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Search of human proteins with 96975097
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens] 412 e-116
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa... 384 e-107
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa... 380 e-106
gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens] 346 9e-96
gi|117938299 RAB6C-like [Homo sapiens] 345 2e-95
gi|74096429 RAB41, member RAS oncogene family [Homo sapiens] 260 5e-70
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens] 169 2e-42
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa... 169 2e-42
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa... 169 2e-42
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens] 160 5e-40
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 151 4e-37
gi|50234889 RAB43 protein [Homo sapiens] 150 7e-37
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 149 2e-36
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 148 4e-36
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens] 147 5e-36
gi|16933567 mel transforming oncogene [Homo sapiens] 147 5e-36
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens] 147 5e-36
gi|33589861 RAB31, member RAS oncogene family [Homo sapiens] 147 8e-36
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 145 2e-35
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens] 145 2e-35
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 145 3e-35
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 144 5e-35
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 144 7e-35
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 143 9e-35
gi|10190714 RAS-related protein RAB-22A [Homo sapiens] 142 2e-34
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens] 142 2e-34
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 142 3e-34
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 141 4e-34
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 141 4e-34
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 141 4e-34
>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
Length = 208
Score = 412 bits (1060), Expect = e-116
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI 120
TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI
Sbjct: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI 120
Query: 121 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV 180
IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV
Sbjct: 121 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV 180
Query: 181 QEKSKEGMIDIKLDKPQEPPASEGGCSC 208
QEKSKEGMIDIKLDKPQEPPASEGGCSC
Sbjct: 181 QEKSKEGMIDIKLDKPQEPPASEGGCSC 208
>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
sapiens]
Length = 208
Score = 384 bits (986), Expect = e-107
Identities = 189/208 (90%), Positives = 202/208 (97%)
Query: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
MS GGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
Sbjct: 1 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI 120
TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITN+NSFQQT+KWIDDVRTERGSDVI
Sbjct: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 121 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV 180
IMLVGNKTDLADKRQ++IEEGE++AKEL+VMFIETSAK GYNVKQLFRRVA+ALPGME+
Sbjct: 121 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST 180
Query: 181 QEKSKEGMIDIKLDKPQEPPASEGGCSC 208
Q++S+E MIDIKL+KPQE P SEGGCSC
Sbjct: 181 QDRSREDMIDIKLEKPQEQPVSEGGCSC 208
>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
sapiens]
Length = 208
Score = 380 bits (976), Expect = e-106
Identities = 186/208 (89%), Positives = 200/208 (96%)
Query: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
MS GGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
Sbjct: 1 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
Query: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI 120
T+RLQLWDTAGQERFRSLIPSYIRDS AVVVYDITN+NSFQQT+KWIDDVRTERGSDVI
Sbjct: 61 TIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 121 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV 180
IMLVGNKTDLADKRQ++IEEGE++AKEL+VMFIETSAK GYNVKQLFRRVA+ALPGME+
Sbjct: 121 IMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMEST 180
Query: 181 QEKSKEGMIDIKLDKPQEPPASEGGCSC 208
Q++S+E MIDIKL+KPQE P SEGGCSC
Sbjct: 181 QDRSREDMIDIKLEKPQEQPVSEGGCSC 208
>gi|116875763 RAB6C, member RAS oncogene family [Homo sapiens]
Length = 254
Score = 346 bits (887), Expect = 9e-96
Identities = 171/208 (82%), Positives = 187/208 (89%)
Query: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
MSAGGDFGNPLRKFKLVFLGEQSV KTSLITRF YDSFDNTYQA IGIDFLSKTMYLED
