Search of human proteins with 9910418

Search of human proteins with 9910418

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|9910418 mouse Mdm1 nuclear protein homolog isoform 2 [Homo
sapiens]
         (222 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|9910418 mouse Mdm1 nuclear protein homolog isoform 2 [Homo sa...   444   e-125
gi|182515228 mouse Mdm1 nuclear protein homolog isoform 1 [Homo ...   338   2e-93
gi|46370073 GRB2-associated binding protein 1 isoform b [Homo sa...    35   0.067
gi|22749303 hypothetical protein LOC196477 [Homo sapiens]              34   0.11 
gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens]              33   0.25 
gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens]             33   0.25 
gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens]             33   0.25 
gi|148806881 hypothetical protein LOC57608 [Homo sapiens]              33   0.25 
gi|70778869 invasion inhibitory protein 45 [Homo sapiens]              32   0.33 
gi|38788260 bromodomain PHD finger transcription factor isoform ...    32   0.56 
gi|153945728 microtubule-associated protein 1B [Homo sapiens]          32   0.56 
gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]             32   0.56 
gi|222352127 sidekick 2 [Homo sapiens]                                 30   1.3  
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]          30   1.3  
gi|169206175 PREDICTED: similar to hCG28707 [Homo sapiens]             30   1.3  
gi|169206491 PREDICTED: similar to hCG28707 [Homo sapiens]             30   1.3  
gi|113424170 PREDICTED: similar to hCG28707 [Homo sapiens]             30   1.3  
gi|4757836 BRCA1 associated protein-1 [Homo sapiens]                   30   1.3  
gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]          30   1.3  
gi|130502162 RAS protein activator like 3 [Homo sapiens]               30   1.3  
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [...    30   1.6  
gi|153792012 DNA polymerase zeta [Homo sapiens]                        30   1.6  
gi|4505507 oligophrenin 1 [Homo sapiens]                               30   1.6  
gi|41152076 steroid-sensitive protein 1 [Homo sapiens]                 30   1.6  
gi|41152074 steroid-sensitive protein 1 [Homo sapiens]                 30   1.6  
gi|55749621 pleckstrin homology domain containing, family G, mem...    30   1.6  
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap...    30   1.6  
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap...    30   1.6  
gi|110349719 titin isoform N2-A [Homo sapiens]                         30   2.1  
gi|110349717 titin isoform novex-2 [Homo sapiens]                      30   2.1  

>gi|9910418 mouse Mdm1 nuclear protein homolog isoform 2 [Homo
           sapiens]
          Length = 222

 Score =  444 bits (1142), Expect = e-125
 Identities = 222/222 (100%), Positives = 222/222 (100%)

Query: 1   MPVRFKGLSEYQRNFLWKKSYLSESCNSSVGRKYPWAGLRSDQLGITKEPSFISKRRVPY 60
           MPVRFKGLSEYQRNFLWKKSYLSESCNSSVGRKYPWAGLRSDQLGITKEPSFISKRRVPY
Sbjct: 1   MPVRFKGLSEYQRNFLWKKSYLSESCNSSVGRKYPWAGLRSDQLGITKEPSFISKRRVPY 60

Query: 61  HDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTR 120
           HDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTR
Sbjct: 61  HDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTR 120

Query: 121 SHSADSRAEGASDVENNEGVTNHTPVNENVELEHSTKVLSENVDNGVGIFTAFLFKSIEF 180
           SHSADSRAEGASDVENNEGVTNHTPVNENVELEHSTKVLSENVDNGVGIFTAFLFKSIEF
Sbjct: 121 SHSADSRAEGASDVENNEGVTNHTPVNENVELEHSTKVLSENVDNGVGIFTAFLFKSIEF 180

Query: 181 FIGFIVISVILHFVFQNFPLLFSCLMSIRIVDNRLLTLVIVN 222
           FIGFIVISVILHFVFQNFPLLFSCLMSIRIVDNRLLTLVIVN
Sbjct: 181 FIGFIVISVILHFVFQNFPLLFSCLMSIRIVDNRLLTLVIVN 222


>gi|182515228 mouse Mdm1 nuclear protein homolog isoform 1 [Homo
           sapiens]
          Length = 714

 Score =  338 bits (867), Expect = 2e-93
 Identities = 166/167 (99%), Positives = 167/167 (100%)

