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Search of human proteins with 98986461
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|98986461 neurogenic differentiation 2 [Homo sapiens]
(382 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|98986461 neurogenic differentiation 2 [Homo sapiens] 794 0.0
gi|121114306 neurogenic differentiation 1 [Homo sapiens] 324 7e-89
gi|27475985 neurogenic differentiation 6 [Homo sapiens] 301 5e-82
gi|153792190 neurogenic differentiation 4 [Homo sapiens] 253 2e-67
gi|38455396 neurogenin 1 [Homo sapiens] 89 5e-18
gi|68989258 neurogenin 3 [Homo sapiens] 86 4e-17
gi|31077092 neurogenin 2 [Homo sapiens] 86 4e-17
gi|23097242 nephew of atonal 3 [Homo sapiens] 79 7e-15
gi|57529222 basic helix-loop-helix domain containing, class B, 4... 78 2e-14
gi|226498192 atonal homolog 8 [Homo sapiens] 77 2e-14
gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo... 73 4e-13
gi|4885075 atonal homolog 1 [Homo sapiens] 71 2e-12
gi|21553337 atonal homolog 7 [Homo sapiens] 70 2e-12
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 66 6e-11
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 64 2e-10
gi|28411948 oligodendrocyte transcription factor 3 [Homo sapiens] 62 7e-10
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 61 1e-09
gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens] 60 3e-09
gi|116805332 musculin [Homo sapiens] 59 6e-09
gi|157739932 mesogenin 1 [Homo sapiens] 59 7e-09
gi|148922889 scleraxis homolog B [Homo sapiens] 59 1e-08
gi|17981708 twist homolog 2 [Homo sapiens] 59 1e-08
gi|186972126 scleraxis homolog A [Homo sapiens] 59 1e-08
gi|239756681 PREDICTED: basic helix-loop-helix family, member a9... 58 2e-08
gi|239751178 PREDICTED: basic helix-loop-helix family, member a9... 58 2e-08
gi|239745666 PREDICTED: basic helix-loop-helix family, member a9... 58 2e-08
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 57 2e-08
gi|38202237 transcription factor 21 [Homo sapiens] 57 3e-08
gi|38202239 transcription factor 21 [Homo sapiens] 57 3e-08
gi|116517330 factor in the germline alpha [Homo sapiens] 53 4e-07
>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
Length = 382
Score = 794 bits (2050), Expect = 0.0
Identities = 382/382 (100%), Positives = 382/382 (100%)
Query: 1 MLTRLFSEPGLLSDVPKFASWGDGEDDEPRSDKGDAPPPPPPAPGPGAPGPARAAKPVPL 60
MLTRLFSEPGLLSDVPKFASWGDGEDDEPRSDKGDAPPPPPPAPGPGAPGPARAAKPVPL
Sbjct: 1 MLTRLFSEPGLLSDVPKFASWGDGEDDEPRSDKGDAPPPPPPAPGPGAPGPARAAKPVPL 60
Query: 61 RGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSK 120
RGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSK
Sbjct: 61 RGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSK 120
Query: 121 LRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSG 180
LRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSG
Sbjct: 121 LRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSG 180
Query: 181 KRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYP 240
KRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYP