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG 60
Query: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI 120
T+ L+LWDTAGQER RSLIP YIRDS AVVVYDITN+NSFQQT+KWIDDVRTERGSDVI
Sbjct: 61 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVI 120
Query: 121 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV 180
I LVGN+TDLADKRQ+++EEGE++AK L+V FIET AK GYNVKQLFRRVA+ALPGME+
Sbjct: 121 ITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST 180
Query: 181 QEKSKEGMIDIKLDKPQEPPASEGGCSC 208
Q+ S+E M DIKL+KPQE SEGGCSC
Sbjct: 181 QDGSREDMSDIKLEKPQEQTVSEGGCSC 208
>gi|117938299 RAB6C-like [Homo sapiens]
Length = 254
Score = 345 bits (884), Expect = 2e-95
Identities = 172/208 (82%), Positives = 186/208 (89%)
Query: 1 MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR 60
MSAGGDFGNPLRKFKLVFLGEQSV KTSLITRF YDSFDNTYQA IGIDFLSKTMYLED
Sbjct: 1 MSAGGDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDG 60
Query: 61 TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVI 120
T+ L+LWDTAGQER RSLIP YIRDS AVVVYDITN+NSFQQT+KWIDDVRTE GSDVI
Sbjct: 61 TIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTEGGSDVI 120
Query: 121 IMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENV 180
I LVGNKTDLADKRQ++IEEGE++AK L+V FIET AK GYNVKQLFRRVA+ALPGME+
Sbjct: 121 ITLVGNKTDLADKRQVSIEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMEST 180
Query: 181 QEKSKEGMIDIKLDKPQEPPASEGGCSC 208
Q+ S+E M DIKL+KPQE SEGGCSC
Sbjct: 181 QDGSREDMSDIKLEKPQEQTVSEGGCSC 208
>gi|74096429 RAB41, member RAS oncogene family [Homo sapiens]
Length = 222
Score = 260 bits (665), Expect = 5e-70
Identities = 130/188 (69%), Positives = 159/188 (84%), Gaps = 1/188 (0%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
L K KL+FLGEQSVGKTS+I+RFMY+SF QAT+GIDFLSKTMYLED+ V+LQLWDTA
Sbjct: 29 LCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTA 88
Query: 71 GQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDL 130
GQERF SLIPSYIRDST+AVVVYDITN+NSF++T KW++ VR ERG DV+IML+GNK DL
Sbjct: 89 GQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDL 148
Query: 131 ADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMID 190
+KRQ+T E+GE++++ L+VMFIETSAKTGYNVK+LFRRVASAL KEG ++
Sbjct: 149 DNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLS-TRTSPPPKEGTVE 207
Query: 191 IKLDKPQE 198
I+L+ +E
Sbjct: 208 IELESFEE 215
>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 169 bits (428), Expect = 2e-42
Identities = 85/202 (42%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 4 GGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR 63
G + GN + +FKLV LGE +VGK+SL+ RF+ F ++TIG FL++T+ L+D TV+
Sbjct: 11 GPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVK 70
Query: 64 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIML 123
++WDTAGQER+ SL P Y R + A+VVYDITN SF + W+ +++ + +++I L
Sbjct: 71 FEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIAL 130
Query: 124 VGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGME--NVQ 181
GNK DLA+KR + +E + A + S++F+ETSAKT NV ++F +A LP E N
Sbjct: 131 SGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPG 190
Query: 182 EKSKEGMIDIKLDKPQEPPASE 203
S G + L +P +P ++
Sbjct: 191 ANSARGR-GVDLTEPTQPTRNQ 211
>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
sapiens]
Length = 216
Score = 169 bits (427), Expect = 2e-42
Identities = 83/199 (41%), Positives = 125/199 (62%), Gaps = 1/199 (0%)
Query: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
GN + +FKLV LGE +VGK+SL+ RF+ F ++TIG FL++T+ L+D TV+ ++W
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 127
DTAGQER+ SL P Y R + A+VVYDITN ++F + W+ +++ + +++I L GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 128 TDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEG 187
DLA KR + +E + A + S++F+ETSAKT NV ++F +A LP E G
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPG 195
Query: 188 MIDIKLDKPQEPPASEGGC 206
+ +D + PAS C
Sbjct: 196 R-NRGVDLQENNPASRSQC 213
>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
sapiens]
Length = 216
Score = 169 bits (427), Expect = 2e-42
Identities = 83/199 (41%), Positives = 125/199 (62%), Gaps = 1/199 (0%)
Query: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 67
GN + +FKLV LGE +VGK+SL+ RF+ F ++TIG FL++T+ L+D TV+ ++W
Sbjct: 16 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIW 75
Query: 68 DTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 127
DTAGQER+ SL P Y R + A+VVYDITN ++F + W+ +++ + +++I L GNK
Sbjct: 76 DTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNK 135
Query: 128 TDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEG 187
DLA KR + +E + A + S++F+ETSAKT NV ++F +A LP E G
Sbjct: 136 ADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPG 195