Query: 1   MPVRFKGLSEYQRNFLWKKSYLSESCNSSVGRKYPWAGLRSDQLGITKEPSFISKRRVPY 60
           MPVRFKGLSEYQRNFLWKKSYLSESCNSSVGRKYPWAGLRSDQLGITKEPSFISKRRVPY
Sbjct: 1   MPVRFKGLSEYQRNFLWKKSYLSESCNSSVGRKYPWAGLRSDQLGITKEPSFISKRRVPY 60

Query: 61  HDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTR 120
           HDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTR
Sbjct: 61  HDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTR 120

Query: 121 SHSADSRAEGASDVENNEGVTNHTPVNENVELEHSTKVLSENVDNGV 167
           SHSADSRAEGASDVENNEGVTNHTPVNENVELEHSTKVLSENVDNG+
Sbjct: 121 SHSADSRAEGASDVENNEGVTNHTPVNENVELEHSTKVLSENVDNGL 167


>gi|46370073 GRB2-associated binding protein 1 isoform b [Homo
           sapiens]
          Length = 694

 Score = 34.7 bits (78), Expect = 0.067
 Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 11/126 (8%)

Query: 44  LGITKEPSFISKRRVPYHD---PQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQK 100
           +G    P    +R VP  D   P + ++L+ +  +  + +   P PE  E    Q   + 
Sbjct: 495 MGFRSSPKTPPRRPVPVADCEPPPVDRNLKPDRKVKPAPLEIKPLPEWEEL---QAPVRS 551

Query: 101 DVTQERVHSLEASRVPKRTRSHSADSRAEGASDVENNEGVTNHTPVNENVELEHSTKVLS 160
            +T  R  + ++SR P   R  S  S    +   ++ E   N+ P+N N+  E      S
Sbjct: 552 PIT--RSFARDSSRFPMSPRPDSVHSTTSSSDSHDSEE---NYVPMNPNLSSEDPNLFGS 606

Query: 161 ENVDNG 166
            ++D G
Sbjct: 607 NSLDGG 612


>gi|22749303 hypothetical protein LOC196477 [Homo sapiens]
          Length = 406

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 9/103 (8%)

Query: 73  GAISESNVVASPEPE-----AP----ETPKSQEAEQKDVTQERVHSLEASRVPKRTRSHS 123
           G +   ++  SP PE     AP    E  + +  ++++  QE   + EAS   +      
Sbjct: 252 GFVQNPSLAFSPNPEENQSLAPLLVEEEEEKKNDDEEEYDQEVCDAKEASEEEEEVEDEE 311

Query: 124 ADSRAEGASDVENNEGVTNHTPVNENVELEHSTKVLSENVDNG 166
            +   E   +VE  E V       E  ELE   +VL EN   G
Sbjct: 312 EEVEDEEEEEVEEAEYVEEGEEELEEEELEEEEEVLEENEQRG 354


>gi|15011902 synaptotagmin-like 2 isoform a [Homo sapiens]
          Length = 910

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 7/118 (5%)

Query: 52  FISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLE 111
           ++SK     H P  S S   NG  S S V+ +       +P   E + K     R+ S+ 
Sbjct: 400 YVSKSET--HQPMTSGSFPINGLHSHSEVLTARPQSMENSPTINEPKDKSSELTRLESV- 456

Query: 112 ASRVPKRTRSHSAD---SRAEGASDVENNEGVTNH-TPVNENVELEHSTKVLSENVDN 165
             R P    SH  +   S+  G S  +  +G     +PV + +E   + K+ S+++++
Sbjct: 457 LPRSPADELSHCVEPEPSQVPGGSSRDRQQGSEEEPSPVLKTLERSAARKMPSKSLED 514


>gi|244790020 synaptotagmin-like 2 isoform i [Homo sapiens]
          Length = 935

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 7/118 (5%)

Query: 52  FISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLE 111
           ++SK     H P  S S   NG  S S V+ +       +P   E + K     R+ S+ 
Sbjct: 401 YVSKSET--HQPMTSGSFPINGLHSHSEVLTARPQSMENSPTINEPKDKSSELTRLESV- 457

Query: 112 ASRVPKRTRSHSAD---SRAEGASDVENNEGVTNH-TPVNENVELEHSTKVLSENVDN 165
             R P    SH  +   S+  G S  +  +G     +PV + +E   + K+ S+++++
Sbjct: 458 LPRSPADELSHCVEPEPSQVPGGSSRDRQQGSEEEPSPVLKTLERSAARKMPSKSLED 515