Sbjct: 181 KRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYP 240
Query: 241 YPCSRLAGAQCQAAGGLGGGAAHALRTHGYCAAYETLYAAAGGGGASPDYNSSEYEGPLS 300
YPCSRLAGAQCQAAGGLGGGAAHALRTHGYCAAYETLYAAAGGGGASPDYNSSEYEGPLS
Sbjct: 241 YPCSRLAGAQCQAAGGLGGGAAHALRTHGYCAAYETLYAAAGGGGASPDYNSSEYEGPLS 300
Query: 301 PPLCLNGNFSLKQDSSPDHEKSYHYSMHYSALPGSRPTGHGLVFGSSAVRGGVHSENLLS 360
PPLCLNGNFSLKQDSSPDHEKSYHYSMHYSALPGSRPTGHGLVFGSSAVRGGVHSENLLS
Sbjct: 301 PPLCLNGNFSLKQDSSPDHEKSYHYSMHYSALPGSRPTGHGLVFGSSAVRGGVHSENLLS 360
Query: 361 YDMHLHHDRGPMYEELNAFFHN 382
YDMHLHHDRGPMYEELNAFFHN
Sbjct: 361 YDMHLHHDRGPMYEELNAFFHN 382
>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
Length = 356
Score = 324 bits (831), Expect = 7e-89
Identities = 181/327 (55%), Positives = 220/327 (67%), Gaps = 17/327 (5%)
Query: 63 EEGTEATLAEVKEEGELGGEEEEE----EEEEEGLDEAEGERPKKRGPKKRKMTKARLER 118
E+ EA AE ++ GGEEE+E EEEEE +E + ++PK+RGPKK+KMTKARLER
Sbjct: 40 EDDLEAMNAE-EDSLRNGGEEEDEDEDLEEEEEEEEEDDDQKPKRRGPKKKKMTKARLER 98
Query: 119 SKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 178
KLRR KANARERNRMH LNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR
Sbjct: 99 FKLRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 158
Query: 179 SGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHP 238
SGK PDLVS+VQTLCKGLSQPTTNLVAGCLQLN R FL EQ D + F +HP
Sbjct: 159 SGKSPDLVSFVQTLCKGLSQPTTNLVAGCLQLNPRTFLPEQNQDMPPHLPTASASFPVHP 218
Query: 239 YPYPCSRLAGAQCQAAGGLGGGAAHALR--THGYCAAYETLYAAAGGGGASPDYNSSEYE 296
Y Y + G G + ++ H Y AA E + + D S ++
Sbjct: 219 YSY---QSPGLPSPPYGTMDSSHVFHVKPPPHAYSAALEPFFES-----PLTDCTSPSFD 270
Query: 297 GPLSPPLCLNGNFSLKQDSSPDHEKSYHYSMHYSALPGSRPTGHGLVF-GSSAVRGGVHS 355
GPLSPPL +NGNFS K + S + EK+Y ++MHY A + HG +F G++A R +
Sbjct: 271 GPLSPPLSINGNFSFKHEPSAEFEKNYAFTMHYPAATLAGAQSHGSIFSGTAAPRCEIPI 330
Query: 356 ENLLSYDMHLHHDRGPMYEELNAFFHN 382
+N++S+D H HH+R M +LNA FH+
Sbjct: 331 DNIMSFDSHSHHER-VMSAQLNAIFHD 356
>gi|27475985 neurogenic differentiation 6 [Homo sapiens]
Length = 337
Score = 301 bits (772), Expect = 5e-82
Identities = 172/333 (51%), Positives = 218/333 (65%), Gaps = 30/333 (9%)
Query: 51 PARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRK 110
P +K + LRG+ A E ++E E EE+ EEE+E GL P++RG +K+K
Sbjct: 34 PESFSKQIVLRGKSIKRAPGEETEKEEE---EEDREEEDENGL-------PRRRGLRKKK 83
Query: 111 MTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYI 170
TK RLER K RRQ+ANARERNRMH LN ALDNLRKVVPCYSKTQKLSKIETLRLAKNYI
Sbjct: 84 TTKLRLERVKFRRQEANARERNRMHGLNDALDNLRKVVPCYSKTQKLSKIETLRLAKNYI 143
Query: 171 WALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGS 230
WALSEILR GKRPDL+++VQ LCKGLSQPTTNLVAGCLQLN+R+FL QG + A H +
Sbjct: 144 WALSEILRIGKRPDLLTFVQNLCKGLSQPTTNLVAGCLQLNARSFLMGQGGEAA---HHT 200
Query: 231 GGPFAMHPYPYPCSRLAGAQCQAAGGLGGGAAHALRTHGYCAAYETLYAAAGGGGASPDY 290
P++ PY L G L + +++ + YC+AYE+ Y + SP+
Sbjct: 201 RSPYSTFYPPYHSPELTTP--PGHGTLDN--SKSMKPYNYCSAYESFYES-----TSPEC 251
Query: 291 NSSEYEGPLS-PPLCLNGNFSLKQDSSPDHEKSYHYSMHYSALPGSRPTGHGLVFGSSAV 349
S ++EGPLS PP+ NG FSLKQ+ + D+ K+Y+Y MHY A+P P G G +F
