Search of human proteins with 9665259

Search of human proteins with 9665259

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|9665259 microfibrillar-associated protein 2 isoform a
precursor [Homo sapiens]
         (183 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505157 microfibrillar-associated protein 2 isoform a precurs...   392   e-109
gi|9665259 microfibrillar-associated protein 2 isoform a precurs...   392   e-109
gi|207028935 microfibrillar-associated protein 2 isoform b precu...   385   e-108
gi|207028905 microfibrillar-associated protein 2 isoform b precu...   385   e-108
gi|4505089 microfibrillar associated protein 5 [Homo sapiens]          87   1e-17
gi|118600967 shroom family member 4 [Homo sapiens]                     36   0.016
gi|122937283 6720455I24Rik homolog [Homo sapiens]                      35   0.028
gi|116805330 small conductance calcium-activated potassium chann...    33   0.18 
gi|54792138 helicase with zinc finger domain [Homo sapiens]            32   0.30 
gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]     32   0.40 
gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]     32   0.40 
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    32   0.40 
gi|150170670 piccolo isoform 2 [Homo sapiens]                          31   0.52 
gi|150378539 piccolo isoform 1 [Homo sapiens]                          31   0.52 
gi|221139761 zinc finger protein 853 [Homo sapiens]                    31   0.68 
gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]       31   0.68 
gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens]       31   0.68 
gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]       31   0.68 
gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens]       31   0.68 
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo...    31   0.68 
gi|38348304 von Willebrand factor A domain containing 2 [Homo sa...    31   0.68 
gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled...    30   0.89 
gi|90903231 huntingtin [Homo sapiens]                                  30   0.89 
gi|196114999 special AT-rich sequence binding protein 1 [Homo sa...    30   0.89 
gi|4506791 special AT-rich sequence binding protein 1 [Homo sapi...    30   0.89 
gi|93141033 PAX interacting protein 1 [Homo sapiens]                   30   0.89 
gi|221316616 extracellular matrix protein 1 isoform 2 precursor ...    30   1.2  
gi|221316614 extracellular matrix protein 1 isoform 1 precursor ...    30   1.2  
gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens]     30   1.2  
gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]       30   1.2  

>gi|4505157 microfibrillar-associated protein 2 isoform a precursor
           [Homo sapiens]
          Length = 183

 Score =  392 bits (1006), Expect = e-109
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 60
           MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE
Sbjct: 1   MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 60

Query: 61  QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 120
           QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE
Sbjct: 61  QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 120

Query: 121 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 180
           VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC
Sbjct: 121 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 180

Query: 181 GSC 183
           GSC
Sbjct: 181 GSC 183


>gi|9665259 microfibrillar-associated protein 2 isoform a precursor
           [Homo sapiens]
          Length = 183

 Score =  392 bits (1006), Expect = e-109
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 60
           MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE
Sbjct: 1   MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 60

Query: 61  QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 120
           QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE
Sbjct: 61  QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 120

Query: 121 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 180
           VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC
Sbjct: 121 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 180

Query: 181 GSC 183
           GSC
Sbjct: 181 GSC 183


>gi|207028935 microfibrillar-associated protein 2 isoform b
           precursor [Homo sapiens]
          Length = 182

 Score =  385 bits (990), Expect = e-108
 Identities = 182/183 (99%), Positives = 182/183 (99%), Gaps = 1/183 (0%)

Query: 1   MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 60
           MRAAYLFLLFLP GLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE
Sbjct: 1   MRAAYLFLLFLP-GLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 59

Query: 61  QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 120
           QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE
Sbjct: 60  QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 119

Query: 121 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 180
           VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC
Sbjct: 120 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 179

Query: 181 GSC 183
           GSC
Sbjct: 180 GSC 182


>gi|207028905 microfibrillar-associated protein 2 isoform b
           precursor [Homo sapiens]
          Length = 182

 Score =  385 bits (990), Expect = e-108
 Identities = 182/183 (99%), Positives = 182/183 (99%), Gaps = 1/183 (0%)

Query: 1   MRAAYLFLLFLPAGLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 60
           MRAAYLFLLFLP GLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE
Sbjct: 1   MRAAYLFLLFLP-GLLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEE 59