>gi|244790013 synaptotagmin-like 2 isoform g [Homo sapiens]
          Length = 934

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 7/118 (5%)

Query: 52  FISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLE 111
           ++SK     H P  S S   NG  S S V+ +       +P   E + K     R+ S+ 
Sbjct: 400 YVSKSET--HQPMTSGSFPINGLHSHSEVLTARPQSMENSPTINEPKDKSSELTRLESV- 456

Query: 112 ASRVPKRTRSHSAD---SRAEGASDVENNEGVTNH-TPVNENVELEHSTKVLSENVDN 165
             R P    SH  +   S+  G S  +  +G     +PV + +E   + K+ S+++++
Sbjct: 457 LPRSPADELSHCVEPEPSQVPGGSSRDRQQGSEEEPSPVLKTLERSAARKMPSKSLED 514


>gi|148806881 hypothetical protein LOC57608 [Homo sapiens]
          Length = 1359

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 45   GITKEPSFISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDV 102
            G TK P F+  R      PQ  +  + +G ++ ++ V  PEP   E   S+  EQKDV
Sbjct: 1152 GWTKSPLFVGDRDSARRAPQAFEHSDVDGVVTSTDPVPEPEPSPLE---SKFFEQKDV 1206


>gi|70778869 invasion inhibitory protein 45 [Homo sapiens]
          Length = 388

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 78  SNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRT 119
           S  +  P P+  +TP+S  A+Q  +++ RV   E S VPKR+
Sbjct: 128 SGRLGDPGPQEAQTPRSILAQQSKLSKPRVTFSEESAVPKRS 169


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
           [Homo sapiens]
          Length = 2903

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 10/102 (9%)

Query: 75  ISESNVVASPEPEAPETP-KSQEAEQKDVTQERVH-SLEASRVPKRTRSHSADSRAEGAS 132
           ++E  V +    + PE P K+ E+     T   +  +LE S       S  ++S A+ A 
Sbjct: 670 MAEKKVASELPQDVPEEPNKTCESSNTSATTTSIQPNLENSNSSSELNSSQSES-AKAAD 728

Query: 133 DVENNEGVTNHTPVNENVEL------EHSTKVLSENVDNGVG 168
           D EN E   +HTPV+   E+      E S   LSE+   G G
Sbjct: 729 DPENGER-ESHTPVSIQEEIVGDFKSEKSNGELSESPGAGKG 769


>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
          Length = 2468

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 49   EPSFISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAPETPKS-----QEAEQKDVT 103
            + S +S +  P  +P  ++  + +  IS S V ASP   +  TP       QE    DV 
Sbjct: 1695 QDSSLSHKIPPMEEPSYTQDNDLSELISVSQVEASPSTSSAHTPSQIASPLQEDTLSDVA 1754

Query: 104  QERVHSLEASRVPKRTRS 121
              R  SL AS   ++ +S
Sbjct: 1755 PPRDMSLYASLTSEKVQS 1772


>gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]
          Length = 698

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 67  KSLEWNGAISESNVVAS-PEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTRSHSAD 125
           KSL+ + ++ E+   AS  EP  P++P  + A + +  Q  V  L A    +RT    + 
Sbjct: 562 KSLDLDHSMDEAGAGASNSEPSEPDSPTREHARRSEALQGLVTELRAELCRQRTEYERSV 621

Query: 126 SR-AEGASDV 134
            R  EG++D+
Sbjct: 622 KRIEEGSADL 631


>gi|222352127 sidekick 2 [Homo sapiens]
          Length = 2172

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 10/117 (8%)

Query: 47   TKEPSFISKRRVPYHDPQISKSLEWNGAI-SESNVVASPEPEAPETPKSQEAEQKDVTQE 105
            T+ P   S   + Y D  ++K   +N  I +ES+ +     E  ++  S    + D   +
Sbjct: 2012 TRSPPRPSPGSLHYSDEDVTK---YNDLIPAESSSLTEKPSEISDSQGSDSEYEVDSNHQ 2068

