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Search of human proteins with 9625002
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9625002 integrin, beta 6 [Homo sapiens]
(788 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9625002 integrin, beta 6 [Homo sapiens] 1658 0.0
gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens] 835 0.0
gi|20127446 integrin, beta 5 [Homo sapiens] 783 0.0
gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens] 668 0.0
gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens] 668 0.0
gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens] 667 0.0
gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens] 651 0.0
gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens] 651 0.0
gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens] 651 0.0
gi|4504777 integrin, beta 7 [Homo sapiens] 567 e-161
gi|188595677 integrin, beta 2 precursor [Homo sapiens] 555 e-158
gi|89191865 integrin, beta 2 precursor [Homo sapiens] 555 e-158
gi|4504779 integrin, beta 8 precursor [Homo sapiens] 540 e-153
gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens] 433 e-121
gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens] 433 e-121
gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens] 433 e-121
gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains) ... 139 1e-32
gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens] 96 2e-19
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens] 88 4e-17
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens] 88 4e-17
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens] 88 4e-17
gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens] 87 5e-17
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 86 2e-16
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 85 2e-16
gi|153946395 tenascin C precursor [Homo sapiens] 82 1e-15
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 81 3e-15
gi|157384973 tenascin R [Homo sapiens] 80 1e-14
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 75 2e-13
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 75 2e-13
gi|14192943 multiple EGF-like-domains 10 [Homo sapiens] 73 9e-13
>gi|9625002 integrin, beta 6 [Homo sapiens]
Length = 788
Score = 1658 bits (4293), Expect = 0.0
Identities = 788/788 (100%), Positives = 788/788 (100%)
Query: 1 MGIELLCLFFLFLGRNDHVQGGCALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCD 60
MGIELLCLFFLFLGRNDHVQGGCALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCD
Sbjct: 1 MGIELLCLFFLFLGRNDHVQGGCALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCD 60
Query: 61 TPANLLAKGCQLNFIENPVSQVEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQT 120
TPANLLAKGCQLNFIENPVSQVEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQT
Sbjct: 61 TPANLLAKGCQLNFIENPVSQVEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQT 120
Query: 121 LQVHVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEK 180
LQVHVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEK
Sbjct: 121 LQVHVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEK 180
Query: 181 PVSPFVKTTPEEIANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPE 240
PVSPFVKTTPEEIANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPE
Sbjct: 181 PVSPFVKTTPEEIANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPE 240
Query: 241 GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNE 300
GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNE
Sbjct: 241 GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNE 300
Query: 301 YSMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNI 360
YSMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNI
Sbjct: 301 YSMSTVLEYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNI 360
Query: 361 LQLIISAYEELRSEVELEVLGDTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVT 420
LQLIISAYEELRSEVELEVLGDTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVT
Sbjct: 361 LQLIISAYEELRSEVELEVLGDTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVT 420
Query: 421 VNIPHCERRSRHIIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCA 480
VNIPHCERRSRHIIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCA
Sbjct: 421 VNIPHCERRSRHIIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCA 480
Query: 481 CHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCD 540
CHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCD
Sbjct: 481 CHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCD 540
Query: 541 NFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCG 600
NFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCG
Sbjct: 541 NFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCG 600
Query: 601 KCVCTNPGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEE 660
KCVCTNPGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEE
Sbjct: 601 KCVCTNPGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEE 660
Query: 661 DFSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAIL 720
DFSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAIL
Sbjct: 661 DFSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAIL 720
Query: 721 LIGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYKHREKQ 780
LIGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYKHREKQ
Sbjct: 721 LIGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYKHREKQ 780
Query: 781 KVDLSTDC 788
KVDLSTDC
Sbjct: 781 KVDLSTDC 788
>gi|47078292 integrin beta chain, beta 3 precursor [Homo sapiens]
Length = 788
Score = 835 bits (2158), Expect = 0.0
Identities = 387/760 (50%), Positives = 521/760 (68%), Gaps = 11/760 (1%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCDTPANLLAKGCQLNFIENPVSQV 82
C G +C+ CL + P CAWC+ E P G RCD NLL C IE PVS+
Sbjct: 31 CTTRGVSSCQQCLAVSPMCAWCSDEAL--PLG-SPRCDLKENLLKDNCAPESIEFPVSEA 87
Query: 83 EILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDLS 142
+L+++PLS +SS + Q++PQ + L+LRP ++ + VRQ EDYPVD+YYLMDLS
Sbjct: 88 RVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLS 147
Query: 143 ASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEE-IANPCSSIP 201
SM DDL +I+ LG++L+ +M KLTSN R+GFG+FV+KPVSP++ +P E + NPC +
Sbjct: 148 YSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMK 207
Query: 202 YFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRND 261
CLP FG+KH+L LT+ RFNE VK Q +S N D PEGGFDAIMQA VC EKIGWRND
Sbjct: 208 TTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRND 267
Query: 262 SLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLVQ 321
+ HLLVF +DA +H +D +LAGIV PNDG CH+ S N YS ST ++YP++G + +KL Q
Sbjct: 268 ASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQ 327
Query: 322 NNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEVLG 381
N+ LIFAVT+ V+LY+NY++LIPG TVG+L DS N+LQLI+ AY ++RS+VELEV
Sbjct: 328 KNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRD 387
Query: 382 DTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVTVNIPHC-ERRSRHIIIKPVGL 440
E L+LSF A C N + K C +K+GDT SFS+ + C + + + IKPVG
Sbjct: 388 LPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGF 447
Query: 441 GDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGED---ML 497
D+L + V+ +C+C CQ + E NS +C++GNG+F+CGVC C PG +G +CEC E+
Sbjct: 448 KDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPS 507
Query: 498 STDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGD 557
D C P CS RG+C CGQC+CH S +G I G YC+CD+FSCVR+KG +C G+G
Sbjct: 508 QQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQ 567
Query: 558 CDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERC 617
C CG+C+C S WTG YCNCTT TD+C+S +G+LCSGRG C CG CVC PG+ G TCE+C
Sbjct: 568 CSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKC 627
Query: 618 PTCGDPCNSKRSCIECHLSAAGQAREE--CVDKCKLAGATISEEEDFSKDGSVSCSLQGE 675
PTC D C K+ C+EC G +E C C+ ++ E +D KD +V+C+ + E
Sbjct: 628 PTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIESVKELKDTGKD-AVNCTYKNE 686
Query: 676 NECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIGVVLLCIWKLLVS 735
++C++ F D+ GK+I++ + E +CPK P+I +++L V AILLIG+ L IWKLL++
Sbjct: 687 DDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLIT 746
Query: 736 FHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYK 775
HDRKE AKFE ER++AKW T NPLY+ +TSTF N+TY+
Sbjct: 747 IHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTNITYR 786
>gi|20127446 integrin, beta 5 [Homo sapiens]
Length = 799
Score = 783 bits (2021), Expect = 0.0
Identities = 375/757 (49%), Positives = 509/757 (67%), Gaps = 15/757 (1%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCDTPANLLAKGCQLNFIENPVSQV 82
C G A +CE+CLLI P+CAWC++E+F P + RCD ANL+ GC IE+P S
Sbjct: 28 CTSGSATSCEECLLIHPKCAWCSKEDFGSPRSITSRCDLRANLVKNGCG-GEIESPASSF 86
Query: 83 EILKNKPLSV-GRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDL 141
+L++ PLS G D++Q+ PQ + + LRPG T Q+ VRQ EDYPVDLYYLMDL
Sbjct: 87 HVLRSLPLSSKGSGSAGWDVIQMTPQEIAVNLRPGDKTTFQLQVRQVEDYPVDLYYLMDL 146
Query: 142 SASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIP 201
S SM DDL+ I+ LG++L++EM KLTSNFRLGFGSFV+K +SPF T P NPC
Sbjct: 147 SLSMKDDLDNIRSLGTKLAEEMRKLTSNFRLGFGSFVDKDISPFSYTAPRYQTNPCIGYK 206
Query: 202 YF--CLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWR 259
F C+P+FGF+H+LPLT+ + FNE V+ Q++S N D PEGGFDA++QAAVCKEKIGWR
Sbjct: 207 LFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRVSRNRDAPEGGFDAVLQAAVCKEKIGWR 266
Query: 260 NDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKL 319
D+LHLLVF +D H +D KL G+V P+DG CHL+ NEY+ S ++YP++ L +KL
Sbjct: 267 KDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYTASNQMDYPSLALLGEKL 326
Query: 320 VQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEV 379
+NN+ LIFAVT+ LY+N+ LIPG TV +L DS NI+QLII+AY +RS+VEL V
Sbjct: 327 AENNINLIFAVTKNHYMLYKNFTALIPGTTVEILDGDSKNIIQLIINAYNSIRSKVELSV 386
Query: 380 LGDTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVTVNIPHC-ERRSRHII-IKP 437
E LNL FTA C +G + Q+KC +K+GDTASF V++ C R + H+ ++P