Query: 61  QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 120
           QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE
Sbjct: 60  QFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNE 119

Query: 121 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 180
           VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC
Sbjct: 120 VCFYSLRRVYVINKEICVRTVCAHEELLRADLCRDKFSKCGVMASSGLCQSVAASCARSC 179

Query: 181 GSC 183
           GSC
Sbjct: 180 GSC 182


>gi|4505089 microfibrillar associated protein 5 [Homo sapiens]
          Length = 173

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 33/59 (55%), Positives = 48/59 (81%)

Query: 96  DCREEQYPCTRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTVCAHEELLRADLCR 154
           +C +E++ CTRLYS+HRP KQC++++CF SLRR+Y++NKEIC R VC   E ++ +LCR
Sbjct: 83  ECWDEKFTCTRLYSVHRPVKQCIHQLCFTSLRRMYIVNKEICSRLVCKEHEAMKDELCR 141


>gi|118600967 shroom family member 4 [Homo sapiens]
          Length = 1493

 Score = 36.2 bits (82), Expect = 0.016
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 10/67 (14%)

Query: 94  PLDCREEQYPCTRLYS-------IHRPCKQCLNEVCFYSLRRVYVINKEICVRTVCAHEE 146
           PL C +  Y  T  YS       +H PC  C  E+C   L+R  + N   C    C H +
Sbjct: 874 PLHCGDFDYHRTCSYSCSVQGALVHDPCIYCSGEICPALLKRNMMPN---CYNCRCHHHQ 930

Query: 147 LLRADLC 153
            +R  +C
Sbjct: 931 CIRCSVC 937


>gi|122937283 6720455I24Rik homolog [Homo sapiens]
          Length = 1413

 Score = 35.4 bits (80), Expect = 0.028
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 95   LDCREEQYPCTRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTVCAHEEL 147
            L C +   PCTRL+S  +        VC +  +RVY ++++IC +  C    L
Sbjct: 1344 LACIKVSRPCTRLFSETKAFPVWEGGVCHHVYKRVYRVHQDICFKESCESTSL 1396


>gi|116805330 small conductance calcium-activated potassium channel
           protein 3 isoform a [Homo sapiens]
          Length = 731

 Score = 32.7 bits (73), Expect = 0.18
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 55  PRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPL 95
           P+P + Q Q Q QQQ QQ+  P P  +    + +P  PG L
Sbjct: 61  PQPPQLQQQQQQQQQQQQQQPPHPLSQLAQLQSQPVHPGLL 101



 Score = 30.4 bits (67), Expect = 0.89
 Identities = 17/47 (36%), Positives = 22/47 (46%)

Query: 55  PRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQ 101
           P   +EQ Q Q QQQ QQ   PAP   P        +P P   +++Q
Sbjct: 24  PSSGDEQQQQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQ 70



 Score = 28.9 bits (63), Expect = 2.6
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%)

Query: 55 PRPSEEQFQFQSQQQVQQEVIPAPTP-----EPGNAELEPTEP 92
          P PS    Q Q QQQ QQ+  P P P     +P    L+P  P
Sbjct: 22 PCPSSGDEQQQQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPP 64


>gi|54792138 helicase with zinc finger domain [Homo sapiens]
          Length = 1942

 Score = 32.0 bits (71), Expect = 0.30
 Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 13/102 (12%)

Query: 25   PLPPFPDHVQYTHYSDQIDN-PDYYDYQEVTPRPSE-EQFQFQSQQQVQQ---EVIPAPT 79
            P PPFP   Q+T  + Q +N P+     ++ P+P++  Q Q Q  QQ QQ   ++ PA  
Sbjct: 1367 PRPPFPIPQQHTLLNQQQNNLPE--QPNQIPPQPNQVVQQQSQLNQQPQQPPPQLSPAYQ 1424

Query: 80   PEPGNAEL------EPTEPGPLDCREEQYPCTRLYSIHRPCK 115
              P NA         P  P       EQ P   L   H P +
Sbjct: 1425 AGPNNAFFNSAVAHRPQSPPAEAVIPEQQPPPMLQEGHSPLR 1466


>gi|66932986 filamin-binding LIM protein-1 isoform b [Homo sapiens]
          Length = 374