Query: 106  RVHSLEASRVPKRT------RSHSADSRAEGASDVENNEGVTNHTPVNENVELEHST 156
            + HS     +   T      R     SRA+  S  E++ G  +HT V  +   +  +
Sbjct: 2069 KAHSFVNHYISDPTYYNSWRRQQKGISRAQAYSYTESDSGEPDHTTVTNSTSTQQGS 2125


>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
          Length = 715

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 24  ESCNSSVGRKYPWAGLRSDQLGITKEPSFISKRRVPYHDPQISKSLEWNGAISESNVVAS 83
           +S +SS  R +  +   + Q G ++ P   SK +   H    + S E N + S ++   S
Sbjct: 583 QSRSSSEERDHSRSRSPNKQSGYSR-PRASSKEKA--HSRSRTPSKEGNHSQSRTSSKES 639

Query: 84  PEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTRSHSADSRAEGASDVENNEGVTNH 143
            +P     P+S + ++      R  SL  +R P +T SHS  +   G   +  ++   + 
Sbjct: 640 -DPSQSTVPRSPDWKRSPT---RTSSLSQNRTPSKTSSHSPSTFPSGGQTLSQDDSQADA 695

Query: 144 TPVNENVELEHSTKVLSE 161
           T     +  E S+   S+
Sbjct: 696 TTSKATLPGERSSSSSSK 713


>gi|169206175 PREDICTED: similar to hCG28707 [Homo sapiens]
          Length = 386

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 86  PEAPETPKSQEAEQKDV-TQERVHSLEASRVPKRTRSHSADSRAEGASDVENN-EGVTNH 143
           P A E     E    DV T  R HSL ++ + +  R HS D  A     V+      T H
Sbjct: 233 PRAAEASLPNEDVDFDVATSSREHSLHSNWILRAPRRHSEDIAAHTVHTVDGQFRRSTEH 292

Query: 144 TPVNENVELEHSTKVLSENVDNGVGIFTAFLFK 176
             V     LE     L + V+   G F  + FK
Sbjct: 293 RTVGTQRRLERHPIYLPKAVE---GAFNTWKFK 322


>gi|169206491 PREDICTED: similar to hCG28707 [Homo sapiens]
          Length = 386

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 86  PEAPETPKSQEAEQKDV-TQERVHSLEASRVPKRTRSHSADSRAEGASDVENN-EGVTNH 143
           P A E     E    DV T  R HSL ++ + +  R HS D  A     V+      T H
Sbjct: 233 PRAAEASLPNEDVDFDVATSSREHSLHSNWILRAPRRHSEDIAAHTVHTVDGQFRRSTEH 292

Query: 144 TPVNENVELEHSTKVLSENVDNGVGIFTAFLFK 176
             V     LE     L + V+   G F  + FK
Sbjct: 293 RTVGTQRRLERHPIYLPKAVE---GAFNTWKFK 322


>gi|113424170 PREDICTED: similar to hCG28707 [Homo sapiens]
          Length = 486

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 86  PEAPETPKSQEAEQKDV-TQERVHSLEASRVPKRTRSHSADSRAEGASDVENN-EGVTNH 143
           P A E     E    DV T  R HSL ++ + +  R HS D  A     V+      T H
Sbjct: 333 PRAAEASLPNEDVDFDVATSSREHSLHSNWILRAPRRHSEDIAAHTVHTVDGQFRRSTEH 392

Query: 144 TPVNENVELEHSTKVLSENVDNGVGIFTAFLFK 176
             V     LE     L + V+   G F  + FK
Sbjct: 393 RTVGTQRRLERHPIYLPKAVE---GAFNTWKFK 422


>gi|4757836 BRCA1 associated protein-1 [Homo sapiens]
          Length = 729

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 7/68 (10%)

Query: 85  EPEAPETPKSQEA----EQKDVTQERVHSLEASRVPKRTRSHSADSRAEGASDVENNEGV 140
           +PE  +T KSQE+    E K  + +    LEA+R P  +  +  D   E A         
Sbjct: 267 QPELIQTHKSQESQLPEESKSASNKSPLVLEANRAPAASEGNHTDGAEEAAGSCAQ---A 323

Query: 141 TNHTPVNE 148
            +H+P N+
Sbjct: 324 PSHSPPNK 331


>gi|21541824 transducin-like enhancer protein 1 [Homo sapiens]
          Length = 770

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 8/80 (10%)