Sbjct: 387 WDQPEDLNLFFTATCQDGVSYPGQRKCEGLKIGDTASFEVSLEARSCPSRHTEHVFALRP 446
Query: 438 VGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCEC--GED 495
VG D+LE+ V+ C C C +E NS++C +G+G++ CG+C C PG++G RCEC GE+
Sbjct: 447 VGFRDSLEVGVTYNCTCGCSVGLEPNSARC-NGSGTYVCGLCECSPGYLGTRCECQDGEN 505
Query: 496 M-LSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGG 554
+ + C+EA P CSGRGDC C QC C S +G IYGP+C+CDNFSC R+KG+LC G
Sbjct: 506 QSVYQNLCREAEGKPLCSGRGDCSCNQCSCFESEFGKIYGPFCECDNFSCARNKGVLCSG 565
Query: 555 NGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTC 614
+G+C CGEC C +G+ G+ CNC+T +C DG +CS RG C+CG+C CT PGA G C
Sbjct: 566 HGECHCGECKCHAGYIGDNCNCSTDISTCRGRDGQICSERGHCLCGQCQCTEPGAFGEMC 625
Query: 615 ERCPTCGDPCNSKRSCIECHLSAAGQA-REECVDKCKLAGATISEEEDFSKDG--SVSCS 671
E+CPTC D C++KR C+EC L +G+ + C C+ I+ + KD +V C
Sbjct: 626 EKCPTCPDACSTKRDCVECLLLHSGKPDNQTCHSLCR--DEVITWVDTIVKDDQEAVLCF 683
Query: 672 LQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIGVVLLCIWK 731
+ +C++ F GK+ + + E +C PN I+L V +ILL+G+ LL IWK
Sbjct: 684 YKTAKDCVMMFTYVELPSGKSNLTVLREPECGNTPNAMTILLAVVGSILLVGLALLAIWK 743
Query: 732 LLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTST 768
LLV+ HDR+E AKF++ERS+A+++ +NPLYR ST
Sbjct: 744 LLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
>gi|19743813 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 668 bits (1723), Expect = 0.0
Identities = 330/774 (42%), Positives = 460/774 (59%), Gaps = 25/774 (3%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPS-GVGERCDTPANLLAKGCQLNFIENPVSQ 81
C A++C +C+ GP C WC F RCD L KGC + IENP
Sbjct: 27 CLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGS 86
Query: 82 VEILKNKPLSVGRQKNSS------DIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDL 135
+I KNK ++ R K ++ DI QI PQ L+L+LR G QT + ++ EDYP+DL
Sbjct: 87 KDIKKNKNVT-NRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDL 145
Query: 136 YYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIAN 195
YYLMDLS SM DDL +K LG+ L EM ++TS+FR+GFGSFVEK V P++ TTP ++ N
Sbjct: 146 YYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRN 205
Query: 196 PCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEK 255
PC+S C F +K++L LTN E FNE+V Q+IS N+D+PEGGFDAIMQ AVC
Sbjct: 206 PCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSL 264
Query: 256 IGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQL 315
IGWRN + LLVF +DA HF D KL GIV+PNDG CHL++ N Y+MS +YP+I L
Sbjct: 265 IGWRNVT-RLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN-NMYTMSHYYDYPSIAHL 322
Query: 316 IDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEV 375
+ KL +NN+ IFAVT+E +Y+ LIP + VG L +S N++QLII AY L SEV
Sbjct: 323 VQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEV 382
Query: 376 ELEVLGDTEGLNLSFTAICNNGT--LFQHQKKCSHMKVGDTASFSVTVNIPHCERR-SRH 432
LE +EG+ +S+ + C NG ++ +KCS++ +GD F +++ C ++ S
Sbjct: 383 ILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDS 442
Query: 433 IIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCEC 492
I+P+G + +E+++ C C+CQ E S KCH GNG+F+CG C C+ G +G CEC
Sbjct: 443 FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCEC 502
Query: 493 GEDMLSTDS----CKEAPDHPSCSGRGDCYCGQCICHLSPYGN-IY-GPYCQCDNFSCVR 546
D ++++ C++ CS G+C CGQC+C N IY G +C+CDNF+C R
Sbjct: 503 STDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDR 562
Query: 547 HKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTN 606
GL+CGGNG C C C C +TG C+C+ T +C + +G +C+GRG C CG C CT+
Sbjct: 563 SNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTD 622
Query: 607 PGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEED----- 661
P G TCE C TC C + C++C G+ ++ C +C T E D
Sbjct: 623 PKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQP 682
Query: 662 FSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILL 721
D C + ++C F + + + ++H + +CP P+I I+ GV I+L
Sbjct: 683 VQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVL 742
Query: 722 IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYK 775
IG+ LL IWKLL+ HDR+E AKFE E+ AKW TG NP+Y+ + +T N Y+
Sbjct: 743 IGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYE 796
>gi|19743823 integrin beta 1 isoform 1A precursor [Homo sapiens]
Length = 798
Score = 668 bits (1723), Expect = 0.0
Identities = 330/774 (42%), Positives = 460/774 (59%), Gaps = 25/774 (3%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPS-GVGERCDTPANLLAKGCQLNFIENPVSQ 81
C A++C +C+ GP C WC F RCD L KGC + IENP
Sbjct: 27 CLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGS 86
Query: 82 VEILKNKPLSVGRQKNSS------DIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDL 135
+I KNK ++ R K ++ DI QI PQ L+L+LR G QT + ++ EDYP+DL
Sbjct: 87 KDIKKNKNVT-NRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDL 145
Query: 136 YYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIAN 195
YYLMDLS SM DDL +K LG+ L EM ++TS+FR+GFGSFVEK V P++ TTP ++ N
Sbjct: 146 YYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRN 205
Query: 196 PCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEK 255
PC+S C F +K++L LTN E FNE+V Q+IS N+D+PEGGFDAIMQ AVC
Sbjct: 206 PCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSL 264
Query: 256 IGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQL 315
IGWRN + LLVF +DA HF D KL GIV+PNDG CHL++ N Y+MS +YP+I L
Sbjct: 265 IGWRNVT-RLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN-NMYTMSHYYDYPSIAHL 322
Query: 316 IDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEV 375
+ KL +NN+ IFAVT+E +Y+ LIP + VG L +S N++QLII AY L SEV
Sbjct: 323 VQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEV 382
Query: 376 ELEVLGDTEGLNLSFTAICNNGT--LFQHQKKCSHMKVGDTASFSVTVNIPHCERR-SRH 432
LE +EG+ +S+ + C NG ++ +KCS++ +GD F +++ C ++ S
Sbjct: 383 ILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDS 442
Query: 433 IIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCEC 492
I+P+G + +E+++ C C+CQ E S KCH GNG+F+CG C C+ G +G CEC
Sbjct: 443 FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCEC 502
Query: 493 GEDMLSTDS----CKEAPDHPSCSGRGDCYCGQCICHLSPYGN-IY-GPYCQCDNFSCVR 546
D ++++ C++ CS G+C CGQC+C N IY G +C+CDNF+C R
Sbjct: 503 STDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDR 562
Query: 547 HKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTN 606
GL+CGGNG C C C C +TG C+C+ T +C + +G +C+GRG C CG C CT+
Sbjct: 563 SNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTD 622
Query: 607 PGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEED----- 661
P G TCE C TC C + C++C G+ ++ C +C T E D
Sbjct: 623 PKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQP 682
Query: 662 FSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILL 721
D C + ++C F + + + ++H + +CP P+I I+ GV I+L
Sbjct: 683 VQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVL 742
Query: 722 IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYK 775
IG+ LL IWKLL+ HDR+E AKFE E+ AKW TG NP+Y+ + +T N Y+
Sbjct: 743 IGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYE 796
>gi|19743819 integrin beta 1 isoform 1D precursor [Homo sapiens]
Length = 801
Score = 667 bits (1721), Expect = 0.0
Identities = 330/773 (42%), Positives = 458/773 (59%), Gaps = 25/773 (3%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPS-GVGERCDTPANLLAKGCQLNFIENPVSQ 81
C A++C +C+ GP C WC F RCD L KGC + IENP
Sbjct: 27 CLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGS 86
Query: 82 VEILKNKPLSVGRQKNSS------DIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDL 135
+I KNK ++ R K ++ DI QI PQ L+L+LR G QT + ++ EDYP+DL
Sbjct: 87 KDIKKNKNVT-NRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDL 145
Query: 136 YYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIAN 195
YYLMDLS SM DDL +K LG+ L EM ++TS+FR+GFGSFVEK V P++ TTP ++ N
Sbjct: 146 YYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRN 205
Query: 196 PCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEK 255
PC+S C F +K++L LTN E FNE+V Q+IS N+D+PEGGFDAIMQ AVC
Sbjct: 206 PCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSL 264
Query: 256 IGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQL 315
IGWRN + LLVF +DA HF D KL GIV+PNDG CHL++ N Y+MS +YP+I L
Sbjct: 265 IGWRNVT-RLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN-NMYTMSHYYDYPSIAHL 322
Query: 316 IDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEV 375
+ KL +NN+ IFAVT+E +Y+ LIP + VG L +S N++QLII AY L SEV
Sbjct: 323 VQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEV 382
Query: 376 ELEVLGDTEGLNLSFTAICNNGT--LFQHQKKCSHMKVGDTASFSVTVNIPHCERR-SRH 432
LE +EG+ +S+ + C NG ++ +KCS++ +GD F +++ C ++ S
Sbjct: 383 ILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDS 442
Query: 433 IIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCEC 492
I+P+G + +E+++ C C+CQ E S KCH GNG+F+CG C C+ G +G CEC
Sbjct: 443 FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCEC 502
Query: 493 GEDMLSTDS----CKEAPDHPSCSGRGDCYCGQCICHLSPYGN-IY-GPYCQCDNFSCVR 546
D ++++ C++ CS G+C CGQC+C N IY G +C+CDNF+C R
Sbjct: 503 STDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDR 562
Query: 547 HKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTN 606
GL+CGGNG C C C C +TG C+C+ T +C + +G +C+GRG C CG C CT+
Sbjct: 563 SNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTD 622
Query: 607 PGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEED----- 661
P G TCE C TC C + C++C G+ ++ C +C T E D
Sbjct: 623 PKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQP 682
Query: 662 FSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILL 721
D C + ++C F + + + ++H + +CP P+I I+ GV I+L
Sbjct: 683 VQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVL 742
Query: 722 IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTY 774
IG+ LL IWKLL+ HDR+E AKFE E+ AKW T NP+Y+ + FKN Y
Sbjct: 743 IGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIYKSPINNFKNPNY 795
>gi|19743817 integrin beta 1 isoform 1C-1 precursor [Homo sapiens]