Sbjct: 252 ASPQFEGPLSPPPINYNGIFSLKQEETLDYGKNYNYGMHYCAVPPRGPLGQGAMF----- 306
Query: 350 RGGVHSENLLSYDMHLHHDRGPMYEELNAFFHN 382
+ +++ YD+HL M +ELNA FHN
Sbjct: 307 --RLPTDSHFPYDLHLRSQSLTMQDELNAVFHN 337
>gi|153792190 neurogenic differentiation 4 [Homo sapiens]
Length = 331
Score = 253 bits (646), Expect = 2e-67
Identities = 152/316 (48%), Positives = 194/316 (61%), Gaps = 25/316 (7%)
Query: 65 GTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSKLRRQ 124
GT L+ + EE + EEEEEEE+ GE+PK+RGPKK+KMTKARLER + RR
Sbjct: 39 GTYGMLSSLTEEHDSIEEEEEEEED--------GEKPKRRGPKKKKMTKARLERFRARRV 90
Query: 125 KANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPD 184
KANARER RMH LN ALDNLR+V+PCYSKTQKLSKIETLRLA+NYIWALSE+L +G+ P+
Sbjct: 91 KANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTPE 150
Query: 185 LVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYPYPCS 244
+V+ LCKGLSQPT+NLVAGCLQL ++ L E+ D + + ++H + Y
Sbjct: 151 GKGFVEMLCKGLSQPTSNLVAGCLQLGPQSVLLEKHEDKSPICDSA---ISVHNFNYQSP 207
Query: 245 RLAGAQCQAAGGLGGGAAHALRTHGYCAAYETLYAAAGGGGASPDYNSSEYEGPLSPPLC 304
L G H L H +++L + G PD ++ YEGPL+PPL
Sbjct: 208 GLPSPP------YGHMETHLL--HLKPQVFKSL-GESSFGSHLPDCSTPPYEGPLTPPLS 258
Query: 305 LNGNFSLKQDSSPDHEKSYHYSMHYSALPGSRPTGHGLVFGSSAVRGGVHSENLLSYDMH 364
++GNFSLKQD SPD EKSY + HY + S H F + R V + +SYD +
Sbjct: 259 ISGNFSLKQDGSPDLEKSYSFMPHYPSSSLSSGHVHSTPFQAGTPRYDVPID--MSYDSY 316
Query: 365 LHHDRGPMYEELNAFF 380
HH G +LN F
Sbjct: 317 PHHGIG---TQLNTVF 329
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 89.4 bits (220), Expect = 5e-18
Identities = 56/148 (37%), Positives = 74/148 (50%), Gaps = 25/148 (16%)
Query: 31 SDKGDAPPPPPPAPGPGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEE 90
+D+ D A G P PAR P + E+ G +++E+E
Sbjct: 27 TDEEDCARLQQAASASGPPAPARRGAP--------------NISRASEVPGAQDDEQE-- 70
Query: 91 EGLDEAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPC 150
R ++RG + + + RR KAN RERNRMH+LNAALD LR V+P
Sbjct: 71 ---------RRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPS 121
Query: 151 YSKTQKLSKIETLRLAKNYIWALSEILR 178
+ KL+KIETLR A NYIWAL+E LR
Sbjct: 122 FPDDTKLTKIETLRFAYNYIWALAETLR 149
>gi|68989258 neurogenin 3 [Homo sapiens]
Length = 214
Score = 86.3 bits (212), Expect = 4e-17
Identities = 47/93 (50%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 87 EEEEEGLDEAEGERPKKRGPKKRKMTKARLERSKL-RRQKANARERNRMHDLNAALDNLR 145
E EE G A + +RG + R ++ L + + RR+KAN RERNRMH+LN+ALD LR
Sbjct: 48 EAEEGGCRGAPRKLRARRGGRSRPKSELALSKQRRSRRKKANDRERNRMHNLNSALDALR 107
Query: 146 KVVPCYSKTQKLSKIETLRLAKNYIWALSEILR 178
V+P + KL+KIETLR A NYIWAL++ LR
Sbjct: 108 GVLPTFPDDAKLTKIETLRFAHNYIWALTQTLR 140
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 86.3 bits (212), Expect = 4e-17
Identities = 60/135 (44%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 46 PGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKK-R 104
PGA G AR + G EA + G G E GL RP + R
Sbjct: 45 PGASGGARR--------QRGAEA--GQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRAR 94
Query: 105 GPKKRKMTKARLER-SKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETL 163