Query: 188 MIDIKLDKPQEPPASEGGC 206
+ +D + PAS C
Sbjct: 196 R-NRGVDLQENNPASRSQC 213
>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
Length = 215
Score = 160 bits (406), Expect = 5e-40
Identities = 76/166 (45%), Positives = 111/166 (66%)
Query: 13 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
+FKLV LGE +VGK+SL+ RF+ F ++TIG FL++++ L+D TV+ ++WDTAGQ
Sbjct: 20 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 79
Query: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
ER+ SL P Y R + A+VVYDITN +F + W+ +++ + ++I L GNK DLA+
Sbjct: 80 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLAN 139
Query: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGME 178
KR + EE + A + S++F+ETSAKT NV LF +A LP E
Sbjct: 140 KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 151 bits (381), Expect = 4e-37
Identities = 72/158 (45%), Positives = 108/158 (68%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G+ VGKT L+ RF D+F+ T+ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
RFR++ +Y R + ++VYDITN SF WI ++ SDV M++GNK D+ DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDK 128
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVA 171
RQ++ E GE+ A + + F+ETSAK+ NV++ F +A
Sbjct: 129 RQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLA 166
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 150 bits (379), Expect = 7e-37
Identities = 72/162 (44%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKLV +G+ SVGKT ++ RF +F +TIG+DF KT+ ++ + V+LQ+WDTAGQE
Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 78
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
RFR++ SY R + A++ YDIT +SF WI+DVR GS+++ +L+GNK+DL++
Sbjct: 79 RFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSEL 138
Query: 134 RQITIEEGEQRAKELSVM-FIETSAKTGYNVKQLFRRVASAL 174
R++++ E + A+ ++ IETSAK NV++ F RVA+ L
Sbjct: 139 REVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 149 bits (375), Expect = 2e-36
Identities = 71/178 (39%), Positives = 116/178 (65%), Gaps = 6/178 (3%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FK + +G+ VGK+ L+ +F F + TIG++F ++ + ++ + ++LQ+WDTAGQE
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
FRS+ SY R + A++VYDIT ++F + W++D R S+++IML+GNK+DL +
Sbjct: 67 SFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 126
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDI 191
R++ EEGE A+E ++F+ETSAKT NV++ F A + + EK +EG+ DI
Sbjct: 127 REVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTA------KEIYEKIQEGVFDI 178
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 148 bits (373), Expect = 4e-36
Identities = 74/175 (42%), Positives = 112/175 (64%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G+ VGKT ++ RF D+F+ T+ +TIGIDF KT+ L+ + ++LQ+WDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
RF ++ SY R + ++VYDITN SF+ SKW+ ++ DV ML+GNK D+ DK
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGM 188
R + +G Q A+E + F ETSAK N+++ F +A + V+E + E +
Sbjct: 130 RVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV 184
>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
Length = 227
Score = 147 bits (372), Expect = 5e-36
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 2/197 (1%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G SVGKTS + R+ DSF + + +T+GIDF KT++ ++ ++LQ+WDTAGQE
Sbjct: 31 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQE 90
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
R+R++ +Y R + +++YDITN SF W ++T + ++LVGNK D+ D+
Sbjct: 91 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDE 150
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL 193
R I+ E G+ ++L F ETSAK NVKQ F R+ + + ++ + K
Sbjct: 151 RVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQ 210
Query: 194 DK--PQEPPASEGGCSC 208
+ + PP + C+C
Sbjct: 211 NTRLKETPPPPQPNCAC 227
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 147 bits (372), Expect = 5e-36
Identities = 70/158 (44%), Positives = 107/158 (67%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G+ VGKT ++ RF D+F++T+ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
RFR++ +Y R + ++VYDITN SF WI ++ +DV M++GNK D+ DK
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDK 128
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVA 171
RQ++ E GE+ A + + F+ETSAK NV+ F +A
Sbjct: 129 RQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA 166
>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 147 bits (372), Expect = 5e-36
Identities = 77/200 (38%), Positives = 112/200 (56%), Gaps = 8/200 (4%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G SVGKTS + R+ DSF + +T+GIDF KT+Y D+ ++LQ+WDTAGQE
Sbjct: 23 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQE 82
