid scramblase 1 [Homo sapiens]                  409   e-114
gi|146229354 phospholipid scramblase family, member 5 [Homo sapi...   298   3e-81
gi|31543417 phospholipid scramblase 3 [Homo sapiens]                  257   5e-69
gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens]       241   3e-64
gi|190194379 phospholipid scramblase 4 isoform a [Homo sapiens]       241   3e-64
gi|190194377 phospholipid scramblase 4 isoform a [Homo sapiens]       241   3e-64
gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens]       126   1e-29
gi|239742160 PREDICTED: similar to hCG1794790 [Homo sapiens]           96   3e-20
gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens]           92   4e-19
gi|239748259 PREDICTED: similar to hCG1794790 [Homo sapiens]           92   4e-19
gi|28557777 immunoglobulin-like domain containing receptor 1 [Ho...    32   0.57 
gi|21553329 family with sequence similarity 84, member A [Homo s...    30   2.2  
gi|183396797 keratin associated protein KRTAP2.1A [Homo sapiens]       28   4.9  
gi|15082232 keratin associated protein 2-4 [Homo sapiens]              28   4.9  
gi|225690576 keratin associated protein 2-2 [Homo sapiens]             28   4.9  
gi|113427417 PREDICTED: similar to keratin associated protein 2-...    28   4.9  
gi|39752687 hypothetical protein LOC375791 [Homo sapiens]              28   4.9  
gi|13376888 hole protein [Homo sapiens]                                28   4.9  
gi|122937193 DNB5 [Homo sapiens]                                       28   6.3  
gi|109638751 ubiquitin specific protease 6 [Homo sapiens]              28   6.3  
gi|217035113 organic solute transporter alpha [Homo sapiens]           28   6.3  
gi|4507465 transforming growth factor, beta 3 [Homo sapiens]           28   8.3  
gi|49574543 zinc finger protein 616 [Homo sapiens]                     28   8.3  
gi|21389599 zinc finger protein 570 [Homo sapiens]                     28   8.3  

>gi|9966795 phospholipid scramblase 2 [Homo sapiens]
          Length = 224

 Score =  475 bits (1223), Expect = e-134
 Identities = 224/224 (100%), Positives = 224/224 (100%)

Query: 1   MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60
           MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED
Sbjct: 1   MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60

Query: 61  TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGY 120
           TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGY
Sbjct: 61  TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGY 120

Query: 121 VTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHWSG 180
           VTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHWSG
Sbjct: 121 VTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHWSG 180

Query: 181 FLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERTR 224
           FLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERTR
Sbjct: 181 FLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERTR 224


>gi|10863877 phospholipid scramblase 1 [Homo sapiens]
          Length = 318

 Score =  409 bits (1050), Expect = e-114
 Identities = 189/223 (84%), Positives = 203/223 (91%)

Query: 1   MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60
           MPAP PPLNCPPGLEYLSQID ILIHQQIELLEVL  FE++N YEIKNSFGQR+YFAAED
Sbjct: 86  MPAPQPPLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAAED 145

Query: 61  TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGY 120
           T+ C RNCCG SRPFTLRI DN+G+EVITLERPLRC+ CCCPCCLQEIEIQAPPGVP+GY
Sbjct: 146 TDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLRCSSCCCPCCLQEIEIQAPPGVPIGY 205

Query: 121 VTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHWSG 180
           V QTWHPCL KFTI+N+KREDVLKISGPC+VCSC   VDFEI SLDEQ VVG+ISKHW+G
Sbjct: 206 VIQTWHPCLPKFTIQNEKREDVLKISGPCVVCSCCGDVDFEIKSLDEQCVVGKISKHWTG 265

Query: 181 FLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERT 223
            LREAFTDADNFGIQFP DLDVKMKAVMIGACFLID+MFFE T
Sbjct: 266 ILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLIDFMFFEST 308


>gi|146229354 phospholipid scramblase family, member 5 [Homo
           sapiens]
          Length = 271

 Score =  298 bits (762), Expect = 3e-81
 Identities = 136/218 (62%), Positives = 168/218 (77%)

Query: 6   PPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAEDTNFCI 65
           P ++ PPGLEYLSQ+D+I+IHQQ+ELL ++   E+SN YEIKNS GQRIYFA E++    
Sbjct: 50  PTVSLPPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFN 109

Query: 66  RNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGYVTQTW 125
           R  C   R  TLRITDN GREVIT+ RPLRCN C CPC LQE+EIQAPPG  VGYVTQ W
Sbjct: 110 RTFCSTLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKW 169

Query: 126 HPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHWSGFLREA 185
            P L KFTI+N  +ED+LKI GPC+ C C   VDFE+ +++E++ +G+ISK+WSGF+ + 
Sbjct: 170 DPFLPKFTIQNANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDV 229