+ T ++R K RR KAN RERNRMH+LNAALD LR+V+P + + KL+KIETL
Sbjct: 95 AVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETL 154
Query: 164 RLAKNYIWALSEILR 178
R A NYIWAL+E LR
Sbjct: 155 RFAHNYIWALTETLR 169
>gi|23097242 nephew of atonal 3 [Homo sapiens]
Length = 166
Score = 79.0 bits (193), Expect = 7e-15
Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 43 APGPGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPK 102
APG PA A + EG +A +E G EEEE E ++G E E E +
Sbjct: 34 APGVSLGDPALALR-------EGRPRRMARFEE----GDPEEEECEVDQGDGEEEEEEER 82
Query: 103 KRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIET 162
RG K + + +RQ AN RER RM +LN A D LR+ VP ++ ++LS+IET
Sbjct: 83 GRGVSLLGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIET 142
Query: 163 LRLAKNYIWALSEILRSGKRPD 184
LRLA YI ++E+L S ++ +
Sbjct: 143 LRLAIVYISFMTELLESCEKKE 164
>gi|57529222 basic helix-loop-helix domain containing, class B, 4
[Homo sapiens]
Length = 225
Score = 77.8 bits (190), Expect = 2e-14
Identities = 59/158 (37%), Positives = 78/158 (49%), Gaps = 25/158 (15%)
Query: 44 PGPGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKK 103
PGPG PA A P + E + GE G+E D+A +R ++
Sbjct: 43 PGPGGDLPAAPAPRAPAQAAESS----------GEQSGDE----------DDAFEQRRRR 82
Query: 104 RGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPC--YSKTQKLSKIE 161
RGP + R + R NARER RMHDLN ALD LR V+P +KLSKI
Sbjct: 83 RGPGSAADGRRRPREQRSLRLSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIA 142
Query: 162 TLRLAKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQP 199
TL LAKNYI ++ L +R LV+++ +GL+ P
Sbjct: 143 TLLLAKNYILMQAQALDEMRR--LVAFLNQ-GQGLAAP 177
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 77.4 bits (189), Expect = 2e-14
Identities = 57/163 (34%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 37 PPPPPPAPGPGAPG---------------------PARAAKPVPLRGEEGTEATL--AEV 73
PPPPPPAP APG PAR A P E+T+ A
Sbjct: 125 PPPPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPAPPESTVRPAPP 184
Query: 74 KEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNR 133
GE D + P+KR + + + RR ANARER R
Sbjct: 185 TRPGESSYSSISHVIYNNHQDSSAS--PRKRPGEATAASSEIKALQQTRRLLANARERTR 242
Query: 134 MHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEI 176
+H ++AA + LRK VPCYS QKLSK+ LR+A NYI +L+ +
Sbjct: 243 VHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARL 285
>gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo
sapiens]
Length = 323
Score = 73.2 bits (178), Expect = 4e-13
Identities = 75/227 (33%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 108 KRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCY--SKTQKLSKIETLRL 165
K++MT+ L++ +L K N+RER RMHDLN A+D LR+V+P +KLSKI TL L
Sbjct: 98 KKQMTEPELQQLRL---KINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLL 154
Query: 166 AKNYIWALSEILRSGKRPDLVSYVQTLCKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAG 225
A+NYI L+ L KR LVS + P + C L L A A
Sbjct: 155 ARNYILMLTNSLEEMKR--LVSEIYGGHHAGFHP-----SACGGLAHSAPLPAATAHPAA 207
Query: 226 RFHGSGGPFAMHPYPYPCSRLAGAQCQAAG-------GLGGGAAHALR-THGYCAAYETL 277