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
R+R++ +Y R + +++YDI N SF W ++T + ++LVGNK DL D+
Sbjct: 83 RYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDE 142
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL-----PGMENVQEKSKEGM 188
R + E+G + A +L F E SAK NVKQ+F R+ + +E G
Sbjct: 143 RVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLEPSSSSGSNGK 202
Query: 189 IDIKLDKPQEPPASEGGCSC 208
D P P+S CSC
Sbjct: 203 GPAVGDAPAPQPSS---CSC 219
>gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
Length = 195
Score = 147 bits (370), Expect = 8e-36
Identities = 68/186 (36%), Positives = 117/186 (62%), Gaps = 3/186 (1%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
+R+ K+ LG+ VGK+S++ RF+ D FD+ TIG F++KT+ + + +WDTA
Sbjct: 4 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 63
Query: 71 GQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDL 130
GQERF SL P Y R S AV+VYDIT +SF KW+ +++ ++++ + GNK DL
Sbjct: 64 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDL 123
Query: 131 ADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMID 190
+D R++ +++ ++ A+ + + +ETSAK N+++LF+ ++ +P ++ E G
Sbjct: 124 SDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLD-PHENGNNG--T 180
Query: 191 IKLDKP 196
IK++KP
Sbjct: 181 IKVEKP 186
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 145 bits (367), Expect = 2e-35
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 2/173 (1%)
Query: 3 AGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSF-DNTYQATIGIDFLSKTMYLEDRT 61
AG DF + + K + +G+ VGKTSL+ +F F ++ AT+GI F +K + ++
Sbjct: 13 AGPDFNDHVLH-KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVR 71
Query: 62 VRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVII 121
V+LQ+WDTAGQERFRS+ +Y RD+ +++YDITN +SF W+ ++ DV+I
Sbjct: 72 VKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVI 131
Query: 122 MLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
ML+GNK D++ +R I E+GE A+E V F+ETSAKTG NV+ F +A L
Sbjct: 132 MLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 184
>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
Length = 220
Score = 145 bits (366), Expect = 2e-35
Identities = 68/161 (42%), Positives = 100/161 (62%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FK++ +G SVGKTS + R+ DSF + +T+GIDF KT+Y D+ ++LQ+WDTAGQE
Sbjct: 23 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 82
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
R+R++ +Y R + +++YDITN SF W ++T + ++LVGNK D+ D+
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDE 142
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
R ++ E G Q A L F E SAK NVKQ F R+ +
Sbjct: 143 RVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVI 183
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 145 bits (365), Expect = 3e-35
Identities = 68/178 (38%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FK + +G+ VGK+ L+ +F F + TIG++F ++ + ++ + ++LQ+WDTAGQE
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 66
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
FRS+ SY R + A++VYDIT +F + W++D R S+++IML+GNK+DL +
Sbjct: 67 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESR 126
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDI 191
R + EEGE A+E ++F+ETSAKT NV++ F A + + K ++G+ D+
Sbjct: 127 RDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTA------KEIYRKIQQGLFDV 178
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 144 bits (363), Expect = 5e-35
Identities = 72/161 (44%), Positives = 106/161 (65%), Gaps = 1/161 (0%)
Query: 15 KLVFLGEQSVGKTSLITRFMYDSF-DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
K++ LG+ VGKT + +F +F T+ AT+GIDF +K + ++ V+LQ+WDTAGQE
Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
RFRS+ +Y RD+ +++YDITN +SF W+ ++ DV+IML+GNK D++ +
Sbjct: 91 RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE 150
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
R I E+GE A+E V F+ETSAKTG NV+ F +A L
Sbjct: 151 RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 144 bits (362), Expect = 7e-35
Identities = 67/158 (42%), Positives = 106/158 (67%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G+ VGKT LI RF D+F+NTY +TIGIDF +T+ +E + ++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
RF+++ +Y R + ++VYDIT+ SF+ W+ ++ + V +L+GNK D+ K
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 128
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVA 171
R++ E+ ++ A+E + F ETSAK+ NV + F +A
Sbjct: 129 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLA 166
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 143 bits (361), Expect = 9e-35
Identities = 71/193 (36%), Positives = 115/193 (59%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G+ VGK+ L+ RF D++ +Y +TIG+DF +T+ L+ +T++LQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