Length = 825
Score = 651 bits (1679), Expect = 0.0
Identities = 323/755 (42%), Positives = 448/755 (59%), Gaps = 25/755 (3%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPS-GVGERCDTPANLLAKGCQLNFIENPVSQ 81
C A++C +C+ GP C WC F RCD L KGC + IENP
Sbjct: 27 CLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGS 86
Query: 82 VEILKNKPLSVGRQKNSS------DIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDL 135
+I KNK ++ R K ++ DI QI PQ L+L+LR G QT + ++ EDYP+DL
Sbjct: 87 KDIKKNKNVT-NRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDL 145
Query: 136 YYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIAN 195
YYLMDLS SM DDL +K LG+ L EM ++TS+FR+GFGSFVEK V P++ TTP ++ N
Sbjct: 146 YYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRN 205
Query: 196 PCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEK 255
PC+S C F +K++L LTN E FNE+V Q+IS N+D+PEGGFDAIMQ AVC
Sbjct: 206 PCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSL 264
Query: 256 IGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQL 315
IGWRN + LLVF +DA HF D KL GIV+PNDG CHL++ N Y+MS +YP+I L
Sbjct: 265 IGWRNVT-RLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN-NMYTMSHYYDYPSIAHL 322
Query: 316 IDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEV 375
+ KL +NN+ IFAVT+E +Y+ LIP + VG L +S N++QLII AY L SEV
Sbjct: 323 VQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEV 382
Query: 376 ELEVLGDTEGLNLSFTAICNNGT--LFQHQKKCSHMKVGDTASFSVTVNIPHCERR-SRH 432
LE +EG+ +S+ + C NG ++ +KCS++ +GD F +++ C ++ S
Sbjct: 383 ILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDS 442
Query: 433 IIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCEC 492
I+P+G + +E+++ C C+CQ E S KCH GNG+F+CG C C+ G +G CEC
Sbjct: 443 FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCEC 502
Query: 493 GEDMLSTDS----CKEAPDHPSCSGRGDCYCGQCICHLSPYGN-IY-GPYCQCDNFSCVR 546
D ++++ C++ CS G+C CGQC+C N IY G +C+CDNF+C R
Sbjct: 503 STDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDR 562
Query: 547 HKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTN 606
GL+CGGNG C C C C +TG C+C+ T +C + +G +C+GRG C CG C CT+
Sbjct: 563 SNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTD 622
Query: 607 PGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEED----- 661
P G TCE C TC C + C++C G+ ++ C +C T E D
Sbjct: 623 PKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQP 682
Query: 662 FSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILL 721
D C + ++C F + + + ++H + +CP P+I I+ GV I+L
Sbjct: 683 VQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVL 742
Query: 722 IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQT 756
IG+ LL IWKLL+ HDR+E AKFE E+ AKW T
Sbjct: 743 IGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT 777
>gi|19743815 integrin beta 1 isoform 1B precursor [Homo sapiens]
Length = 789
Score = 651 bits (1679), Expect = 0.0
Identities = 323/755 (42%), Positives = 448/755 (59%), Gaps = 25/755 (3%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPS-GVGERCDTPANLLAKGCQLNFIENPVSQ 81
C A++C +C+ GP C WC F RCD L KGC + IENP
Sbjct: 27 CLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGS 86
Query: 82 VEILKNKPLSVGRQKNSS------DIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDL 135
+I KNK ++ R K ++ DI QI PQ L+L+LR G QT + ++ EDYP+DL
Sbjct: 87 KDIKKNKNVT-NRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDL 145
Query: 136 YYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIAN 195
YYLMDLS SM DDL +K LG+ L EM ++TS+FR+GFGSFVEK V P++ TTP ++ N
Sbjct: 146 YYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRN 205
Query: 196 PCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEK 255
PC+S C F +K++L LTN E FNE+V Q+IS N+D+PEGGFDAIMQ AVC
Sbjct: 206 PCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSL 264
Query: 256 IGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQL 315
IGWRN + LLVF +DA HF D KL GIV+PNDG CHL++ N Y+MS +YP+I L
Sbjct: 265 IGWRNVT-RLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN-NMYTMSHYYDYPSIAHL 322
Query: 316 IDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEV 375
+ KL +NN+ IFAVT+E +Y+ LIP + VG L +S N++QLII AY L SEV
Sbjct: 323 VQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEV 382
Query: 376 ELEVLGDTEGLNLSFTAICNNGT--LFQHQKKCSHMKVGDTASFSVTVNIPHCERR-SRH 432
LE +EG+ +S+ + C NG ++ +KCS++ +GD F +++ C ++ S
Sbjct: 383 ILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDS 442
Query: 433 IIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCEC 492
I+P+G + +E+++ C C+CQ E S KCH GNG+F+CG C C+ G +G CEC
Sbjct: 443 FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCEC 502
Query: 493 GEDMLSTDS----CKEAPDHPSCSGRGDCYCGQCICHLSPYGN-IY-GPYCQCDNFSCVR 546
D ++++ C++ CS G+C CGQC+C N IY G +C+CDNF+C R
Sbjct: 503 STDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDR 562
Query: 547 HKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTN 606
GL+CGGNG C C C C +TG C+C+ T +C + +G +C+GRG C CG C CT+
Sbjct: 563 SNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTD 622
Query: 607 PGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEED----- 661
P G TCE C TC C + C++C G+ ++ C +C T E D
Sbjct: 623 PKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQP 682
Query: 662 FSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILL 721
D C + ++C F + + + ++H + +CP P+I I+ GV I+L
Sbjct: 683 VQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVL 742
Query: 722 IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQT 756
IG+ LL IWKLL+ HDR+E AKFE E+ AKW T
Sbjct: 743 IGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT 777
>gi|19743821 integrin beta 1 isoform 1C-2 precursor [Homo sapiens]
Length = 819
Score = 651 bits (1679), Expect = 0.0
Identities = 323/755 (42%), Positives = 448/755 (59%), Gaps = 25/755 (3%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPS-GVGERCDTPANLLAKGCQLNFIENPVSQ 81
C A++C +C+ GP C WC F RCD L KGC + IENP
Sbjct: 27 CLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGS 86
Query: 82 VEILKNKPLSVGRQKNSS------DIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDL 135
+I KNK ++ R K ++ DI QI PQ L+L+LR G QT + ++ EDYP+DL
Sbjct: 87 KDIKKNKNVT-NRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDL 145
Query: 136 YYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIAN 195
YYLMDLS SM DDL +K LG+ L EM ++TS+FR+GFGSFVEK V P++ TTP ++ N
Sbjct: 146 YYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPAKLRN 205
Query: 196 PCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEK 255
PC+S C F +K++L LTN E FNE+V Q+IS N+D+PEGGFDAIMQ AVC
Sbjct: 206 PCTS-EQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSL 264
Query: 256 IGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQL 315
IGWRN + LLVF +DA HF D KL GIV+PNDG CHL++ N Y+MS +YP+I L
Sbjct: 265 IGWRNVT-RLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLEN-NMYTMSHYYDYPSIAHL 322
Query: 316 IDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEV 375
+ KL +NN+ IFAVT+E +Y+ LIP + VG L +S N++QLII AY L SEV
Sbjct: 323 VQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEV 382
Query: 376 ELEVLGDTEGLNLSFTAICNNGT--LFQHQKKCSHMKVGDTASFSVTVNIPHCERR-SRH 432
LE +EG+ +S+ + C NG ++ +KCS++ +GD F +++ C ++ S
Sbjct: 383 ILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDS 442
Query: 433 IIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCEC 492
I+P+G + +E+++ C C+CQ E S KCH GNG+F+CG C C+ G +G CEC
Sbjct: 443 FKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCEC 502
Query: 493 GEDMLSTDS----CKEAPDHPSCSGRGDCYCGQCICHLSPYGN-IY-GPYCQCDNFSCVR 546
D ++++ C++ CS G+C CGQC+C N IY G +C+CDNF+C R
Sbjct: 503 STDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDR 562
Query: 547 HKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTN 606
GL+CGGNG C C C C +TG C+C+ T +C + +G +C+GRG C CG C CT+
Sbjct: 563 SNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTD 622
Query: 607 PGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEED----- 661
P G TCE C TC C + C++C G+ ++ C +C T E D
Sbjct: 623 PKFQGQTCEMCQTCLGVCAEHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQP 682
Query: 662 FSKDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILL 721
D C + ++C F + + + ++H + +CP P+I I+ GV I+L
Sbjct: 683 VQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVL 742
Query: 722 IGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQT 756
IG+ LL IWKLL+ HDR+E AKFE E+ AKW T
Sbjct: 743 IGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDT 777
>gi|4504777 integrin, beta 7 [Homo sapiens]
Length = 798
Score = 567 bits (1462), Expect = e-161
Identities = 305/775 (39%), Positives = 438/775 (56%), Gaps = 26/775 (3%)
Query: 15 RNDHVQGGCALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGE--RCDTPANLLAKGCQL 72
RN H+ + A +C+ C+L P CAWC Q NFT SG E RC LLA+GC L
Sbjct: 35 RNPHLSMLGSCQPAPSCQKCILSHPSCAWCKQLNFT-ASGEAEARRCARREELLARGCPL 93
Query: 73 NFIENPVSQVEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYP 132
+E P Q E+L+++PLS G + + Q+APQ + + LRPG Q LQV + E YP
Sbjct: 94 EELEEPRGQQEVLQDQPLSQGARGEGA--TQLAPQRVRVTLRPGEPQQLQVRFLRAEGYP 151
Query: 133 VDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEE 192
VDLYYLMDLS SM DDL +++LG L + ++T + R+GFGSFV+K V PFV T P +
Sbjct: 152 VDLYYLMDLSYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSK 211
Query: 193 IANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVC 252
+ +PC + C F F H+L LT DA+ F V Q +S N+D+PEGGFDAI+QAA+C
Sbjct: 212 LRHPCPTRLERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALC 271
Query: 253 KEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTI 312
+E+IGWRN S LLVF SD H D KL GI +P+DG CHLDS YS ST +YP++
Sbjct: 272 QEQIGWRNVS-RLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSV 330
Query: 313 GQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELR 372
GQ+ L N+ IFAVT + +Y+ +KLIP + VG L +DS N++QLI+ AY L
Sbjct: 331 GQVAQALSAANIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLS 390