Query: 186 FTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERT 223
           FT+ADNFGI  P DLDV +KA MIGACFL D+MFFE +
Sbjct: 230 FTNADNFGIHVPADLDVTVKAAMIGACFLFDFMFFEHS 267


>gi|31543417 phospholipid scramblase 3 [Homo sapiens]
          Length = 295

 Score =  257 bits (657), Expect = 5e-69
 Identities = 121/221 (54%), Positives = 156/221 (70%), Gaps = 1/221 (0%)

Query: 3   APPPPL-NCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAEDT 61
           AP  PL   P GLE+L QID ILIHQ+ E +E    +E+ N YE+++  GQ +  AAE++
Sbjct: 64  APFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAAEES 123

Query: 62  NFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGYV 121
           N C R CCG  RP  +R+ D   REV+ L RPL C C CCPC LQE+E+QAPPG  +G+V
Sbjct: 124 NCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHV 183

Query: 122 TQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHWSGF 181
            QTWHP L KF+I++  R+ VL++ GPC  C C    +FE+ + DE   VGRISK W G 
Sbjct: 184 LQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQWGGL 243

Query: 182 LREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFER 222
           +REA TDAD+FG+QFP DLDV++KAV++GA FLIDYMFFE+
Sbjct: 244 VREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEK 284


>gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens]
          Length = 329

 Score =  241 bits (616), Expect = 3e-64
 Identities = 112/225 (49%), Positives = 154/225 (68%), Gaps = 3/225 (1%)

Query: 1   MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60
           MP P P  NCPPGLEYL Q+D I + Q  E LE++  FE++N Y+IKN+  Q +Y   ED
Sbjct: 100 MPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTED 159

Query: 61  TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCC--CCPCCLQEIEIQAPPGVPV 118
           T+   RN     RPF LR+TD +GRE++T++RP RC CC  CCP   QE+E+Q PPGV +
Sbjct: 160 TDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTI 219

Query: 119 GYVTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHW 178
           G+V + W+ C   ++I+N+K+E+V+++ GPC    C +   FE+ SLD    +G I + W
Sbjct: 220 GFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKW 279

Query: 179 SGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERT 223
           +G L  A  DAD+F I FP DLDVKMKA++ GACFLID+M+FER+
Sbjct: 280 NGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERS 323


>gi|190194379 phospholipid scramblase 4 isoform a [Homo sapiens]
          Length = 329

 Score =  241 bits (616), Expect = 3e-64
 Identities = 112/225 (49%), Positives = 154/225 (68%), Gaps = 3/225 (1%)

Query: 1   MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60
           MP P P  NCPPGLEYL Q+D I + Q  E LE++  FE++N Y+IKN+  Q +Y   ED
Sbjct: 100 MPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTED 159

Query: 61  TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCC--CCPCCLQEIEIQAPPGVPV 118
           T+   RN     RPF LR+TD +GRE++T++RP RC CC  CCP   QE+E+Q PPGV +
Sbjct: 160 TDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTI 219

Query: 119 GYVTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHW 178
           G+V + W+ C   ++I+N+K+E+V+++ GPC    C +   FE+ SLD    +G I + W
Sbjct: 220 GFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKW 279

Query: 179 SGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERT 223
           +G L  A  DAD+F I FP DLDVKMKA++ GACFLID+M+FER+
Sbjct: 280 NGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERS 323


>gi|190194377 phospholipid scramblase 4 isoform a [Homo sapiens]
          Length = 329

 Score =  241 bits (616), Expect = 3e-64
 Identities = 112/225 (49%), Positives = 154/225 (68%), Gaps = 3/225 (1%)

Query: 1   MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60
           MP P P  NCPPGLEYL Q+D I + Q  E LE++  FE++N Y+IKN+  Q +Y   ED
Sbjct: 100 MPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTED 159

Query: 61  TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCC--CCPCCLQEIEIQAPPGVPV 118
           T+   RN     RPF LR+TD +GRE++T++RP RC CC  CCP   QE+E+Q PPGV +
Sbjct: 160 TDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTI 219

Query: 119 GYVTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHW 178
           G+V + W+ C   ++I+N+K+E+V+++ GPC    C +   FE+ SLD    +G I + W
Sbjct: 220 GFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKW 279

Query: 179 SGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERT 223
           +G L  A  DAD+F I FP DLDVKMKA++ GACFLID+M+FER+
Sbjct: 280 NGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERS 323


>gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens]
          Length = 239

 Score =  126 bits (317), Expect = 1e-29
 Identities = 57/119 (47%), Positives = 84/119 (70%), Gaps = 1/119 (0%)

Query: 105 LQEIEIQAPPGVPVGYVTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITS 164
           L ++E+Q PPGV +G+V + W+ C   ++I+N+K+E+V+++ GPC    C +   FE+ S
Sbjct: 116 LVQLEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKS 175