H + P HP P + A A AA G G + ++R HG +
Sbjct: 208 AAHAAHHPAVHHPILPPAAAAAAAAAAAAAVSSASLPGSGLPSVGSIRPPHGLLKSPSAA 267
Query: 278 YAA--AGGGGASPDYNSSEYEGPLSPPLCLNGNFSLKQDSSPDHEKS 322
AA GGGG S ++ G + P S+ Q P H S
Sbjct: 268 AAAPLGGGGGGSGASGGFQHWGGMPCPC------SMCQVPPPHHHVS 308
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 70.9 bits (172), Expect = 2e-12
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 7/85 (8%)
Query: 102 KKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIE 161
++R P +++ + K RR ANARER RMH LN A D LR V+P ++ +KLSK E
Sbjct: 144 RQRAPSSKQVNGVQ----KQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYE 199
Query: 162 TLRLAKNYIWALSEILRS---GKRP 183
TL++A+ YI ALSE+L++ G++P
Sbjct: 200 TLQMAQIYINALSELLQTPSGGEQP 224
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 70.5 bits (171), Expect = 2e-12
Identities = 37/68 (54%), Positives = 47/68 (69%)
Query: 115 RLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALS 174
RLE + RR ANARER RM LN A D LR+VVP + + +KLSK ETL++A +YI AL+
Sbjct: 34 RLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALT 93
Query: 175 EILRSGKR 182
IL +R
Sbjct: 94 RILAEAER 101
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 65.9 bits (159), Expect = 6e-11
Identities = 48/127 (37%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 51 PARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRK 110
P R PV + TEAT E +G L E + R G ++R
Sbjct: 7 PPRRRAPV-----QDTEATPGEGTPDGSLPNPGPEPAKGLRSRPARAAARAPGEGRRRRP 61
Query: 111 MTKA---RLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAK 167
R + S RR ++N RER RMH LN A LR+V+P +KLSKIETL LAK
Sbjct: 62 GPSGPGGRRDSSIQRRLESNERERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAK 121
Query: 168 NYIWALS 174
NYI +L+
Sbjct: 122 NYIKSLT 128
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 63.9 bits (154), Expect = 2e-10
Identities = 56/158 (35%), Positives = 65/158 (41%), Gaps = 12/158 (7%)
Query: 34 GDAPPPPPPAPGPGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGL 93
G A P P G G A L G A V G GG G
Sbjct: 163 GVADPRASPGAGGGGAKAAEGCSNAHLHGG-------ASVPPGGLGGGGGGGSSSGSSGG 215
Query: 94 DEAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPC--Y 151
G +K E+ LR NARER RMHDLN ALD LR V+P
Sbjct: 216 GGGSGSGSGGSSSSSSSSSKKSKEQKALRLN-INARERRRMHDLNDALDELRAVIPYAHS 274
Query: 152 SKTQKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYV 189
+KLSKI TL LAKNYI ++ L +R LV+Y+
Sbjct: 275 PSVRKLSKIATLLLAKNYILMQAQALEEMRR--LVAYL 310
>gi|28411948 oligodendrocyte transcription factor 3 [Homo sapiens]
Length = 272
Score = 62.4 bits (150), Expect = 7e-10
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 102 KKRGPKKRKMTKARLERSKLR--RQKANARERNRMHDLNAALDNLRKVVPCY--SKTQKL 157
K G + K +L L+ R K N RER RMHDLN A+D LR+V+P +KL
Sbjct: 62 KAAGESSKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKL 121
Query: 158 SKIETLRLAKNYIWALSEILRSGKR 182
SKI TL LA+NYI L+ L KR
Sbjct: 122 SKIATLLLARNYILMLTSSLEEMKR 146
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 61.2 bits (147), Expect = 1e-09