Query: 373 SEVELEVLGDTEGLNLSFTAICNNGT----LFQHQKKCSHMKVGDTASFSVTVNIPHCER 428
S V LE G+++S+ + C + + +C+H+++ T +F V++ HC
Sbjct: 391 STVTLEHSSLPPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLP 450
Query: 429 RSRHIIIKPVGLGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGP 488
+ ++ +G + L + + C+C+C + + + C G G QCGVC+C PG +G
Sbjct: 451 EPHLLRLRALGFSEELIVELHTLCDCNC-SDTQPQAPHCSDGQGHLQCGVCSCAPGRLGR 509
Query: 489 RCECGEDMLST---DSCKEAPD--HPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFS 543
CEC LS+ +S AP+ P CSG+G C CG+C C G G C+CD+ S
Sbjct: 510 LCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCS----GQSSGHLCECDDAS 565
Query: 544 CVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCV 603
C RH+G+LCGG G C CG C C + TG C C+ DSC+S +G LCSG G C C +C
Sbjct: 566 CERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRCQ 625
Query: 604 CTNPGASGPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEEDFS 663
C + G G C++CP C PC R C EC G C C T++
Sbjct: 626 CLD-GYYGALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLA-LAPIL 683
Query: 664 KDGSVSCSLQGENECLITFLITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIG 723
DG C + + L FL+ D G T++ + ++ + I+LG I+ +G
Sbjct: 684 DDG--WCKERTLDNQLFFFLVEDDARG-TVVLRVRPQE-KGADHTQAIVLGCVGGIVAVG 739
Query: 724 VVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKNVTYKHRE 778
+ L+ ++L V +DR+E ++FE E+ + W+ +NPLY+ + +T N ++ +
Sbjct: 740 LGLVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRFQEAD 794
>gi|188595677 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 555 bits (1431), Expect = e-158
Identities = 298/761 (39%), Positives = 424/761 (55%), Gaps = 34/761 (4%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGE-RCDTPANLLAKGCQLNFIENPVSQ 81
C +C +C+ GP C WC + NFT P RCDT LL +GC + I +P S
Sbjct: 25 CTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSL 84
Query: 82 VEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDL 141
E ++ G QK Q++PQ + L LRPG A V R+ + YP+DLYYLMDL
Sbjct: 85 AETQEDHN---GGQK------QLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDL 135
Query: 142 SASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIP 201
S SM DDL +K+LG L + ++++T + R+GFGSFV+K V PFV T P+++ NPC +
Sbjct: 136 SYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKE 195
Query: 202 YFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRND 261
C P F F+H+L LTN++ +F V Q IS N+D PEGG DA+MQ A C E+IGWRN
Sbjct: 196 KECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRNV 255
Query: 262 SLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLVQ 321
+ LLVF +D HF D KL I+ PNDG CHL+ N Y S +YP++GQL KL +
Sbjct: 256 T-RLLVFATDDGFHFAGDGKLGAILTPNDGRCHLED-NLYKRSNEFDYPSVGQLAHKLAE 313
Query: 322 NNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEVLG 381
NN+ IFAVT V YE ++IP + VG L +DS N++QLI +AY +L S V L+
Sbjct: 314 NNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLDHNA 373
Query: 382 DTEGLNLSFTAICNNGTLFQHQKK--CSHMKVGDTASFSVTVNIPHCERRSRHIIIKPVG 439
+ L +++ + C+NG ++Q + C +++ +F V V C + + +I+ +G
Sbjct: 374 LPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATEC-IQEQSFVIRALG 432
Query: 440 LGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLST 499
D + + V P+C C C+ + + S C HG G +CG+C C G++G CEC S+
Sbjct: 433 FTDIVTVQVLPQCECRCRDQSR-DRSLC-HGKGFLECGICRCDTGYIGKNCECQTQGRSS 490
Query: 500 D----SCKEAPDHPSCSGRGDCYCGQCICHLS--PYGNIYGPYCQCDNFSCVRHKGLLCG 553
SC++ + CSG GDC CGQC+CH S P IYG YC+CD +C R+ G +CG
Sbjct: 491 QELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCG 550
Query: 554 --GNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASG 611
G G C CG+C C G+ G C C +T+ C++ V CSGRG C C C C + G
Sbjct: 551 GPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCEC-HSGYQL 609
Query: 612 PTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEEDFSKDGSVSCS 671
P C+ CP C PC SC EC G + C C G +S + +C
Sbjct: 610 PLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC--PGLQLSNNPVKGR----TCK 663
Query: 672 LQGENECLITF-LITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIGVVLLCIW 730
+ C + + L D + +I+ ++C PNI I+ G I+LIG++LL IW
Sbjct: 664 ERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIW 723
Query: 731 KLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKN 771
K L+ D +E +FE E+ K++W NPL++ +T+T N
Sbjct: 724 KALIHLSDLREYRRFEKEKLKSQW-NNDNPLFKSATTTVMN 763
>gi|89191865 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 555 bits (1431), Expect = e-158
Identities = 298/761 (39%), Positives = 424/761 (55%), Gaps = 34/761 (4%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGE-RCDTPANLLAKGCQLNFIENPVSQ 81
C +C +C+ GP C WC + NFT P RCDT LL +GC + I +P S
Sbjct: 25 CTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSL 84
Query: 82 VEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDL 141
E ++ G QK Q++PQ + L LRPG A V R+ + YP+DLYYLMDL
Sbjct: 85 AETQEDHN---GGQK------QLSPQKVTLYLRPGQAAAFNVTFRRAKGYPIDLYYLMDL 135
Query: 142 SASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIP 201
S SM DDL +K+LG L + ++++T + R+GFGSFV+K V PFV T P+++ NPC +
Sbjct: 136 SYSMLDDLRNVKKLGGDLLRALNEITESGRIGFGSFVDKTVLPFVNTHPDKLRNPCPNKE 195
Query: 202 YFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRND 261
C P F F+H+L LTN++ +F V Q IS N+D PEGG DA+MQ A C E+IGWRN
Sbjct: 196 KECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRNV 255
Query: 262 SLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLVQ 321
+ LLVF +D HF D KL I+ PNDG CHL+ N Y S +YP++GQL KL +
Sbjct: 256 T-RLLVFATDDGFHFAGDGKLGAILTPNDGRCHLED-NLYKRSNEFDYPSVGQLAHKLAE 313
Query: 322 NNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEVLG 381
NN+ IFAVT V YE ++IP + VG L +DS N++QLI +AY +L S V L+
Sbjct: 314 NNIQPIFAVTSRMVKTYEKLTEIIPKSAVGELSEDSSNVVQLIKNAYNKLSSRVFLDHNA 373
Query: 382 DTEGLNLSFTAICNNGTLFQHQKK--CSHMKVGDTASFSVTVNIPHCERRSRHIIIKPVG 439
+ L +++ + C+NG ++Q + C +++ +F V V C + + +I+ +G
Sbjct: 374 LPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQINVPITFQVKVTATEC-IQEQSFVIRALG 432
Query: 440 LGDALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLST 499
D + + V P+C C C+ + + S C HG G +CG+C C G++G CEC S+
Sbjct: 433 FTDIVTVQVLPQCECRCRDQSR-DRSLC-HGKGFLECGICRCDTGYIGKNCECQTQGRSS 490
Query: 500 D----SCKEAPDHPSCSGRGDCYCGQCICHLS--PYGNIYGPYCQCDNFSCVRHKGLLCG 553
SC++ + CSG GDC CGQC+CH S P IYG YC+CD +C R+ G +CG
Sbjct: 491 QELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCG 550
Query: 554 --GNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASG 611
G G C CG+C C G+ G C C +T+ C++ V CSGRG C C C C + G
Sbjct: 551 GPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRCNVCEC-HSGYQL 609
Query: 612 PTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEEDFSKDGSVSCS 671
P C+ CP C PC SC EC G + C C G +S + +C
Sbjct: 610 PLCQECPGCPSPCGKYISCAECLKFEKGPFGKNCSAAC--PGLQLSNNPVKGR----TCK 663
Query: 672 LQGENECLITF-LITTDNEGKTIIHSINEKDCPKPPNIPMIMLGVSLAILLIGVVLLCIW 730
+ C + + L D + +I+ ++C PNI I+ G I+LIG++LL IW
Sbjct: 664 ERDSEGCWVAYTLEQQDGMDRYLIYVDESRECVAGPNIAAIVGGTVAGIVLIGILLLVIW 723
Query: 731 KLLVSFHDRKEVAKFEAERSKAKWQTGTNPLYRGSTSTFKN 771
K L+ D +E +FE E+ K++W NPL++ +T+T N
Sbjct: 724 KALIHLSDLREYRRFEKEKLKSQW-NNDNPLFKSATTTVMN 763
>gi|4504779 integrin, beta 8 precursor [Homo sapiens]
Length = 769
Score = 540 bits (1390), Expect = e-153
Identities = 270/691 (39%), Positives = 392/691 (56%), Gaps = 42/691 (6%)
Query: 8 LFFLFLGRNDHVQGGCALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCDTPANLLA 67
+F L LG CA A +C CL +GP+C WC QE+F ERCD +NL++
Sbjct: 32 VFSLVLGLGQGEDNRCASSNAASCARCLALGPECGWCVQEDFISGGSRSERCDIVSNLIS 91
Query: 68 KGCQLNFIENPVSQVEILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQ 127
KGC ++ IE P V I ++ Q+ P + ++LRPG + V
Sbjct: 92 KGCSVDSIEYPSVHVIIPTENEINT----------QVTPGEVSIQLRPGAEANFMLKVHP 141
Query: 128 TEDYPVDLYYLMDLSASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVK 187
+ YPVDLYYL+D+SASM +++ + +G+ LS++M+ + +FRLGFGS+V+K VSP++
Sbjct: 142 LKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYIS 201
Query: 188 TTPEEIANPCSSIPYFCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIM 247
PE I N CS C+P G+ H+L LT + F + V QKIS NIDTPEGGFDA++
Sbjct: 202 IHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKAVHRQKISGNIDTPEGGFDAML 261
Query: 248 QAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGLCHLDSKNEYSMSTVL 307
QAAVC+ IGWR ++ LL+ ++D SH +DSKLAGIV+PNDG CHL N Y ST +
Sbjct: 262 QAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIVVPNDGNCHL-KNNVYVKSTTM 320
Query: 308 EYPTIGQLIDKLVQNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISA 367
E+P++GQL +KL+ NN+ +IFAV +Q H Y++ L+PG G ++ + N+ L++ A
Sbjct: 321 EHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPGTIAGEIESKAANLNNLVVEA 380
Query: 368 YEELRSEVELEVLGDTEGLNLSFTAICNNGTLFQHQKKCSHMKVGDTASFSVTVNIPHCE 427
Y++L SEV+++V +G+ + TAIC +G+ + C ++ D F+VTV + C+
Sbjct: 381 YQKLISEVKVQVENQVQGIYFNITAICPDGSRKPGMEGCRNVTSNDEVLFNVTVTMKKCD 440
Query: 428 --RRSRHIIIKPVGLGDALELLVSPECNCDCQK---------EVEVNSSKCHHGNGSFQC 476
+ IIKP+G + ++ + C+C C+ + SKC FQC
Sbjct: 441 VTGGKNYAIIKPIGFNETAKIHIHRNCSCQCEDNRGPKGKCVDETFLDSKC------FQC 494
Query: 477 GVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPY 536
CH ED S++SCK D P CSGRG C CG+C CH G +YG Y
Sbjct: 495 DENKCH---------FDEDQFSSESCKSHKDQPVCSGRGVCVCGKCSCHKIKLGKVYGKY 545
Query: 537 CQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNC-TTSTDSCVSEDGVLCSGRG 595
C+ D+FSC H G LC G+G+C+ G C C SGW G+ C C + + CV+ G +CSGRG
Sbjct: 546 CEKDDFSCPYHHGNLCAGHGECEAGRCQCFSGWEGDRCQCPSAAAQHCVNSKGQVCSGRG 605
Query: 596 DCVCGKCVCTNPGASGPTCERCPTCGDPCNSKRSCIEC-HLSAAGQAREECVDKCKLAGA 654
CVCG+C CT+P + G CE CPTC C +C++C H QA +D+CK + A
Sbjct: 606 TCVCGRCECTDPRSIGRFCEHCPTCYTACKENWNCMQCLHPHNLSQA---ILDQCKTSCA 662
Query: 655 TISEEEDFSKDGSVSCSLQGENECLITFLIT 685
+ ++ + S I F++T
Sbjct: 663 LMEQQHYVDQTSECFSSPSYLRIFFIIFIVT 693
>gi|54607027 integrin beta 4 isoform 2 precursor [Homo sapiens]
Length = 1805