 Score = 31.6 bits (70), Expect = 0.40
 Identities = 38/166 (22%), Positives = 55/166 (33%), Gaps = 23/166 (13%)

Query: 22  DLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTPE 81
           DLD LPP P              P     +E  P P         +Q     + P P P 
Sbjct: 100 DLDLLPPPPP-----------PPPVLLPSEEEAPAPMGASLIADLEQL---HLSPPPPPP 145

Query: 82  PGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTV 141
              AE    +PGPL   EE+ P      +    K    ++C +  +   V  +E+ V  +
Sbjct: 146 QAPAEGPSVQPGPLRPMEEELPPPPAEPVE---KGASTDICAFCHKT--VSPRELAVEAM 200

Query: 142 CA--HEELLRADLCRDKFSKCGVMASSG--LCQSVAASCARSCGSC 183
               H +      CR + +        G  LC+         CG C
Sbjct: 201 KRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTLERCGKC 246


>gi|66932982 filamin-binding LIM protein-1 isoform a [Homo sapiens]
          Length = 373

 Score = 31.6 bits (70), Expect = 0.40
 Identities = 38/166 (22%), Positives = 55/166 (33%), Gaps = 23/166 (13%)

Query: 22  DLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTPE 81
           DLD LPP P              P     +E  P P         +Q     + P P P 
Sbjct: 100 DLDLLPPPPP-----------PPPVLLPSEEEAPAPMGASLIADLEQL---HLSPPPPPP 145

Query: 82  PGNAELEPTEPGPLDCREEQYPCTRLYSIHRPCKQCLNEVCFYSLRRVYVINKEICVRTV 141
              AE    +PGPL   EE+ P      +    K    ++C +  +   V  +E+ V  +
Sbjct: 146 QAPAEGPSVQPGPLRPMEEELPPPPAEPVE---KGASTDICAFCHKT--VSPRELAVEAM 200

Query: 142 CA--HEELLRADLCRDKFSKCGVMASSG--LCQSVAASCARSCGSC 183
               H +      CR + +        G  LC+         CG C
Sbjct: 201 KRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQDTLERCGKC 246


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 31.6 bits (70), Expect = 0.40
 Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 15  LLAQGQYDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEV 74
           L  Q Q    PLPP P H+  +  S  + +      +   P PS+ Q QF   Q   +  
Sbjct: 862 LRPQSQPPEGPLPPAP-HLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSP 920

Query: 75  IPAPT----PEPGNAELEPTEPGP 94
            P PT    PEP      P  P P
Sbjct: 921 TPPPTLHLVPEPA----APPPPPP 940


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 31.2 bits (69), Expect = 0.52
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 7/73 (9%)

Query: 12   PAGLLAQGQYDLDPLPPFP--DHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQ 69
            P     Q QY    LP      + Q +H+  Q        +Q+V+P  ++  FQ  +   
Sbjct: 3881 PTSPYTQYQYSSPALPTQAPTSYTQQSHFEQQT-----LYHQQVSPYQTQPTFQAVATMS 3935

Query: 70   VQQEVIPAPTPEP 82
               +V P PTP+P
Sbjct: 3936 FTPQVQPTPTPQP 3948


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 31.2 bits (69), Expect = 0.52
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 7/73 (9%)

Query: 12   PAGLLAQGQYDLDPLPPFP--DHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQ 69
            P     Q QY    LP      + Q +H+  Q        +Q+V+P  ++  FQ  +   
Sbjct: 3881 PTSPYTQYQYSSPALPTQAPTSYTQQSHFEQQT-----LYHQQVSPYQTQPTFQAVATMS 3935

Query: 70   VQQEVIPAPTPEP 82
               +V P PTP+P
Sbjct: 3936 FTPQVQPTPTPQP 3948


>gi|221139761 zinc finger protein 853 [Homo sapiens]
          Length = 659

 Score = 30.8 bits (68), Expect = 0.68
 Identities = 17/51 (33%), Positives = 25/51 (49%)

Query: 51  QEVTPRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQ 101
           QE   +  ++Q   Q Q+Q+QQ+ +  P  EP   E    E  P+D   EQ
Sbjct: 283 QEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQ 333


>gi|195972805 myocyte enhancer factor 2A isoform 4 [Homo sapiens]
          Length = 429