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 82 EEEEEEEEEEGLDEA----EGERPKKRGPKKRKMTKARLERSK------LRRQKANARER 131
E+EE E + D++ EG +RGP +A +RQ ANARER
Sbjct: 23 EDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGGGAGPVVVVRQRQAANARER 82
Query: 132 NRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGKRPD 184
+R +N A LR ++P +KLSKIETLRLA +YI L+ +L G D
Sbjct: 83 DRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDSAD 135
>gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens]
Length = 271
Score = 60.1 bits (144), Expect = 3e-09
Identities = 62/187 (33%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 82 EEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAAL 141
E+ E E G G P G R A+ E+ + R+K N+RER RM DLN A+
Sbjct: 71 EKPEAPAEPPGPGPGSGAHP---GGSARP--DAKEEQQQQLRRKINSRERKRMQDLNLAM 125
Query: 142 DNLRKVVPCYSKT-------QKLSKIETLRLAKNYIWALSEILRSGKRPDLVSYVQTLCK 194
D LR+V+ YS +KLSKI TL LA+NYI L L+ +R L +
Sbjct: 126 DALREVILPYSAAHCQGAPGRKLSKIATLLLARNYILLLGSSLQELRR--------ALGE 177
Query: 195 GLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGPFAMHPYPYPCSRLAGAQCQAA 254
G L+ L L + + A GA G P A+ P Y L C
Sbjct: 178 GAGPAAPRLLLAGLPLLAAAPGSVLLAPGA-----VGPPDALRPAKYLSLALDEPPCGQF 232
Query: 255 GGLGGGA 261
GGGA
Sbjct: 233 ALPGGGA 239
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 59.3 bits (142), Expect = 6e-09
Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 51 PARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEG---ERPKKRG-- 105
P A+K PLRG E + A+ ++ E + EEE AEG +RP+ G
Sbjct: 22 PVPASKRPPLRGVERSYASPSDNSSAEEEDPDGEEERCALGTAGSAEGCKRKRPRVAGGG 81
Query: 106 ------------PKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSK 153
P K + A ++S+ R ANARER RM L+ A L+ +P
Sbjct: 82 GAGGSAGGGGKKPLPAKGSAAECKQSQ--RNAANARERARMRVLSKAFSRLKTSLPWVPP 139
Query: 154 TQKLSKIETLRLAKNYIWALSEILRSGK 181
KLSK++TLRLA +YI L ++L+ +
Sbjct: 140 DTKLSKLDTLRLASSYIAHLRQLLQEDR 167
>gi|157739932 mesogenin 1 [Homo sapiens]
Length = 193
Score = 58.9 bits (141), Expect = 7e-09
Identities = 62/190 (32%), Positives = 83/190 (43%), Gaps = 17/190 (8%)
Query: 3 TRLFSEPGL-LSDVPKFASWGDGEDDEPRSDKGDAPPPPPPAPGPG------APGPARAA 55
T L E GL SD P S D +D + A P +P P +P PA A
Sbjct: 7 TFLSLEDGLGSSDSPGLLSSWDWKDRAGPFELNQASPSQSLSPAPSLESYSSSPCPAVAG 66
Query: 56 KPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPKKRGPKKRKMTKAR 115
P G + E +GG E + L GPK +K TK R
Sbjct: 67 LPCEHGGASSGGS------EGCSVGGASGLVEVDYNMLAFQPTHLQGGGGPKAQKGTKVR 120
Query: 116 LERSKLRRQKANARERNRMHDLNAALDNLRKVV-PCYS-KTQKLSKIETLRLAKNYIWAL 173
+ S RR+KA+ RE+ RM L AL LR + P YS + Q L+KI+TL+ YI L
Sbjct: 121 M--SVQRRRKASEREKLRMRTLADALHTLRNYLPPVYSQRGQPLTKIQTLKYTIKYIGEL 178
Query: 174 SEILRSGKRP 183
+++L G+ P
Sbjct: 179 TDLLNRGREP 188
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 58.5 bits (140), Expect = 1e-08
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 82 EEEEEEEEEEGLDE----AEGERPKKRGPKKRKMTK--------ARLERSKLRRQKANAR 129
E+E+ + G DE R +G ++R + R R +R ANAR
Sbjct: 24 EDEDRGSDSSGSDEKPCRVHAARCGLQGARRRAGGRRAGGGGPGGRPGREPRQRHTANAR 83