Score = 433 bits (1113), Expect = e-121
Identities = 248/733 (33%), Positives = 385/733 (52%), Gaps = 52/733 (7%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCDTPANLLAKGCQLNFIENPVSQV 82
C ++C +C+ + CA+C E F RC+T A LLA GCQ I S
Sbjct: 30 CKKAPVKSCTECVRVDKDCAYCTDEMFRD-----RRCNTQAELLAAGCQRESIVVMESSF 84
Query: 83 EILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDLS 142
+I + + +++ Q++PQ L ++LRPG + ++ V + + PVDLY LMD S
Sbjct: 85 QITEETQIDTTLRRS-----QMSPQGLRVRLRPGEERHFELEVFEPLESPVDLYILMDFS 139
Query: 143 ASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIPY 202
SM DDL+ +K++G L++ +S+LTS++ +GFG FV+K P PE++ P +
Sbjct: 140 NSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDKVSVPQTDMRPEKLKEPWPNSD- 198
Query: 203 FCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRNDS 262
P F FK+++ LT D + F ++ ++IS N+D PEGGFDAI+Q AVC IGWR DS
Sbjct: 199 ---PPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPEGGFDAILQTAVCTRDIGWRPDS 255
Query: 263 LHLLVFVSDADSHFGMDSK--LAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLV 320
HLLVF +++ H+ D LAGI+ ND CHLD+ Y+ +YP++ L+ L
Sbjct: 256 THLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLA 315
Query: 321 QNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEVL 380
++N++ IFAVT YE P +++G+LQ+DS NI++L+ A+ +RS +++ L
Sbjct: 316 KHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLDIRAL 375
Query: 381 GDTEGLNLSFTAICNNGTLFQHQKKCS-HMKVGDTASFSVTVN-IPHC---------ERR 429
GL T+ +FQ + S H++ G+ + V + + H E +
Sbjct: 376 DSPRGLRTEVTS-----KMFQKTRTGSFHIRRGEVGIYQVQLRALEHVDGTHVCQLPEDQ 430
Query: 430 SRHIIIKPVGLGDALELLVSPECN-CDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGP 488
+I +KP D L++ C+ C C+ + EV S++C NG F CG C C G G
Sbjct: 431 KGNIHLKP-SFSDGLKMDAGIICDVCTCELQKEVRSARCSF-NGDFVCGQCVCSEGWSGQ 488
Query: 489 RCECGEDMLST--DSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVR 546
C C LS +E D P CSGRG+C CG C+C+ G G +C+ DNF C R
Sbjct: 489 TCNCSTGSLSDIQPCLREGEDKP-CSGRGECQCGHCVCYGE--GRYEGQFCEYDNFQCPR 545
Query: 547 HKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTN 606
G LC G C G+CVC GWTG C+C S +C+ +G +C+GRG C CG+C C
Sbjct: 546 TSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNATCIDSNGGICNGRGHCECGRCHCHQ 605
Query: 607 PGASGPT-CERCPTCGDP--CNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEEDFS 663
T CE + P C RSC++C G+ + ++C + E + +
Sbjct: 606 QSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGEKKGRTCEECNFKVKMVDELKR-A 664
Query: 664 KDGSVSCSLQGE-NECLITFLITTDN----EGKTIIHSINEKDCPKPPNIPMIMLGVSLA 718
++ V CS + E ++C ++ + D ++H +KDCP P + ++ + L
Sbjct: 665 EEVVVRCSFRDEDDDCTYSYTMEGDGAPGPNSTVLVH--KKKDCP-PGSFWWLIPLLLLL 721
Query: 719 ILLIGVVLLCIWK 731
+ L+ ++LL WK
Sbjct: 722 LPLLALLLLLCWK 734
>gi|54607035 integrin beta 4 isoform 1 precursor [Homo sapiens]
Length = 1822
Score = 433 bits (1113), Expect = e-121
Identities = 248/733 (33%), Positives = 385/733 (52%), Gaps = 52/733 (7%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCDTPANLLAKGCQLNFIENPVSQV 82
C ++C +C+ + CA+C E F RC+T A LLA GCQ I S
Sbjct: 30 CKKAPVKSCTECVRVDKDCAYCTDEMFRD-----RRCNTQAELLAAGCQRESIVVMESSF 84
Query: 83 EILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDLS 142
+I + + +++ Q++PQ L ++LRPG + ++ V + + PVDLY LMD S
Sbjct: 85 QITEETQIDTTLRRS-----QMSPQGLRVRLRPGEERHFELEVFEPLESPVDLYILMDFS 139
Query: 143 ASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIPY 202
SM DDL+ +K++G L++ +S+LTS++ +GFG FV+K P PE++ P +
Sbjct: 140 NSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDKVSVPQTDMRPEKLKEPWPNSD- 198
Query: 203 FCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRNDS 262
P F FK+++ LT D + F ++ ++IS N+D PEGGFDAI+Q AVC IGWR DS
Sbjct: 199 ---PPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPEGGFDAILQTAVCTRDIGWRPDS 255
Query: 263 LHLLVFVSDADSHFGMDSK--LAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLV 320
HLLVF +++ H+ D LAGI+ ND CHLD+ Y+ +YP++ L+ L
Sbjct: 256 THLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLA 315
Query: 321 QNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEVL 380
++N++ IFAVT YE P +++G+LQ+DS NI++L+ A+ +RS +++ L
Sbjct: 316 KHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLDIRAL 375
Query: 381 GDTEGLNLSFTAICNNGTLFQHQKKCS-HMKVGDTASFSVTVN-IPHC---------ERR 429
GL T+ +FQ + S H++ G+ + V + + H E +
Sbjct: 376 DSPRGLRTEVTS-----KMFQKTRTGSFHIRRGEVGIYQVQLRALEHVDGTHVCQLPEDQ 430
Query: 430 SRHIIIKPVGLGDALELLVSPECN-CDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGP 488
+I +KP D L++ C+ C C+ + EV S++C NG F CG C C G G
Sbjct: 431 KGNIHLKP-SFSDGLKMDAGIICDVCTCELQKEVRSARCSF-NGDFVCGQCVCSEGWSGQ 488
Query: 489 RCECGEDMLST--DSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVR 546
C C LS +E D P CSGRG+C CG C+C+ G G +C+ DNF C R
Sbjct: 489 TCNCSTGSLSDIQPCLREGEDKP-CSGRGECQCGHCVCYGE--GRYEGQFCEYDNFQCPR 545
Query: 547 HKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTN 606
G LC G C G+CVC GWTG C+C S +C+ +G +C+GRG C CG+C C
Sbjct: 546 TSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNATCIDSNGGICNGRGHCECGRCHCHQ 605
Query: 607 PGASGPT-CERCPTCGDP--CNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEEDFS 663
T CE + P C RSC++C G+ + ++C + E + +
Sbjct: 606 QSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGEKKGRTCEECNFKVKMVDELKR-A 664
Query: 664 KDGSVSCSLQGE-NECLITFLITTDN----EGKTIIHSINEKDCPKPPNIPMIMLGVSLA 718
++ V CS + E ++C ++ + D ++H +KDCP P + ++ + L
Sbjct: 665 EEVVVRCSFRDEDDDCTYSYTMEGDGAPGPNSTVLVH--KKKDCP-PGSFWWLIPLLLLL 721
Query: 719 ILLIGVVLLCIWK 731
+ L+ ++LL WK
Sbjct: 722 LPLLALLLLLCWK 734
>gi|54607033 integrin beta 4 isoform 3 precursor [Homo sapiens]
Length = 1752
Score = 433 bits (1113), Expect = e-121
Identities = 248/733 (33%), Positives = 385/733 (52%), Gaps = 52/733 (7%)
Query: 23 CALGGAETCEDCLLIGPQCAWCAQENFTHPSGVGERCDTPANLLAKGCQLNFIENPVSQV 82
C ++C +C+ + CA+C E F RC+T A LLA GCQ I S
Sbjct: 30 CKKAPVKSCTECVRVDKDCAYCTDEMFRD-----RRCNTQAELLAAGCQRESIVVMESSF 84
Query: 83 EILKNKPLSVGRQKNSSDIVQIAPQSLILKLRPGGAQTLQVHVRQTEDYPVDLYYLMDLS 142
+I + + +++ Q++PQ L ++LRPG + ++ V + + PVDLY LMD S
Sbjct: 85 QITEETQIDTTLRRS-----QMSPQGLRVRLRPGEERHFELEVFEPLESPVDLYILMDFS 139
Query: 143 ASMDDDLNTIKELGSRLSKEMSKLTSNFRLGFGSFVEKPVSPFVKTTPEEIANPCSSIPY 202
SM DDL+ +K++G L++ +S+LTS++ +GFG FV+K P PE++ P +
Sbjct: 140 NSMSDDLDNLKKMGQNLARVLSQLTSDYTIGFGKFVDKVSVPQTDMRPEKLKEPWPNSD- 198
Query: 203 FCLPTFGFKHILPLTNDAERFNEIVKNQKISANIDTPEGGFDAIMQAAVCKEKIGWRNDS 262
P F FK+++ LT D + F ++ ++IS N+D PEGGFDAI+Q AVC IGWR DS
Sbjct: 199 ---PPFSFKNVISLTEDVDEFRNKLQGERISGNLDAPEGGFDAILQTAVCTRDIGWRPDS 255
Query: 263 LHLLVFVSDADSHFGMDSK--LAGIVIPNDGLCHLDSKNEYSMSTVLEYPTIGQLIDKLV 320
HLLVF +++ H+ D LAGI+ ND CHLD+ Y+ +YP++ L+ L
Sbjct: 256 THLLVFSTESAFHYEADGANVLAGIMSRNDERCHLDTTGTYTQYRTQDYPSVPTLVRLLA 315
Query: 321 QNNVLLIFAVTQEQVHLYENYAKLIPGATVGLLQKDSGNILQLIISAYEELRSEVELEVL 380
++N++ IFAVT YE P +++G+LQ+DS NI++L+ A+ +RS +++ L
Sbjct: 316 KHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLEEAFNRIRSNLDIRAL 375
Query: 381 GDTEGLNLSFTAICNNGTLFQHQKKCS-HMKVGDTASFSVTVN-IPHC---------ERR 429
GL T+ +FQ + S H++ G+ + V + + H E +
Sbjct: 376 DSPRGLRTEVTS-----KMFQKTRTGSFHIRRGEVGIYQVQLRALEHVDGTHVCQLPEDQ 430
Query: 430 SRHIIIKPVGLGDALELLVSPECN-CDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGP 488
+I +KP D L++ C+ C C+ + EV S++C NG F CG C C G G
Sbjct: 431 KGNIHLKP-SFSDGLKMDAGIICDVCTCELQKEVRSARCSF-NGDFVCGQCVCSEGWSGQ 488
Query: 489 RCECGEDMLST--DSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVR 546
C C LS +E D P CSGRG+C CG C+C+ G G +C+ DNF C R
Sbjct: 489 TCNCSTGSLSDIQPCLREGEDKP-CSGRGECQCGHCVCYGE--GRYEGQFCEYDNFQCPR 545
Query: 547 HKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTN 606
G LC G C G+CVC GWTG C+C S +C+ +G +C+GRG C CG+C C
Sbjct: 546 TSGFLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNATCIDSNGGICNGRGHCECGRCHCHQ 605
Query: 607 PGASGPT-CERCPTCGDP--CNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEEDFS 663
T CE + P C RSC++C G+ + ++C + E + +
Sbjct: 606 QSLYTDTICEINYSAIHPGLCEDLRSCVQCQAWGTGEKKGRTCEECNFKVKMVDELKR-A 664
Query: 664 KDGSVSCSLQGE-NECLITFLITTDN----EGKTIIHSINEKDCPKPPNIPMIMLGVSLA 718
++ V CS + E ++C ++ + D ++H +KDCP P + ++ + L
Sbjct: 665 EEVVVRCSFRDEDDDCTYSYTMEGDGAPGPNSTVLVH--KKKDCP-PGSFWWLIPLLLLL 721
Query: 719 ILLIGVVLLCIWK 731
+ L+ ++LL WK
Sbjct: 722 LPLLALLLLLCWK 734
>gi|4758614 integrin, beta-like 1 (with EGF-like repeat domains)
[Homo sapiens]
Length = 494
Score = 139 bits (349), Expect = 1e-32
Identities = 68/170 (40%), Positives = 89/170 (52%), Gaps = 17/170 (10%)
Query: 452 CNCD---CQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDML-----STDSCK 503
C CD C+ + S G+G CG C C G G +CE + S C+
Sbjct: 269 CECDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQ 328
Query: 504 EAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGEC 563
+ D P CSGRG C CG+C C+ +YG C+CD+ C G++CGG+G C CG C
Sbjct: 329 GSSDLP-CSGRGKCECGKCTCYPPGDRRVYGKTCECDDRRCEDLDGVVCGGHGTCSCGRC 387
Query: 564 VCRSGWTGEY------CNCT--TSTDSCVSEDGVLCSGRGDCVCGKCVCT 605
VC GW G+ CN T S + C S DG+LCSG+G C CGKC+C+
Sbjct: 388 VCERGWFGKLCQHPRKCNMTEEQSKNLCESADGILCSGKGSCHCGKCICS 437
Score = 137 bits (344), Expect = 5e-32
Identities = 75/215 (34%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 442 DALELLVSPECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDS 501
D L+ C CD ++ ++ + + G+G CG C C G G +CE D+ +S
Sbjct: 168 DGSGLVYGKFCECDDRECIDDETEEICGGHGKCYCGNCYCKAGWHGDKCEFQCDITPWES 227
Query: 502 CKE--APDHPSCSGRGDCYCGQCICH----LSPYGNIYGPYCQCDNFSCV----RHKGLL 551
+ +PD CS RG C CG+C CH +G+I+G C+CD C R+
Sbjct: 228 KRRCTSPDGKICSNRGTCVCGECTCHDVDPTGDWGDIHGDTCECDERDCRAVYDRYSDDF 287
Query: 552 CGGNGDCDCGECVCRSGWTGEYC----NCTTSTDS----CVSEDGVLCSGRGDCVCGKCV 603
C G+G C+CG C C++GW G+ C +CT S + C + CSGRG C CGKC
Sbjct: 288 CSGHGQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESIRKCQGSSDLPCSGRGKCECGKCT 347
Query: 604 CTNPG---ASGPTCE----RCPTC-GDPCNSKRSC 630
C PG G TCE RC G C +C
Sbjct: 348 CYPPGDRRVYGKTCECDDRRCEDLDGVVCGGHGTC 382