Query: 165 LDEQIVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERT 223
           LD    +G I + W+G L  A  DAD+F I FP DLDVKMKA++ GACFLID+M+FER+
Sbjct: 176 LDGISNIGSIIRKWNGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERS 233



 Score = 37.4 bits (85), Expect = 0.010
 Identities = 14/22 (63%), Positives = 17/22 (77%)

Query: 1   MPAPPPPLNCPPGLEYLSQIDM 22
           MP P P  NCPPGLEYL Q+++
Sbjct: 100 MPGPTPMANCPPGLEYLVQLEV 121


>gi|239742160 PREDICTED: similar to hCG1794790 [Homo sapiens]
          Length = 172

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 47/97 (48%), Positives = 63/97 (64%)

Query: 1   MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60
           +  P    +CP GLEYL QI+ + + Q  + L VL  FE+S  YEI N+ GQRIYFA E 
Sbjct: 10  LSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQGQRIYFAEER 69

Query: 61  TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCN 97
            N  +R+ CG S PFT+ I DNVGR+V+ L + L+C+
Sbjct: 70  NNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCS 106


>gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens]
          Length = 172

 Score = 92.0 bits (227), Expect = 4e-19
 Identities = 46/97 (47%), Positives = 62/97 (63%)

Query: 1   MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60
           +  P    +CP GLEYL QI+ + + Q  + L VL  FE+S  YEI N+  QRIYFA E 
Sbjct: 10  LSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEER 69

Query: 61  TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCN 97
            N  +R+ CG S PFT+ I DNVGR+V+ L + L+C+
Sbjct: 70  NNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCS 106



 Score = 80.9 bits (198), Expect = 8e-16
 Identities = 35/61 (57%), Positives = 51/61 (83%)

Query: 161 EITSLDEQIVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFF 220
           ++ +LDE++V+G+ISK +SGF+R   T+ + FGIQFP DLDVK+K +M+GA FLI+YM+F
Sbjct: 109 KLLTLDEEMVIGKISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYF 168

Query: 221 E 221
           E
Sbjct: 169 E 169


>gi|239748259 PREDICTED: similar to hCG1794790 [Homo sapiens]
          Length = 172

 Score = 92.0 bits (227), Expect = 4e-19
 Identities = 46/97 (47%), Positives = 62/97 (63%)

Query: 1   MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60
           +  P    +CP GLEYL QI+ + + Q  + L VL  FE+S  YEI N+  QRIYFA E 
Sbjct: 10  LSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEER 69

Query: 61  TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCN 97
            N  +R+ CG S PFT+ I DNVGR+V+ L + L+C+
Sbjct: 70  NNCFLRHLCGFSSPFTMTIYDNVGRDVLALHKALKCS 106



 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 36/61 (59%), Positives = 52/61 (85%)

Query: 161 EITSLDEQIVVGRISKHWSGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFF 220
           ++ +LDE++V+G+ISK +SGF+R   T+ + FGIQFP DLDVK+KA+M+GA FLI+YM+F
Sbjct: 109 KLLTLDEEMVIGKISKQYSGFVRGILTNGEKFGIQFPFDLDVKIKALMLGATFLIEYMYF 168

Query: 221 E 221
           E
Sbjct: 169 E 169


>gi|28557777 immunoglobulin-like domain containing receptor 1 [Homo
           sapiens]
          Length = 502

 Score = 31.6 bits (70), Expect = 0.57
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 94  LRCNCCCCPCCLQEIEIQAPPGVPVGYVTQT 124
           +RC CC   CC  E ++  P  +P   +TQT
Sbjct: 201 IRCPCCPAHCCCPEEDLSLPSSLPQMPMTQT 231


>gi|21553329 family with sequence similarity 84, member A [Homo
           sapiens]
          Length = 292

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 2   PAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAEDT 61
           PAP PP   P    Y+    +I +HQ     + L+   ++N+  + NS+ +     AE  
Sbjct: 133 PAPEPPAPAPHWAVYVGGGQIIHLHQGEIRQDSLYEAGAANVGRVVNSWYRYRPLVAE-- 190

Query: 62  NFCIRNCCG 70
              ++N CG
Sbjct: 191 -LVVQNACG 198


>gi|183396797 keratin associated protein KRTAP2.1A [Homo sapiens]
          Length = 128

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 13/55 (23%)

Query: 64  CIRNCCGRS----RPFTLRITDNVGREVITLER-------PLRCNCCCCPCCLQE 107
           C + CC R     RP T + T  V R V  + R       P R   CC PC LQE
Sbjct: 19  CCQPCCCRDPCCCRPVTCQTT--VCRPVTCVPRCTRPICEPCRRPVCCDPCSLQE 71


>gi|15082232 keratin associated protein 2-4 [Homo sapiens]
          Length = 128