Query: 130 ERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGK 181
ER+R + +N A LR ++P +KLSKIETLRLA +YI L +L +G+
Sbjct: 84 ERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGE 135
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 58.5 bits (140), Expect = 1e-08
Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 63 EEGTEATLAEVKEEGELGGEEEEEEEEEEGL----------DEAEGERPKKRGPKKRKMT 112
EEG+ + ++ V LG EEE E + + E P KRG KK +
Sbjct: 2 EEGSSSPVSPVDS---LGTSEEELERQPKRFGRKRRYSKKSSEDGSPTPGKRG-KKGSPS 57
Query: 113 KARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWA 172
E + +R AN RER R LN A LRK++P + KLSKI+TL+LA YI
Sbjct: 58 AQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTL-PSDKLSKIQTLKLAARYIDF 116
Query: 173 LSEILRS 179
L ++L+S
Sbjct: 117 LYQVLQS 123
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 58.5 bits (140), Expect = 1e-08
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 82 EEEEEEEEEEGLDE----AEGERPKKRGPKKRKMTK--------ARLERSKLRRQKANAR 129
E+E+ + G DE R +G ++R + R R +R ANAR
Sbjct: 24 EDEDRGSDSSGSDEKPCRVHAARCGLQGARRRAGGRRAGGGGPGGRPGREPRQRHTANAR 83
Query: 130 ERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGK 181
ER+R + +N A LR ++P +KLSKIETLRLA +YI L +L +G+
Sbjct: 84 ERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGE 135
>gi|239756681 PREDICTED: basic helix-loop-helix family, member a9
[Homo sapiens]
Length = 203
Score = 57.8 bits (138), Expect = 2e-08
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 60 LRGEEGTEATLAEVKEEG--ELGGEEEEEEEEEE--GLDEAEGERPKKRGPKKRKMTKAR 115
LRG G T + E+ +LGG E + G + A R + P R+ +AR
Sbjct: 2 LRGAPGLGLTARKGAEDSAEDLGGPCPEPGGDSGVLGANGASCSRGEAEEPAGRR--RAR 59
Query: 116 LERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSE 175
RSK RR AN RER R+ D N A + LR+ + ++LSKI TLR A + I ALS
Sbjct: 60 PVRSKARRMAANVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRAIHRIAALSL 119
Query: 176 ILRSGKRP 183
+LR+ P
Sbjct: 120 VLRASPAP 127
>gi|239751178 PREDICTED: basic helix-loop-helix family, member a9
[Homo sapiens]
Length = 235
Score = 57.8 bits (138), Expect = 2e-08
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 60 LRGEEGTEATLAEVKEEG--ELGGEEEEEEEEEE--GLDEAEGERPKKRGPKKRKMTKAR 115
LRG G T + E+ +LGG E + G + A R + P R+ +AR
Sbjct: 2 LRGAPGLGLTARKGAEDSAEDLGGPCPEPGGDSGVLGANGASCSRGEAEEPAGRR--RAR 59
Query: 116 LERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSE 175
RSK RR AN RER R+ D N A + LR+ + ++LSKI TLR A + I ALS
Sbjct: 60 PVRSKARRMAANVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRAIHRIAALSL 119
Query: 176 ILRSGKRP 183
+LR+ P
Sbjct: 120 VLRASPAP 127
>gi|239745666 PREDICTED: basic helix-loop-helix family, member a9
[Homo sapiens]
Length = 235
Score = 57.8 bits (138), Expect = 2e-08
Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 60 LRGEEGTEATLAEVKEEG--ELGGEEEEEEEEEE--GLDEAEGERPKKRGPKKRKMTKAR 115
LRG G T + E+ +LGG E + G + A R + P R+ +AR
Sbjct: 2 LRGAPGLGLTARKGAEDSAEDLGGPCPEPGGDSGVLGANGASCSRGEAEEPAGRR--RAR 59
Query: 116 LERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSE 175