Score = 125 bits (314), Expect = 2e-28
Identities = 85/259 (32%), Positives = 116/259 (44%), Gaps = 38/259 (14%)
Query: 454 CDCQKEV-EVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDM-----LSTDSCKEAPD 507
C+C + V E G+G CG C C G G C+ + S CK + D
Sbjct: 89 CECHEWVCETYDGSTCAGHGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQD 148
Query: 508 HPSCSGRGDCYCGQCICHLSP-YGNIYGPYCQCDNFSCVRHKGL-LCGGNGDCDCGECVC 565
CS G C+CG+C C S G +YG +C+CD+ C+ + +CGG+G C CG C C
Sbjct: 149 I-ICSNAGTCHCGRCKCDNSDGSGLVYGKFCECDDRECIDDETEEICGGHGKCYCGNCYC 207
Query: 566 RSGWTGEYCNCTT------STDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERCPT 619
++GW G+ C S C S DG +CS RG CVCG+C C + PT +
Sbjct: 208 KAGWHGDKCEFQCDITPWESKRRCTSPDGKICSNRGTCVCGECTCHD---VDPTGDWGDI 264
Query: 620 CGDPCN-SKRSCIECH-------LSAAGQ---AREECV-----DKCK-LAGATISEEEDF 662
GD C +R C + S GQ R +C KC+ T+S EE
Sbjct: 265 HGDTCECDERDCRAVYDRYSDDFCSGHGQCNCGRCDCKAGWYGKKCEHPQSCTLSAEESI 324
Query: 663 SK---DGSVSCSLQGENEC 678
K + CS +G+ EC
Sbjct: 325 RKCQGSSDLPCSGRGKCEC 343
Score = 118 bits (296), Expect = 2e-26
Identities = 68/215 (31%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 488 PRCECGEDMLSTDSCKEAPDHPS----CSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFS 543
P C ++ AP P C GRG C CG CICH++ G +GP C+C +
Sbjct: 36 PGAACRLSRAESERRCRAPGQPPGAALCHGRGRCDCGVCICHVTEPGMFFGPLCECHEWV 95
Query: 544 CVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTD--------SCVSEDGVLCSGRG 595
C + G C G+G CDCG+C C GW G+ C T+ D C + ++CS G
Sbjct: 96 CETYDGSTCAGHGKCDCGKCKCDQGWYGDACQYPTNCDLTKKKSNQMCKNSQDIICSNAG 155
Query: 596 DCVCGKCVCTNPGASGPTCERCPTCGD-PC-----------NSKRSCIECHLSAAGQARE 643
C CG+C C N SG + C D C + K C C+ AG +
Sbjct: 156 TCHCGRCKCDNSDGSGLVYGKFCECDDRECIDDETEEICGGHGKCYCGNCYCK-AGWHGD 214
Query: 644 ECVDKCKLAGATISEEEDFSKDGSVSCSLQGENEC 678
+C +C + S+ S DG + CS +G C
Sbjct: 215 KCEFQCDIT-PWESKRRCTSPDGKI-CSNRGTCVC 247
Score = 107 bits (267), Expect = 4e-23
Identities = 48/127 (37%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 452 CNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCE----CGEDMLSTDSCKEAPD 507
C CD ++ +++ C G+G+ CG C C G G C+ C + + E+ D
Sbjct: 361 CECDDRRCEDLDGVVCG-GHGTCSCGRCVCERGWFGKLCQHPRKCNMTEEQSKNLCESAD 419
Query: 508 HPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRS 567
CSG+G C+CG+CIC + I G +C CD+ C +H GL+C GNG C CG C C
Sbjct: 420 GILCSGKGSCHCGKCICSAEEW-YISGEFCDCDDRDCDKHDGLICTGNGICSCGNCECWD 478
Query: 568 GWTGEYC 574
GW G C
Sbjct: 479 GWNGNAC 485
>gi|169790825 odz, odd Oz/ten-m homolog 4 [Homo sapiens]
Length = 2769
Score = 95.5 bits (236), Expect = 2e-19
Identities = 62/187 (33%), Positives = 81/187 (43%), Gaps = 32/187 (17%)
Query: 498 STDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGD 557
S D+C +C G GDC G C C L GP C SC +LC GNG
Sbjct: 562 SVDNCPS-----NCYGNGDCISGTCHCFLG----FLGP--DCGRASCP----VLCSGNGQ 606
Query: 558 CDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERC 617
G C+C SGW G C T+ C+ V CS G C+ G C+C NPG G +CE
Sbjct: 607 YMKGRCLCHSGWKG--AECDVPTNQCID---VACSNHGTCITGTCIC-NPGYKGESCEEV 660
Query: 618 PTCGDPCNSKRSCI--ECHLSA------AGQAREECVDKCKLAGATISEEEDFSKDGSVS 669
C+ + C+ ECH S R C+D+C G + + S D S +
Sbjct: 661 DCMDPTCSGRGVCVRGECHCSVGWGGTNCETPRATCLDQCSGHGTFLPDTGLCSCDPSWT 720
Query: 670 ---CSLQ 673
CS++
Sbjct: 721 GHDCSIE 727
Score = 79.7 bits (195), Expect = 1e-14
Identities = 54/162 (33%), Positives = 66/162 (40%), Gaps = 29/162 (17%)
Query: 465 SKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCIC 524
S C+ GNG G C C G +GP C SC CSG G G+C+C
Sbjct: 568 SNCY-GNGDCISGTCHCFLGFLGPDC-------GRASCPVL-----CSGNGQYMKGRCLC 614
Query: 525 HLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCV 584
H G C C+ + C +G C G C+C G+ GE C D
Sbjct: 615 H----SGWKGAECDVPTNQCI---DVACSNHGTCITGTCICNPGYKGESCEEVDCMDP-- 665
Query: 585 SEDGVLCSGRGDCVCGKCVCTNPGASGPTCER-CPTCGDPCN 625
CSGRG CV G+C C + G G CE TC D C+
Sbjct: 666 -----TCSGRGVCVRGECHC-SVGWGGTNCETPRATCLDQCS 701
Score = 66.6 bits (161), Expect = 8e-11
Identities = 60/217 (27%), Positives = 79/217 (36%), Gaps = 52/217 (23%)
Query: 448 VSPECNC-------DCQKEVEVNSSKCHHGNGSF--QCGVCACHPGHMGPRCECGEDMLS 498
V EC+C +C+ +C G+G+F G+C+C P G C S
Sbjct: 674 VRGECHCSVGWGGTNCETPRATCLDQCS-GHGTFLPDTGLCSCDPSWTGHDC-------S 725
Query: 499 TDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDC 558
+ C C G G C G C C G CD +C C +G C
Sbjct: 726 IEICAA-----DCGGHGVCVGGTCRCEDGWMG------AACDQRACHPR----CAEHGTC 770
Query: 559 DCGECVCRSGWTGEYCNCTTSTDSCVSED-GVLCSGRGDCVCG----KCVCTNPGASGPT 613
G+C C GW GE+C D V E LC+G G C CVC G G
Sbjct: 771 RDGKCECSPGWNGEHCTIAHYLDRVVKEGCPGLCNGNGRCTLDLNGWHCVC-QLGWRGAG 829
Query: 614 CERC--PTCGD----------PCNSKRSCIE--CHLS 636
C+ CGD C C++ CH++
Sbjct: 830 CDTSMETACGDSKDNDGDGLVDCMDPDCCLQPLCHIN 866
>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
Length = 2725
Score = 87.8 bits (216), Expect = 4e-17
Identities = 50/130 (38%), Positives = 64/130 (49%), Gaps = 20/130 (15%)
Query: 510 SCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGW 569
+C+G G+C G C C + GP C D SC +LCGGNG+ + G CVCR GW
Sbjct: 535 NCNGNGECISGHCHC----FPGFLGPDCARD--SCP----VLCGGNGEYEKGHCVCRHGW 584
Query: 570 TGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERCPTCGDP-CNSKR 628
G C + C+ C G G C+ G C+C PG G CE C DP C++
Sbjct: 585 KGP--ECDVPEEQCIDP---TCFGHGTCIMGVCICV-PGYKGEICEE-EDCLDPMCSNHG 637
Query: 629 SCI--ECHLS 636
C+ ECH S
Sbjct: 638 ICVKGECHCS 647
Score = 81.3 bits (199), Expect = 3e-15
Identities = 53/163 (32%), Positives = 70/163 (42%), Gaps = 29/163 (17%)
Query: 464 SSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCI 523
S+ C+ GNG G C C PG +GP C + DSC C G G+ G C+
Sbjct: 533 STNCN-GNGECISGHCHCFPGFLGPDC-------ARDSCPVL-----CGGNGEYEKGHCV 579
Query: 524 CHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSC 583
C GP C C+ C G+G C G C+C G+ GE C + C
Sbjct: 580 CR----HGWKGPECDVPEEQCIDPT---CFGHGTCIMGVCICVPGYKGEIC----EEEDC 628
Query: 584 VSEDGVLCSGRGDCVCGKCVCTNPGASGPTCER-CPTCGDPCN 625
+ +CS G CV G+C C+ G G CE P C + C+
Sbjct: 629 LDP---MCSNHGICVKGECHCST-GWGGVNCETPLPVCQEQCS 667
Score = 73.6 bits (179), Expect = 7e-13
Identities = 67/229 (29%), Positives = 87/229 (37%), Gaps = 52/229 (22%)
Query: 446 LLVSPECNC-------DCQKEVEVNSSKCH-HGNGSFQCGVCACHPGHMGPRCECGEDML 497
+ V EC+C +C+ + V +C HG GVC+C P G C
Sbjct: 638 ICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDC------- 690
Query: 498 STDSCK-EAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNG 556
ST+ C E H CS RG C C + GP C+ SC H C +G
Sbjct: 691 STELCTMECGSHGVCS-RGICQCEE---------GWVGP--TCEERSCHSH----CTEHG 734
Query: 557 DCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGK----CVCTNPGASGP 612
C G+C C GW G++C D+ LC G G C + CVC G SG
Sbjct: 735 QCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVC-QVGWSGT 793
Query: 613 TCERC--PTCGDPCNSKRSCIECHLSAAGQAREECVDK--CKLAGATIS 657
C CGD +L G +CVD C+ + IS
Sbjct: 794 GCNVVMEMLCGD-----------NLDNDGDGLTDCVDPDCCQQSNCYIS 831
>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
Length = 2731
Score = 87.8 bits (216), Expect = 4e-17
Identities = 50/130 (38%), Positives = 64/130 (49%), Gaps = 20/130 (15%)
Query: 510 SCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGW 569
+C+G G+C G C C + GP C D SC +LCGGNG+ + G CVCR GW
Sbjct: 534 NCNGNGECISGHCHC----FPGFLGPDCARD--SCP----VLCGGNGEYEKGHCVCRHGW 583
Query: 570 TGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERCPTCGDP-CNSKR 628
G C + C+ C G G C+ G C+C PG G CE C DP C++
Sbjct: 584 KGP--ECDVPEEQCIDP---TCFGHGTCIMGVCICV-PGYKGEICEE-EDCLDPMCSNHG 636
Query: 629 SCI--ECHLS 636
C+ ECH S
Sbjct: 637 ICVKGECHCS 646
Score = 81.3 bits (199), Expect = 3e-15
Identities = 53/163 (32%), Positives = 70/163 (42%), Gaps = 29/163 (17%)
Query: 464 SSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCI 523
S+ C+ GNG G C C PG +GP C + DSC C G G+ G C+
Sbjct: 532 STNCN-GNGECISGHCHCFPGFLGPDC-------ARDSCPVL-----CGGNGEYEKGHCV 578
Query: 524 CHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSC 583
C GP C C+ C G+G C G C+C G+ GE C + C
Sbjct: 579 CR----HGWKGPECDVPEEQCIDPT---CFGHGTCIMGVCICVPGYKGEIC----EEEDC 627
Query: 584 VSEDGVLCSGRGDCVCGKCVCTNPGASGPTCER-CPTCGDPCN 625
+ +CS G CV G+C C+ G G CE P C + C+
Sbjct: 628 LDP---MCSNHGICVKGECHCST-GWGGVNCETPLPVCQEQCS 666
Score = 73.6 bits (179), Expect = 7e-13
Identities = 67/229 (29%), Positives = 87/229 (37%), Gaps = 52/229 (22%)
Query: 446 LLVSPECNC-------DCQKEVEVNSSKCH-HGNGSFQCGVCACHPGHMGPRCECGEDML 497
+ V EC+C +C+ + V +C HG GVC+C P G C
Sbjct: 637 ICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDC------- 689
Query: 498 STDSCK-EAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNG 556
ST+ C E H CS RG C C + GP C+ SC H C +G
Sbjct: 690 STELCTMECGSHGVCS-RGICQCEE---------GWVGP--TCEERSCHSH----CTEHG 733
Query: 557 DCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGK----CVCTNPGASGP 612
C G+C C GW G++C D+ LC G G C + CVC G SG
Sbjct: 734 QCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVC-QVGWSGT 792
Query: 613 TCERC--PTCGDPCNSKRSCIECHLSAAGQAREECVDK--CKLAGATIS 657
C CGD +L G +CVD C+ + IS
Sbjct: 793 GCNVVMEMLCGD-----------NLDNDGDGLTDCVDPDCCQQSNCYIS 830
>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
Length = 2732
Score = 87.8 bits (216), Expect = 4e-17
Identities = 50/130 (38%), Positives = 64/130 (49%), Gaps = 20/130 (15%)
Query: 510 SCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGW 569
+C+G G+C G C C + GP C D SC +LCGGNG+ + G CVCR GW
Sbjct: 535 NCNGNGECISGHCHC----FPGFLGPDCARD--SCP----VLCGGNGEYEKGHCVCRHGW 584
Query: 570 TGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERCPTCGDP-CNSKR 628
G C + C+ C G G C+ G C+C PG G CE C DP C++
Sbjct: 585 KGP--ECDVPEEQCIDP---TCFGHGTCIMGVCICV-PGYKGEICEE-EDCLDPMCSNHG 637
Query: 629 SCI--ECHLS 636
C+ ECH S
Sbjct: 638 ICVKGECHCS 647
Score = 81.3 bits (199), Expect = 3e-15
Identities = 53/163 (32%), Positives = 70/163 (42%), Gaps = 29/163 (17%)