 Score = 30.8 bits (68), Expect = 0.68
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 56  RPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGP 94
           R +   FQ Q QQQ QQ+  P P P+P     +P +P P
Sbjct: 335 RMTPSGFQQQQQQQQQQQPPPPPQPQP-----QPPQPQP 368


>gi|195972803 myocyte enhancer factor 2A isoform 3 [Homo sapiens]
          Length = 437

 Score = 30.8 bits (68), Expect = 0.68
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 56  RPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGP 94
           R +   FQ Q QQQ QQ+  P P P+P     +P +P P
Sbjct: 343 RMTPSGFQQQQQQQQQQQPPPPPQPQP-----QPPQPQP 376


>gi|195972801 myocyte enhancer factor 2A isoform 2 [Homo sapiens]
          Length = 497

 Score = 30.8 bits (68), Expect = 0.68
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 56  RPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGP 94
           R +   FQ Q QQQ QQ+  P P P+P     +P +P P
Sbjct: 403 RMTPSGFQQQQQQQQQQQPPPPPQPQP-----QPPQPQP 436


>gi|195972799 myocyte enhancer factor 2A isoform 1 [Homo sapiens]
          Length = 499

 Score = 30.8 bits (68), Expect = 0.68
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)

Query: 56  RPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGP 94
           R +   FQ Q QQQ QQ+  P P P+P     +P +P P
Sbjct: 405 RMTPSGFQQQQQQQQQQQPPPPPQPQP-----QPPQPQP 438


>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
           sapiens]
          Length = 1158

 Score = 30.8 bits (68), Expect = 0.68
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 6/50 (12%)

Query: 38  YSDQIDNPDYYDYQEV------TPRPSEEQFQFQSQQQVQQEVIPAPTPE 81
           Y+DQI+  DY D++ +       P PS  +   +   +  +E  PAP PE
Sbjct: 235 YNDQIEREDYEDFEYIRRQKQPRPPPSRRRRPERVWPEPPEEKAPAPAPE 284


>gi|38348304 von Willebrand factor A domain containing 2 [Homo
           sapiens]
          Length = 725

 Score = 30.8 bits (68), Expect = 0.68
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 15/62 (24%)

Query: 96  DCREEQYPC-------TRLYSIHRPCKQ-------CLNEVC-FYSLRRVYVINKEICVRT 140
           DCR E +PC        R ++ + PC +        L   C FYS +RV++ +   C RT
Sbjct: 234 DCRVEAHPCEHRTLEMVREFAGNAPCWRGSRRTLAVLAAHCPFYSWKRVFLTHPATCYRT 293

Query: 141 VC 142
            C
Sbjct: 294 TC 295


>gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled-coil
            containing 1 isoform 1 [Homo sapiens]
          Length = 1861

 Score = 30.4 bits (67), Expect = 0.89
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 45   PDYYDYQEVTPRPSEEQFQFQ-SQQQVQQEVIPAPTPEPGNAELEPTEPGPLD 96
            P   + + +  R  EE  Q Q SQQQ QQ  +PAP  +  N E  PT PG  D
Sbjct: 1401 PTNQEVKRLLARVEEECKQLQRSQQQKQQGPLPAPLNDSENEEDTPT-PGLSD 1452


>gi|90903231 huntingtin [Homo sapiens]
          Length = 3144

 Score = 30.4 bits (67), Expect = 0.89
 Identities = 16/45 (35%), Positives = 21/45 (46%)

Query: 51 QEVTPRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPL 95
          Q+   +  ++Q Q Q QQQ QQ   P P P P      P +  PL
Sbjct: 19 QQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPL 63



 Score = 29.6 bits (65), Expect = 1.5
 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 50  YQEVTPRPSEEQFQFQSQQQVQQEVIPAPTPEP----------GNAELEPTEPGPLDCRE 99
           +Q+   +  ++Q Q Q QQQ QQ+  P P P P              L   +P P     
Sbjct: 17  FQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPP 76

Query: 100 EQYPCTRLYSIHRPCKQ 116
              P      +HRP K+
Sbjct: 77  PPGPAVAEEPLHRPKKE 93


>gi|196114999 special AT-rich sequence binding protein 1 [Homo
           sapiens]
          Length = 763