Query: 53  ISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEA 112
           I KR+V   D + S   + +G  S+ N+V     E P +P++  A        R + ++ 
Sbjct: 224 IKKRKV---DDKDSSHYDSDGDKSDDNLVVDVSNEDPSSPRASPAH-----SPRENGIDK 275

Query: 113 SRVPKRTRSHSADSRAEGAS 132
           +R+ K+  S S  S A  AS
Sbjct: 276 NRLLKKDASSSPASTASSAS 295


>gi|130502162 RAS protein activator like 3 [Homo sapiens]
          Length = 1011

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 39/150 (26%)

Query: 44  LGITKEPSFISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVT 103
           L   ++P F++ R +P H P ISKS     ++  S   A P P+       +   ++   
Sbjct: 761 LSAGEKPGFLAPRDLPKHTPLISKSQSLR-SVRRSESWARPRPD------EERPLRRPRP 813

Query: 104 QERVHSLEASRVPKRTRSHSADSRAEGASDV----------------------------- 134
            +R  S+   R  +R +S     R +G+  +                             
Sbjct: 814 VQRTQSVPVRRPARRRQSAGPWPRPKGSLSMGPAPRARPWTRDSASLPRKPSVPWQRQMD 873

Query: 135 ---ENNEGVTNHTPVNENVELEHSTKVLSE 161
              + N+ +  H PVN+  EL+     L E
Sbjct: 874 QPQDRNQALGTHRPVNKLAELQCEVAALRE 903


>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
            sapiens]
          Length = 3969

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 17/132 (12%)

Query: 87   EAPETPKSQEAEQKDVTQERVHSLEASRVPKRTRSHSADSRAEGASDVENNEGVTNHTPV 146
            E     KS    + +   +  HS+       R ++   DS     S +E++  V   TP 
Sbjct: 2763 EKEHVTKSSVGHKNEPKMDNCHSVS------RVKTQGQDSLEAQLSSLESSRRVHTSTPS 2816

Query: 147  NENVELEHSTKVLSENVDNGVGIFTAFLFKSIEFFIGFIVISVILHFVFQNFPLLFSCLM 206
            ++N+   ++T++L  + DN           +     G I+ S I+ FV +N P + +   
Sbjct: 2817 DKNLLDTYNTELLKSDSDN-----------NNSDDCGNILPSDIMDFVLKNTPSMQALGE 2865

Query: 207  SIRIVDNRLLTL 218
            S     + LL L
Sbjct: 2866 SPESSSSELLNL 2877


>gi|153792012 DNA polymerase zeta [Homo sapiens]
          Length = 3130

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 40   RSDQLGITKEPSFISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQ 99
            ++     T++P  +S +  P  +  IS SLE N A   +  V SP    P TP+S + ++
Sbjct: 1540 KAQNANTTQDP--LSNKHQP--NKNISGSLEHNKANKRTRSVTSPRK--PRTPRSTKQKE 1593

Query: 100  KDVTQERVHSLEASRVPKRTRSHSADS 126
            K     +V SL      +   S S DS
Sbjct: 1594 KIPKLLKVDSLNLQNSSQLDNSVSDDS 1620


>gi|4505507 oligophrenin 1 [Homo sapiens]
          Length = 802

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 27/97 (27%), Positives = 35/97 (36%), Gaps = 9/97 (9%)

Query: 45  GITKEPSFISKRRVP----YHDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQK 100
           G TK PSF  KR  P    +H    + S        E   +  P    P+ P      QK
Sbjct: 697 GPTKTPSFHIKRPAPRPLAHHKEGDADSFSKVRPPGEKPTIIRPPVRPPDPPCRAATPQK 756

Query: 101 -----DVTQERVHSLEASRVPKRTRSHSADSRAEGAS 132
                D+       + +S V  RTR     SR  G+S
Sbjct: 757 PEPKPDIVAGNAGEITSSVVASRTRFFETASRKTGSS 793


>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 77  ESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTRSHSADSRAEGASDVEN 136
           + NVV  P   A E P  ++A+ K ++ E     + SR    T S   D    G   ++ 
Sbjct: 477 DPNVVPGPPKPAKEKPPKKKAQDKILSNEYEEKYDLSR---PTASQLEDELQVGNVPLKK 533

Query: 137 NEGVTNHTPVNENVELEHSTKVLSENVD 164
            +    H  + E  E E   K+ +EN D
Sbjct: 534 AKESKKHEKL-EKPEKEKKKKMKNENAD 560