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 13/55 (23%)

Query: 64  CIRNCCGRS----RPFTLRITDNVGREVITLER-------PLRCNCCCCPCCLQE 107
           C + CC R     RP T + T  V R V  + R       P R   CC PC LQE
Sbjct: 19  CCQPCCCRDPCCCRPVTCQTT--VCRPVTCVPRCTRPICEPCRRPVCCDPCSLQE 71


>gi|225690576 keratin associated protein 2-2 [Homo sapiens]
          Length = 123

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 13/55 (23%)

Query: 64  CIRNCCGRS----RPFTLRITDNVGREVITLER-------PLRCNCCCCPCCLQE 107
           C + CC R     RP T + T  V R V  + R       P R   CC PC LQE
Sbjct: 19  CCQPCCCRDPCCCRPVTCQTT--VCRPVTCVPRCTRPICEPCRRPVCCDPCSLQE 71


>gi|113427417 PREDICTED: similar to keratin associated protein 2-4
           [Homo sapiens]
          Length = 128

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 13/55 (23%)

Query: 64  CIRNCCGRS----RPFTLRITDNVGREVITLER-------PLRCNCCCCPCCLQE 107
           C + CC R     RP T + T  V R V  + R       P R   CC PC LQE
Sbjct: 19  CCQPCCCRDPCCCRPVTCQTT--VCRPVTCVPRCTRPICEPCRRPVCCDPCSLQE 71


>gi|39752687 hypothetical protein LOC375791 [Homo sapiens]
          Length = 144

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 97  NCCCCPCC 104
           +CCCCPCC
Sbjct: 117 HCCCCPCC 124


>gi|13376888 hole protein [Homo sapiens]
          Length = 319

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 10/18 (55%), Positives = 14/18 (77%)

Query: 1   MPAPPPPLNCPPGLEYLS 18
           +P PPPPL+ PPG  ++S
Sbjct: 293 VPPPPPPLHGPPGRPHMS 310


>gi|122937193 DNB5 [Homo sapiens]
          Length = 748

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)

Query: 2  PAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFS 37
          P+PPPP N P  LE    +D   +H Q    E+LF+
Sbjct: 58 PSPPPPPNTPCPLEL---VDFGDLHPQRSFRELLFN 90


>gi|109638751 ubiquitin specific protease 6 [Homo sapiens]
          Length = 1406

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 67  NCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGYVTQTWH 126
           NC G   PFTLR+    G       +   C  C   C      I         Y+   WH
Sbjct: 945 NCMGYQYPFTLRVVQKDGNSCAWCPQYRFCRGCKIDCGEDRAFIGN------AYIAVDWH 998

Query: 127 P 127
           P
Sbjct: 999 P 999


>gi|217035113 organic solute transporter alpha [Homo sapiens]
          Length = 340

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 98  CCCCPCC 104
           CCCCPCC
Sbjct: 161 CCCCPCC 167


>gi|4507465 transforming growth factor, beta 3 [Homo sapiens]
          Length = 412

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 6/50 (12%)

Query: 58  AEDTNFCIR----NCCGRSRPFTLRITDNVGREVITLERPLRCNCCCCPC 103
           A DTN+C R    NCC   RP  +    ++G + +   +    N C  PC
Sbjct: 301 ALDTNYCFRNLEENCC--VRPLYIDFRQDLGWKWVHEPKGYYANFCSGPC 348


>gi|49574543 zinc finger protein 616 [Homo sapiens]
          Length = 781

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 67  NCCGRSRPFTLRITDNVGREVITLERPLRCNCC 99
           N CG+S  F+ R+   + + V T ERP +CN C
Sbjct: 300 NLCGKS--FSQRVHLRLHQTVHTGERPFKCNEC 330


>gi|21389599 zinc finger protein 570 [Homo sapiens]
          Length = 536

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 7   PLNCPPGLEYLSQIDMILIHQQIELLEVLFS-FESSNMYEIKNSFGQ--RIYFAAEDTNF 63
           P  C    +  SQ   +  HQ++   E  +   E    +  ++S  Q  R++   E    
Sbjct: 301 PYECKVCRKAFSQFAYLAQHQRVHTGEKPYECIECGKAFSNRSSIAQHQRVH-TGEKPYE 359

Query: 64  CIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCC 99
           C  N CG++  F+LR    V + + T ERP  C  C
Sbjct: 360 C--NVCGKA--FSLRAYLTVHQRIHTGERPYECKEC 391


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.143    0.471 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,538,503
Number of Sequences: 37866
Number of extensions: 416698
Number of successful extensions: 2770
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2719
Number of HSP's gapped (non-prelim): 48
length of query: 224
length of database: 18,247,518
effective HSP length: 98
effective length of query: 126
effective length of database: 14,536,650
effective search space: 1831617900
effective search space used: 1831617900
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.