 Score = 30.4 bits (67), Expect = 0.89
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 59  EEQFQFQSQQQVQQEVIPAPTPE------PGNAELEPTEPGPLDCREEQYPCTR 106
           ++Q Q Q QQQ QQ+  P P P+      P     +PT   P +  EE    TR
Sbjct: 593 QQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAESDEENRQKTR 646


>gi|4506791 special AT-rich sequence binding protein 1 [Homo
           sapiens]
          Length = 763

 Score = 30.4 bits (67), Expect = 0.89
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 59  EEQFQFQSQQQVQQEVIPAPTPE------PGNAELEPTEPGPLDCREEQYPCTR 106
           ++Q Q Q QQQ QQ+  P P P+      P     +PT   P +  EE    TR
Sbjct: 593 QQQQQQQQQQQQQQQAPPPPQPQQQPQTGPRLPPRQPTVASPAESDEENRQKTR 646


>gi|93141033 PAX interacting protein 1 [Homo sapiens]
          Length = 1069

 Score = 30.4 bits (67), Expect = 0.89
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 61  QFQFQSQQQVQQEVIPAPTPEPGNAELEPTE---PGPLDCREEQYPCTRLY---SIHRPC 114
           Q Q Q QQQ+ Q+  P   P P + + +  +   P     ++ Q+P  +L+    +HRP 
Sbjct: 426 QLQQQQQQQISQQPYPQQPPHPFSQQQQQQQQAHPHQFSQQQLQFPQQQLHPPQQLHRPQ 485

Query: 115 KQ 116
           +Q
Sbjct: 486 QQ 487


>gi|221316616 extracellular matrix protein 1 isoform 2 precursor
           [Homo sapiens]
          Length = 415

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 14/97 (14%)

Query: 21  YDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTP 80
           Y   P PP    +   H       P +    +V P PS+E    Q     Q++++PA  P
Sbjct: 43  YAAPPSPPLSRSLPMDHPDSSQHGPPFEGQSQVQPPPSQEATPLQ-----QEKLLPAQLP 97

Query: 81  EPGNAELEPTEPGPLDCREEQYPCTR-LYSIHRPCKQ 116
               AE E   P P    +E  P  + L S+  P +Q
Sbjct: 98  ----AEKEVGPPLP----QEAVPLQKELPSLQHPNEQ 126


>gi|221316614 extracellular matrix protein 1 isoform 1 precursor
           [Homo sapiens]
          Length = 540

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 14/97 (14%)

Query: 21  YDLDPLPPFPDHVQYTHYSDQIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTP 80
           Y   P PP    +   H       P +    +V P PS+E    Q     Q++++PA  P
Sbjct: 43  YAAPPSPPLSRSLPMDHPDSSQHGPPFEGQSQVQPPPSQEATPLQ-----QEKLLPAQLP 97

Query: 81  EPGNAELEPTEPGPLDCREEQYPCTR-LYSIHRPCKQ 116
               AE E   P P    +E  P  + L S+  P +Q
Sbjct: 98  ----AEKEVGPPLP----QEAVPLQKELPSLQHPNEQ 126


>gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens]
          Length = 294

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 14/48 (29%), Positives = 19/48 (39%)

Query: 55  PRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREEQY 102
           PR  E   +     +  Q+++P P P P    L    PGP  C    Y
Sbjct: 218 PRAGERDNRCNRAHEEAQKLLPPPPPPPPPPALPSRRPGPEPCAPPAY 265


>gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens]
          Length = 669

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 17/63 (26%), Positives = 28/63 (44%)

Query: 41  QIDNPDYYDYQEVTPRPSEEQFQFQSQQQVQQEVIPAPTPEPGNAELEPTEPGPLDCREE 100
           Q   P+  D  +  P+P   + +  SQ ++ +    AP PE G   L+P  P   D  ++
Sbjct: 23  QASQPEPSDLPKKPPKPEFGKLKKFSQPELSEHPKKAPLPEFGAVSLKPPPPEVTDLPKK 82

Query: 101 QYP 103
             P
Sbjct: 83  PPP 85


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,176,783
Number of Sequences: 37866
Number of extensions: 528301
Number of successful extensions: 3230
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 2986
Number of HSP's gapped (non-prelim): 266
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.