RFR++ SY R + +VVYD+T+ S+ +W+ ++ +V +LVGNK+DL K
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTK 128
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL 193
+ + ++ A L + F+ETSAK NV+Q F +A+ + S ++K+
Sbjct: 129 KVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKI 188
Query: 194 DKPQEPPASEGGC 206
D PA G C
Sbjct: 189 DSTPVKPAGGGCC 201
>gi|10190714 RAS-related protein RAB-22A [Homo sapiens]
Length = 194
Score = 142 bits (359), Expect = 2e-34
Identities = 70/193 (36%), Positives = 111/193 (57%), Gaps = 4/193 (2%)
Query: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70
LR+ K+ LG+ VGK+S++ RF+ DSFD TIG F++KT+ ++ + +WDTA
Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62
Query: 71 GQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDL 130
GQERFR+L P Y R S A++VYDIT +F W+ ++R ++++ + GNK DL
Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDL 122
Query: 131 ADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMID 190
D R++ + + A + +F+ETSAK N+ +LF ++ +P + +G
Sbjct: 123 IDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANLPSGGKG--- 179
Query: 191 IKLDK-PQEPPAS 202
KL + P EP S
Sbjct: 180 FKLRRQPSEPKRS 192
>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 142 bits (358), Expect = 2e-34
Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 2/197 (1%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G SVGKTS + R+ D+F + +T+GIDF KT+Y ++ V+LQ+WDTAGQE
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQE 82
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
R+R++ +Y R + +++YDITN SF W ++T + ++LVGNK D+ ++
Sbjct: 83 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEE 142
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKL 193
R + E+G+ A++L F E SAK +V+Q F R+ A+ + + M+
Sbjct: 143 RVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSMLGSSK 202
Query: 194 DK--PQEPPASEGGCSC 208
+ PP + CSC
Sbjct: 203 NTRLSDTPPLLQQNCSC 219
>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 142 bits (357), Expect = 3e-34
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSF-DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 72
FK++ +G+ VGKT L+ RF +F T+ +T+GIDF +K + ++ V+LQ+WDTAGQ
Sbjct: 64 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 123
Query: 73 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 132
ERFRS+ +Y RD+ +++YD+TN SF W+ ++ DV +ML+GNK D A
Sbjct: 124 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAH 183
Query: 133 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 174
+R + E+GE+ AKE + F+ETSAKTG NV F +A L
Sbjct: 184 ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 225
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 141 bits (355), Expect = 4e-34
Identities = 66/158 (41%), Positives = 104/158 (65%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G+ VGKT LI RF D+F+NTY +TIGIDF +T+ +E + ++LQ+WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
RF+++ +Y R + ++ YDIT+ SF+ W+ + + V +L+GNK D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVA 171
R++ E+ ++ A+E + F ETSAK+ NV + F +A
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLA 290
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 141 bits (355), Expect = 4e-34
Identities = 66/158 (41%), Positives = 104/158 (65%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G+ VGKT LI RF D+F+NTY +TIGIDF +T+ +E + ++LQ+WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
RF+++ +Y R + ++ YDIT+ SF+ W+ + + V +L+GNK D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVA 171
R++ E+ ++ A+E + F ETSAK+ NV + F +A
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLA 290
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 141 bits (355), Expect = 4e-34
Identities = 66/158 (41%), Positives = 104/158 (65%)
Query: 14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73
FKL+ +G+ VGKT LI RF D+F+NTY +TIGIDF +T+ +E + ++LQ+WDTAGQE
Sbjct: 133 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 192
Query: 74 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 133
RF+++ +Y R + ++ YDIT+ SF+ W+ + + V +L+GNK D+ K
Sbjct: 193 RFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCDMEAK 252
Query: 134 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVA 171
R++ E+ ++ A+E + F ETSAK+ NV + F +A
Sbjct: 253 RKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLA 290
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,822,223
Number of Sequences: 37866
Number of extensions: 238576
Number of successful extensions: 1076
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 703
Number of HSP's gapped (non-prelim): 248
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.