Query: 464 SSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCI 523
S+ C+ GNG G C C PG +GP C + DSC C G G+ G C+
Sbjct: 533 STNCN-GNGECISGHCHCFPGFLGPDC-------ARDSCPVL-----CGGNGEYEKGHCV 579
Query: 524 CHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSC 583
C GP C C+ C G+G C G C+C G+ GE C + C
Sbjct: 580 CR----HGWKGPECDVPEEQCIDPT---CFGHGTCIMGVCICVPGYKGEIC----EEEDC 628
Query: 584 VSEDGVLCSGRGDCVCGKCVCTNPGASGPTCER-CPTCGDPCN 625
+ +CS G CV G+C C+ G G CE P C + C+
Sbjct: 629 LDP---MCSNHGICVKGECHCST-GWGGVNCETPLPVCQEQCS 667
Score = 73.6 bits (179), Expect = 7e-13
Identities = 67/229 (29%), Positives = 87/229 (37%), Gaps = 52/229 (22%)
Query: 446 LLVSPECNC-------DCQKEVEVNSSKCH-HGNGSFQCGVCACHPGHMGPRCECGEDML 497
+ V EC+C +C+ + V +C HG GVC+C P G C
Sbjct: 638 ICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCDPKWTGSDC------- 690
Query: 498 STDSCK-EAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNG 556
ST+ C E H CS RG C C + GP C+ SC H C +G
Sbjct: 691 STELCTMECGSHGVCS-RGICQCEE---------GWVGP--TCEERSCHSH----CTEHG 734
Query: 557 DCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGK----CVCTNPGASGP 612
C G+C C GW G++C D+ LC G G C + CVC G SG
Sbjct: 735 QCKDGKCECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVC-QVGWSGT 793
Query: 613 TCERC--PTCGDPCNSKRSCIECHLSAAGQAREECVDK--CKLAGATIS 657
C CGD +L G +CVD C+ + IS
Sbjct: 794 GCNVVMEMLCGD-----------NLDNDGDGLTDCVDPDCCQQSNCYIS 831
>gi|122937400 odz, odd Oz/ten-m homolog 3 [Homo sapiens]
Length = 2699
Score = 87.4 bits (215), Expect = 5e-17
Identities = 54/158 (34%), Positives = 67/158 (42%), Gaps = 28/158 (17%)
Query: 469 HGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSP 528
HGNG G C C PG +GP C S +C CSG G G+C+C
Sbjct: 523 HGNGECVSGTCHCFPGFLGPDC-------SRAACPVL-----CSGNGQYSKGRCLC---- 566
Query: 529 YGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDG 588
+ G C C+ + CGG G C G C C SG+ GE C C+
Sbjct: 567 FSGWKGTECDVPTTQCIDPQ---CGGRGICIMGSCACNSGYKGESC----EEADCIDPG- 618
Query: 589 VLCSGRGDCVCGKCVCTNPGASGPTCERCPT-CGDPCN 625
CS G C+ G+C C +PG G CE T C D C+
Sbjct: 619 --CSNHGVCIHGECHC-SPGWGGSNCEILKTMCPDQCS 653
Score = 85.9 bits (211), Expect = 1e-16
Identities = 54/169 (31%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 510 SCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGW 569
+C G G+C G C C + GP C +C +LC GNG G C+C SGW
Sbjct: 521 NCHGNGECVSGTCHC----FPGFLGP--DCSRAAC----PVLCSGNGQYSKGRCLCFSGW 570
Query: 570 TGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERCPTCGDPCNSKRS 629
G C+ T+ C+ C GRG C+ G C C N G G +CE C++
Sbjct: 571 KGTECDVPTT--QCIDPQ---CGGRGICIMGSCAC-NSGYKGESCEEADCIDPGCSNHGV 624
Query: 630 CI--ECHLSAAGQA------REECVDKCKLAGATISEEEDFSKDGSVSC 670
CI ECH S + C D+C G + E GS +C
Sbjct: 625 CIHGECHCSPGWGGSNCEILKTMCPDQCSGHGTYLQE------SGSCTC 667
Score = 68.2 bits (165), Expect = 3e-11
Identities = 78/301 (25%), Positives = 99/301 (32%), Gaps = 103/301 (34%)
Query: 451 ECNCDCQKEVEVNSSKCH-------------------HGNGSFQCGVCACHPGHMGPRCE 491
EC +C E S CH GNG + G C C G G C+
Sbjct: 517 ECPRNCHGNGECVSGTCHCFPGFLGPDCSRAACPVLCSGNGQYSKGRCLCFSGWKGTECD 576
Query: 492 ----------CG------------EDMLSTDSCKEAPD-HPSCSGRGDCYCGQCICHLSP 528
CG +SC+EA P CS G C G+C C
Sbjct: 577 VPTTQCIDPQCGGRGICIMGSCACNSGYKGESCEEADCIDPGCSNHGVCIHGECHCSPGW 636
Query: 529 YGNI--------------YGPYCQ---------------CDNFSCVRHKGLLCGGNGDCD 559
G+ +G Y Q C N C + CG +G C
Sbjct: 637 GGSNCEILKTMCPDQCSGHGTYLQESGSCTCDPNWTGPDCSNEIC----SVDCGSHGVCM 692
Query: 560 CGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTC--ERC 617
G C C GWTG CN +C C+ G C GKC C+ G +G C E C
Sbjct: 693 GGTCRCEEGWTGPACN----QRACHPR----CAEHGTCKDGKCECSQ-GWNGEHCTIEGC 743
Query: 618 PTCGDPCNSKRSCIECHLSAAGQAREECVDK-------CKLAGATI-SEEEDFSKDGSVS 669
P CNS C Q CV + C +A T+ ++ +D DG +
Sbjct: 744 PGL---CNSNGRC------TLDQNGWHCVCQPGWRGAGCDVAMETLCTDSKDNEGDGLID 794
Query: 670 C 670
C
Sbjct: 795 C 795
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 85.5 bits (210), Expect = 2e-16
Identities = 54/158 (34%), Positives = 65/158 (41%), Gaps = 28/158 (17%)
Query: 469 HGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSP 528
HGNG GVC C PG +G C +A CSG G G C C
Sbjct: 581 HGNGECVSGVCHCFPGFLGA------------DCAKAACPVLCSGNGQYSKGTCQC---- 624
Query: 529 YGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDG 588
Y G C C+ CGG+G C G CVC +G+ GE+C D
Sbjct: 625 YSGWKGAECDVPMNQCIDPS---CGGHGSCIDGNCVCSAGYKGEHCEEVDCLDP------ 675
Query: 589 VLCSGRGDCVCGKCVCTNPGASGPTCERCPT-CGDPCN 625
CS G CV G+C+C +PG G CE C D C+
Sbjct: 676 -TCSSHGVCVNGECLC-SPGWGGLNCELARVQCPDQCS 711
Score = 76.6 bits (187), Expect = 8e-14
Identities = 51/167 (30%), Positives = 67/167 (40%), Gaps = 26/167 (15%)
Query: 500 DSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCD 559
DS ++ P + C G G+C G C C G C +C +LC GNG
Sbjct: 571 DSVQDCPRN--CHGNGECVSGVCHCFPGFLG------ADCAKAAC----PVLCSGNGQYS 618
Query: 560 CGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERCPT 619
G C C SGW G C + C+ C G G C+ G CVC + G G CE
Sbjct: 619 KGTCQCYSGWKG--AECDVPMNQCIDPS---CGGHGSCIDGNCVC-SAGYKGEHCEEVDC 672
Query: 620 CGDPCNSKRSCI--ECHLSA------AGQAREECVDKCKLAGATISE 658
C+S C+ EC S AR +C D+C G + +
Sbjct: 673 LDPTCSSHGVCVNGECLCSPGWGGLNCELARVQCPDQCSGHGTYLPD 719
Score = 71.6 bits (174), Expect = 3e-12
Identities = 56/177 (31%), Positives = 70/177 (39%), Gaps = 39/177 (22%)
Query: 445 ELLVSPE---CNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDS 501
E L SP NC+ + V+ HG G+C+C P MGP +C ++ S D
Sbjct: 687 ECLCSPGWGGLNCELAR-VQCPDQCSGHGTYLPDTGLCSCDPNWMGP--DCSVEVCSVD- 742
Query: 502 CKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCG 561
C G C G C C G CD C C +G C G
Sbjct: 743 ---------CGTHGVCIGGACRCEEGWTG------AACDQRVCHPR----CIEHGTCKDG 783
Query: 562 ECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCG----KCVCTNPGASGPTC 614
+C CR GW GE+C + D C LC+G G C G +CVC G GP C
Sbjct: 784 KCECREGWNGEHC----TIDGCPD----LCNGNGRCTLGQNSWQCVC-QTGWRGPGC 831
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 85.1 bits (209), Expect = 2e-16
Identities = 63/219 (28%), Positives = 85/219 (38%), Gaps = 62/219 (28%)
Query: 470 GNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPY 529
G G + G C C PG+ G C T +C C GRG C G+C+C+
Sbjct: 472 GRGRCESGRCMCWPGYTGRDC-------GTRACPG-----DCRGRGRCVDGRCVCNPGFT 519
Query: 530 GNIYGPY-----CQ----CDNFSCVRHKGLL------------CGGNGDCDCGECVCRSG 568
G G C+ C++ CV G C G G C G CVC G
Sbjct: 520 GEDCGSRRCPGDCRGHGLCEDGVCVCDAGYSGEDCSTRSCPGGCRGRGQCLDGRCVCEDG 579
Query: 569 WTGEYCNCTTSTDSC----VSEDGVL-------------------CSGRGDCVCGKCVCT 605
++GE C + C V +DGV C GRG C G+C+C
Sbjct: 580 YSGEDCGVRQCPNDCSQHGVCQDGVCICWEGYVSEDCSIRTCPSNCHGRGRCEEGRCLC- 638
Query: 606 NPGASGPTCERCPTCGDPCNSKRSCIE----CHLSAAGQ 640
+PG +GPTC C C + C++ CH+ G+
Sbjct: 639 DPGYTGPTC-ATRMCPADCRGRGRCVQGVCLCHVGYGGE 676
Score = 82.8 bits (203), Expect = 1e-15
Identities = 60/176 (34%), Positives = 70/176 (39%), Gaps = 46/176 (26%)
Query: 450 PECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHP 509
P C DCQ G G GVC C G GP C S SC
Sbjct: 216 PSCPGDCQ------------GRGRCVQGVCVCRAGFSGPDC-------SQRSCPRG---- 252
Query: 510 SCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGW 569
CS RG C G+C+C G+ C SC R C G C+ G CVC G+
Sbjct: 253 -CSQRGRCEGGRCVCDPGYTGD------DCGMRSCPRG----CSQRGRCENGRCVCNPGY 301
Query: 570 TGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTC--ERCP-TCGD 622
TGE C + CS RG C G+CVC +PG +G C CP CG+
Sbjct: 302 TGEDCGVRSCPRG--------CSQRGRCKDGRCVC-DPGYTGEDCGTRSCPWDCGE 348
Score = 82.4 bits (202), Expect = 1e-15
Identities = 64/199 (32%), Positives = 79/199 (39%), Gaps = 46/199 (23%)
Query: 470 GNGSFQCGVCACHPGHMGP--------------------RCECGEDMLSTDSCKEAPDHP 509
G G + G C C G+ G RC C TD C
Sbjct: 379 GRGRCEDGECICDTGYSGDDCGVRSCPGDCNQRGRCEDGRCVCWPGYTGTD-CGSRACPR 437
Query: 510 SCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGW 569
C GRG C G C+C+ G C SC C G G C+ G C+C G+
Sbjct: 438 DCRGRGRCENGVCVCNAGYSGE------DCGVRSCPGD----CRGRGRCESGRCMCWPGY 487
Query: 570 TGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTC--ERCPTCGDPCNSK 627
TG C T +C + C GRG CV G+CVC NPG +G C RCP GD C
Sbjct: 488 TGRDC----GTRACPGD----CRGRGRCVDGRCVC-NPGFTGEDCGSRRCP--GD-CRGH 535
Query: 628 RSCIE-CHLSAAGQAREEC 645
C + + AG + E+C
Sbjct: 536 GLCEDGVCVCDAGYSGEDC 554
Score = 81.3 bits (199), Expect = 3e-15
Identities = 58/189 (30%), Positives = 73/189 (38%), Gaps = 40/189 (21%)
Query: 450 PECNCDCQKEVEVNSSKCHHGNGSFQC--------GVCACHPGHMGPRCECGEDMLSTDS 501
P C+ E+ +S G+ C G C C PG+ GP C S
Sbjct: 165 PTCSDPTDAEIPPSSPPSASGSCPDDCNDQGRCVRGRCVCFPGYTGPSC-------GWPS 217
Query: 502 CKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCG 561
C C GRG C G C+C GP C SC R C G C+ G
Sbjct: 218 CP-----GDCQGRGRCVQGVCVCR----AGFSGP--DCSQRSCPRG----CSQRGRCEGG 262
Query: 562 ECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERCPTCG 621
CVC G+TG+ C + CS RG C G+CVC NPG +G C +C
Sbjct: 263 RCVCDPGYTGDDCGMRSCPRG--------CSQRGRCENGRCVC-NPGYTGEDC-GVRSCP 312
Query: 622 DPCNSKRSC 630
C+ + C
Sbjct: 313 RGCSQRGRC 321
Score = 73.2 bits (178), Expect = 9e-13
Identities = 53/175 (30%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 472 GSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGN 531
G + G C C PG+ G C T SC C G C G+C+C G
Sbjct: 319 GRCKDGRCVCDPGYTGEDC-------GTRSCPW-----DCGEGGRCVDGRCVCWPGYTGE 366
Query: 532 IYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLC 591
C +C R C G G C+ GEC+C +G++G+ C SC + C
Sbjct: 367 ------DCSTRTCPRD----CRGRGRCEDGECICDTGYSGDDC----GVRSCPGD----C 408
Query: 592 SGRGDCVCGKCVCTNPGASGPTCERCPTCGDPCNSKRSCIE-CHLSAAGQAREEC 645
+ RG C G+CVC PG +G C C C + C + AG + E+C
Sbjct: 409 NQRGRCEDGRCVCW-PGYTGTDC-GSRACPRDCRGRGRCENGVCVCNAGYSGEDC 461
Score = 72.8 bits (177), Expect = 1e-12
Identities = 55/168 (32%), Positives = 69/168 (41%), Gaps = 29/168 (17%)
Query: 469 HGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCK-----EAPDHPSCSGRGDCYCGQCI 523
HG C+C PG GP C D S PD C+ +G C G+C+