>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
          Length = 950

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 77  ESNVVASPEPEAPETPKSQEAEQKDVTQERVHSLEASRVPKRTRSHSADSRAEGASDVEN 136
           + NVV  P   A E P  ++A+ K ++ E     + SR    T S   D    G   ++ 
Sbjct: 477 DPNVVPGPPKPAKEKPPKKKAQDKILSNEYEEKYDLSR---PTASQLEDELQVGNVPLKK 533

Query: 137 NEGVTNHTPVNENVELEHSTKVLSENVD 164
            +    H  + E  E E   K+ +EN D
Sbjct: 534 AKESKKHEKL-EKPEKEKKKKMKNENAD 560


>gi|55749621 pleckstrin homology domain containing, family G, member
           3 [Homo sapiens]
          Length = 1163

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 8/99 (8%)

Query: 36  WAGLRSDQLGITKEPSFISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAP---ETP 92
           W G+ S      K P          H+P         GAI+E +  ASPE  +P    +P
Sbjct: 762 WEGMESSGGSPGKGPGQGQANGFDLHEPLFILEEHELGAITEESATASPESSSPTEGRSP 821

Query: 93  KSQEAEQKDVTQERVHSLEASRV-PKRTR----SHSADS 126
                E K++ +E   S +   V P   R    SH  DS
Sbjct: 822 AHLARELKELVKELSSSTQGELVAPLHPRIVQLSHVMDS 860


>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
           sapiens]
          Length = 858

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 14/86 (16%)

Query: 83  SPEPEA-PETPKSQEAEQKDVTQERVHSLEASRVPKRTRSHSADSRAEG--ASDVENNEG 139
           SPE E  PE    +E+++K+  Q++   L+ + +P R+          G   S+ E +EG
Sbjct: 782 SPESETDPEEKAGKESDEKEQEQDKDRELQQAELPNRSPGFGIKKEKTGWDTSESELSEG 841

Query: 140 VTNHTPVNENVELEHSTKVLSENVDN 165
                      ELE   + L + +D+
Sbjct: 842 -----------ELERRRRTLLQQLDD 856


>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
           sapiens]
          Length = 871

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 14/86 (16%)

Query: 83  SPEPEA-PETPKSQEAEQKDVTQERVHSLEASRVPKRTRSHSADSRAEG--ASDVENNEG 139
           SPE E  PE    +E+++K+  Q++   L+ + +P R+          G   S+ E +EG
Sbjct: 795 SPESETDPEEKAGKESDEKEQEQDKDRELQQAELPNRSPGFGIKKEKTGWDTSESELSEG 854

Query: 140 VTNHTPVNENVELEHSTKVLSENVDN 165
                      ELE   + L + +D+
Sbjct: 855 -----------ELERRRRTLLQQLDD 869


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 6/81 (7%)

Query: 49    EPSFISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVH 108
             E +  S  RV   +P++ KS E   A+     V SPEP  P+     E   K    E+V 
Sbjct: 32657 EKAVTSPPRVKSPEPRV-KSPE---AVKSPKRVKSPEPSHPKAVSPTET--KPTPTEKVQ 32710

Query: 109   SLEASRVPKRTRSHSADSRAE 129
              L  S  PK T+   A++  E
Sbjct: 32711 HLPVSAPPKITQFLKAEASKE 32731


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 6/81 (7%)

Query: 49    EPSFISKRRVPYHDPQISKSLEWNGAISESNVVASPEPEAPETPKSQEAEQKDVTQERVH 108
             E +  S  RV   +P++ KS E   A+     V SPEP  P+     E   K    E+V 
Sbjct: 26352 EKAVTSPPRVKSPEPRV-KSPE---AVKSPKRVKSPEPSHPKAVSPTET--KPTPTEKVQ 26405

Query: 109   SLEASRVPKRTRSHSADSRAE 129
              L  S  PK T+   A++  E
Sbjct: 26406 HLPVSAPPKITQFLKAEASKE 26426


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,003,371
Number of Sequences: 37866
Number of extensions: 346599
Number of successful extensions: 2324
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 2230
Number of HSP's gapped (non-prelim): 169
length of query: 222
length of database: 18,247,518
effective HSP length: 98
effective length of query: 124
effective length of database: 14,536,650
effective search space: 1802544600
effective search space used: 1802544600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.