RSK RR AN RER R+ D N A + LR+ + ++LSKI TLR A + I ALS
Sbjct: 60 PVRSKARRMAANVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRAIHRIAALSL 119
Query: 176 ILRSGKRP 183
+LR+ P
Sbjct: 120 VLRASPAP 127
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 57.4 bits (137), Expect = 2e-08
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 107 KKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIETLRLA 166
++R+ ++ E +LR Q AN RER RM +N A + LR +P ++LSK++TLRLA
Sbjct: 150 RRRRRVRSEAELQQLR-QAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLA 208
Query: 167 KNYIWALSEILRS 179
YI LSE++++
Sbjct: 209 IGYINFLSELVQA 221
>gi|38202237 transcription factor 21 [Homo sapiens]
Length = 179
Score = 57.0 bits (136), Expect = 3e-08
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 87 EEEEEGLDEAEGERPKKRG---------PKKRKMTKARLERSKLRRQKANARERNRMHDL 137
E EE + G K RG KK ++ E +++R ANARER RM L
Sbjct: 36 ESTEESSNCENGSPQKGRGGLGKRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVL 95
Query: 138 NAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGK 181
+ A L+ +P KLSK++TLRLA +YI L +IL + K
Sbjct: 96 SKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDK 139
>gi|38202239 transcription factor 21 [Homo sapiens]
Length = 179
Score = 57.0 bits (136), Expect = 3e-08
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 87 EEEEEGLDEAEGERPKKRG---------PKKRKMTKARLERSKLRRQKANARERNRMHDL 137
E EE + G K RG KK ++ E +++R ANARER RM L
Sbjct: 36 ESTEESSNCENGSPQKGRGGLGKRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVL 95
Query: 138 NAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGK 181
+ A L+ +P KLSK++TLRLA +YI L +IL + K
Sbjct: 96 SKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDK 139
>gi|116517330 factor in the germline alpha [Homo sapiens]
Length = 219
Score = 53.1 bits (126), Expect = 4e-07
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 85 EEEEEEEGLDEAEGERPK-------KRGPKKRKMTKARLERSKLRRQKANARERNRMHDL 137
+ E E+ L E G P+ KR P + L+ RR+ ANA+ER R+ +L
Sbjct: 22 QAEVLEDVLREQFGPLPQLAAVCRLKRLPSGGYSSTENLQLVLERRRVANAKERERIKNL 81
Query: 138 NAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRSGK-----RPDLVSYVQTL 192
N L+ +VP +++K SK++ L+ A YI LS++L K PD SY
Sbjct: 82 NRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVLSDLLEGAKDSKKQDPDEQSYSNNS 141
Query: 193 CKGLSQPTTNLVAGCLQLNSRNFLTEQGADGAGRFHGSGGP 233
+ + L Q S F + +G GSG P
Sbjct: 142 SESHTSSARQLSRNITQHISCAFGLKNEEEGPWADGGSGEP 182
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,756,118
Number of Sequences: 37866
Number of extensions: 1263292
Number of successful extensions: 33120
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 972
Number of HSP's that attempted gapping in prelim test: 15543
Number of HSP's gapped (non-prelim): 11849
length of query: 382
length of database: 18,247,518
effective HSP length: 104
effective length of query: 278
effective length of database: 14,309,454
effective search space: 3978028212
effective search space used: 3978028212
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.