Sbjct: 146 HGVFDLSRCTCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPD--DCNDQGRCVRGRCV 203
Query: 524 CHLSPYGNIYG-PYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDS 582
C G G P C D C G G C G CVCR+G++G C S S
Sbjct: 204 CFPGYTGPSCGWPSCPGD-----------CQGRGRCVQGVCVCRAGFSGPDC----SQRS 248
Query: 583 CVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERCPTCGDPCNSKRSC 630
C CS RG C G+CVC +PG +G C +C C+ + C
Sbjct: 249 CPRG----CSQRGRCEGGRCVC-DPGYTGDDC-GMRSCPRGCSQRGRC 290
Score = 66.6 bits (161), Expect = 8e-11
Identities = 56/201 (27%), Positives = 72/201 (35%), Gaps = 51/201 (25%)
Query: 455 DCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGR 514
DC + S CH G G + G C C PG+ GP C +T C C GR
Sbjct: 615 DCS--IRTCPSNCH-GRGRCEEGRCLCDPGYTGPTC-------ATRMCPA-----DCRGR 659
Query: 515 GDCYCGQCICHLSPYGNIYG--------------PYCQCDNFSCVRHKGLL--------- 551
G C G C+CH+ G G P C CV +G
Sbjct: 660 GRCVQGVCLCHVGYGGEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPDCAIQTC 719
Query: 552 ---CGGNGDCDCGECVCRSGWTGEYCNCTTST----------DSCVSEDGVLCSGRGDCV 598
C G G+C G CVC+ G+ GE C T ++ V + G D
Sbjct: 720 PGDCRGRGECHDGSCVCKDGYAGEDCGEEVPTIEGMRMHLLEETTVRTEWTPAPGPVDAY 779
Query: 599 CGKCVCTNPGASGPTCERCPT 619
+ + T GAS P R P+
Sbjct: 780 EIQFIPTTEGASPPFTARVPS 800
>gi|153946395 tenascin C precursor [Homo sapiens]
Length = 2201
Score = 82.4 bits (202), Expect = 1e-15
Identities = 58/195 (29%), Positives = 77/195 (39%), Gaps = 45/195 (23%)
Query: 452 CNCDCQKEVEVNSSKC--HHGNGSFQCGVCAC-HPGHMGPRCECG----EDMLSTDSCKE 504
C DC KC G + C +C + H RC G +D + + C++
Sbjct: 439 CPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRD 498
Query: 505 APDHPSCSGRGDCYCGQCICHLSPYGNIYGPYC-------------QCDNFSCVRHKGLL 551
CS RG C GQC+C GP C +C N CV H+G +
Sbjct: 499 RQCPRDCSNRGLCVDGQCVCE----DGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFM 554
Query: 552 ------------CGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVC 599
C G G C G+C+C G+TG C SC S+ C+ G CV
Sbjct: 555 GKDCKEQRCPSDCHGQGRCVDGQCICHEGFTGLDC----GQHSCPSD----CNNLGQCVS 606
Query: 600 GKCVCTNPGASGPTC 614
G+C+C N G SG C
Sbjct: 607 GRCIC-NEGYSGEDC 620
Score = 77.4 bits (189), Expect = 5e-14
Identities = 60/189 (31%), Positives = 73/189 (38%), Gaps = 28/189 (14%)
Query: 467 CHHGNGSFQCGVCAC-HPGHMGPRCE-----CGEDMLSTDSCKEAPDHPSCSGRGDCYCG 520
C G CG C H H RCE C E D C E C RG C G
Sbjct: 332 CEEGFTGEDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVD-CSEKRCPADCHNRGRCVDG 390
Query: 521 QCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTST 580
+C C G C C C G+G C G+CVC G+TGE C S
Sbjct: 391 RCECDDGFTG------ADCGELKCPNG----CSGHGRCVNGQCVCDEGYTGEDC----SQ 436
Query: 581 DSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERCPTCGDPCNSKRSCIE-CHLSAAG 639
C ++ C RG CV GKCVC G G C +C + C+ C+ + G
Sbjct: 437 LRCPND----CHSRGRCVEGKCVC-EQGFKGYDCSDM-SCPNDCHQHGRCVNGMCVCDDG 490
Query: 640 QAREECVDK 648
E+C D+
Sbjct: 491 YTGEDCRDR 499
Score = 75.1 bits (183), Expect = 2e-13
Identities = 63/216 (29%), Positives = 83/216 (38%), Gaps = 47/216 (21%)
Query: 470 GNGSFQ---CGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHL 526
G G+F CG C C PG GP C S E P +C RG C GQCIC
Sbjct: 163 GRGNFSTEGCG-CVCEPGWKGPNC----------SEPECPG--NCHLRGRCIDGQCICDD 209
Query: 527 SPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSE 586
G C +C C G C G C+C G+ G C+ C E
Sbjct: 210 GFTGE------DCSQLACPSD----CNDQGKCVNGVCICFEGYAGADCSREICPVPCSEE 259
Query: 587 DGVLCSGRGDCVCGKCVCTNPGASGPTCERCPTCGDPCNSKRSCIE----CHLSAAGQ-- 640
G CV G CVC + G +G C + P C + C ++ C+E C G+
Sbjct: 260 -------HGTCVDGLCVC-HDGFAGDDCNK-PLCLNNCYNRGRCVENECVCDEGFTGEDC 310
Query: 641 ----AREECVDKCKLAGATISEEEDFSKD--GSVSC 670
+C D+ + T EE F+ + G +C
Sbjct: 311 SELICPNDCFDRGRCINGTCYCEEGFTGEDCGKPTC 346
Score = 69.3 bits (168), Expect = 1e-11
Identities = 60/234 (25%), Positives = 89/234 (38%), Gaps = 46/234 (19%)
Query: 455 DCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGR 514
DC +E+ C +G+ G+C CH G G D C + +C R
Sbjct: 246 DCSREI--CPVPCSEEHGTCVDGLCVCHDGFAG------------DDCNKPLCLNNCYNR 291
Query: 515 GDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRSGWTGEYC 574
G C +C+C G C C C G C G C C G+TGE C
Sbjct: 292 GRCVENECVCDEGFTGE------DCSELICPND----CFDRGRCINGTCYCEEGFTGEDC 341
Query: 575 NCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTC--ERCPTCGDPCNSKRSCI- 631
T +C ++ G C G+CVC + G +G C +RCP C+++ C+
Sbjct: 342 GKPTCPHACHTQ--------GRCEEGQCVC-DEGFAGVDCSEKRCPA---DCHNRGRCVD 389
Query: 632 ---ECH--LSAAGQAREECVDKCKLAGATISEE--EDFSKDGSVSCSLQGENEC 678
EC + A +C + C G ++ + D G L+ N+C
Sbjct: 390 GRCECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEGYTGEDCSQLRCPNDC 443
Score = 67.4 bits (163), Expect = 5e-11
Identities = 44/137 (32%), Positives = 52/137 (37%), Gaps = 32/137 (23%)
Query: 446 LLVSPECNC-------DCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLS 498
L V +C C DC E++ HG G G C CH G MG
Sbjct: 510 LCVDGQCVCEDGFTGPDC---AELSCPNDCHGQGRCVNGQCVCHEGFMGK---------- 556
Query: 499 TDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDC 558
CKE C G+G C GQCICH G C SC C G C
Sbjct: 557 --DCKEQRCPSDCHGQGRCVDGQCICHEGFTG------LDCGQHSCPSD----CNNLGQC 604
Query: 559 DCGECVCRSGWTGEYCN 575
G C+C G++GE C+
Sbjct: 605 VSGRCICNEGYSGEDCS 621
Score = 65.5 bits (158), Expect = 2e-10
Identities = 52/178 (29%), Positives = 74/178 (41%), Gaps = 25/178 (14%)
Query: 489 RCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHK 548
+C G + P CSGRG+ C C P GP C C +
Sbjct: 139 QCTAGAGCCLQPATGRLDTRPFCSGRGNFSTEGCGCVCEPGWK--GP--NCSEPECPGN- 193
Query: 549 GLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPG 608
C G C G+C+C G+TGE C S +C S+ C+ +G CV G C+C G
Sbjct: 194 ---CHLRGRCIDGQCICDDGFTGEDC----SQLACPSD----CNDQGKCVNGVCICFE-G 241
Query: 609 ASGPTCERCPTCGDPCNSKR-SCIE----CHLSAAGQ--AREECVDKCKLAGATISEE 659
+G C R C PC+ + +C++ CH AG + C++ C G + E
Sbjct: 242 YAGADCSR-EICPVPCSEEHGTCVDGLCVCHDGFAGDDCNKPLCLNNCYNRGRCVENE 298
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 81.3 bits (199), Expect = 3e-15
Identities = 68/202 (33%), Positives = 84/202 (41%), Gaps = 39/202 (19%)
Query: 450 PECNCDCQKEVEVNSSKCHHGNGSFQ-CGVCACHPGHMGPRC--EC-----GEDMLSTDS 501
P C+ +C +CH+G + G C C PG+ G RC EC G+D T
Sbjct: 270 PNCSQEC---------RCHNGGLCDRFTGQCRCAPGYTGDRCREECPVGRFGQDCAETCD 320
Query: 502 CKEAPDHPSCSGRGDCYC------GQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGN 555
C APD G C C +C L P G YG CQ +C R L C
Sbjct: 321 C--APDARCFPANGACLCEHGFTGDRCTDRLCPDG-FYGLSCQAP-CTCDREHSLSCHPM 376
Query: 556 GDCDCGECVCRSGWTGEYCN--CTTSTDSCVSEDGVLCSGRGDC--VCGKCVCTNPGASG 611
GEC C GW G +CN C T ++ LC G C G C C PG +G
Sbjct: 377 N----GECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCQATSGLCQCA-PGYTG 431
Query: 612 PTC-ERCP--TCGDPCNSKRSC 630
P C CP T G C+++ SC
Sbjct: 432 PHCASLCPPDTYGVNCSARCSC 453
Score = 57.4 bits (137), Expect = 5e-08
Identities = 64/247 (25%), Positives = 80/247 (32%), Gaps = 70/247 (28%)
Query: 452 CNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCEC-------GEDMLSTDSCKE 504
CN CQ H S Q G C C PG G C+ GE S C
Sbjct: 490 CNASCQC--------AHEAVCSPQTGACTCTPGWHGAHCQLPCPKGQFGEGCASRCDCDH 541
Query: 505 APDHPSCSGRGDCYCG--QCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDC--DC 560
+ GR C G CHLS ++G C + +C C G C +
Sbjct: 542 SDGCDPVHGRCQCQAGWMGARCHLSCPEGLWGVNC---SNTCT------CKNGGTCLPEN 592
Query: 561 GECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCERC--- 617
G CVC G+ G C SC GR C C C N P+ C
Sbjct: 593 GNCVCAPGFRGPSCQ-----RSCQ-------PGRYGKRCVPCKCANHSFCHPSNGTCYCL 640
Query: 618 -----PTCGDPC-------NSKRSCIECH------------LSAAGQAREECVDKCKLA- 652
P C PC N ++C +CH + G C++ C L
Sbjct: 641 AGWTGPDCSQPCPPGHWGENCAQTC-QCHHGGTCHPQDGSCICPLGWTGHHCLEGCPLGT 699
Query: 653 -GATISE 658
GA S+
Sbjct: 700 FGANCSQ 706
Score = 55.8 bits (133), Expect = 1e-07
Identities = 48/172 (27%), Positives = 59/172 (34%), Gaps = 35/172 (20%)
Query: 463 NSSKCHHGNGSF-QCGVCACHPGHMGPRCE-------CGEDMLSTDSCKEAPDHPSCSGR 514
N+ C +G + G C C PG GP C+ G+ + + HPS
Sbjct: 578 NTCTCKNGGTCLPENGNCVCAPGFRGPSCQRSCQPGRYGKRCVPCKCANHSFCHPS---N 634
Query: 515 GDCYC------GQCI--CHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCR 566
G CYC C C +G CQC + GG G C+C
Sbjct: 635 GTCYCLAGWTGPDCSQPCPPGHWGENCAQTCQCHH-----------GGTCHPQDGSCICP 683
Query: 567 SGWTGEYC--NCTTSTDSCVSEDGVLCSGRGDC--VCGKCVCTNPGASGPTC 614
GWTG +C C T C C G CVC PG SG C
Sbjct: 684 LGWTGHHCLEGCPLGTFGANCSQPCQCGPGEKCHPETGACVCP-PGHSGAPC 734
Score = 55.5 bits (132), Expect = 2e-07
Identities = 65/265 (24%), Positives = 87/265 (32%), Gaps = 58/265 (21%)
Query: 450 PECN--CDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPD 507
P+C+ C C N+S C + GVC+C G P C C
Sbjct: 142 PQCDKPCSCG-----NNSSCDP-----KSGVCSCPSGLQPPNC--------LQPCTPGYY 183
Query: 508 HPSCSGRGDCY-------CGQCICHLSPYGNIYGPYCQ--CDNFSCVRHKGLLCGGNGDC 558
P+C R C+ G C C G C F C GG
Sbjct: 184 GPACQFRCQCHGAPCDPQTGACFCPAERTGPSCDVSCSQGTSGFFCPSTHSCQNGGVFQT 243
Query: 559 DCGECVCRSGWTGEYCNC--------TTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGAS 610
G C C GW G C+ + C +G LC D G+C C PG +
Sbjct: 244 PQGSCSCPPGWMGTICSLPCPEGFHGPNCSQECRCHNGGLC----DRFTGQCRCA-PGYT 298
Query: 611 GPTC-ERCPT------CGDPCN--SKRSCIECH---LSAAGQAREECVDKC---KLAGAT 655
G C E CP C + C+ C + L G + C D+ G +
Sbjct: 299 GDRCREECPVGRFGQDCAETCDCAPDARCFPANGACLCEHGFTGDRCTDRLCPDGFYGLS 358
Query: 656 ISEEEDFSKDGSVSC-SLQGENECL 679
++ S+SC + GE CL
Sbjct: 359 CQAPCTCDREHSLSCHPMNGECSCL 383
Score = 54.3 bits (129), Expect = 4e-07
Identities = 63/248 (25%), Positives = 89/248 (35%), Gaps = 42/248 (16%)
Query: 450 PECNCDCQ--KEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPD 507
P C +C + V N +C G C C PG GP+C+ + SC P
Sbjct: 103 PLCAQECVHGRCVAPNQCQCVPGWRGDDCS-SECAPGMWGPQCDKPCSCGNNSSCD--PK 159
Query: 508 HPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCDCGECVCRS 567
CS C+ +P YGP CQ F C H G D G C C +
Sbjct: 160 SGVCSCPSGLQPPNCLQPCTP--GYYGPACQ---FRCQCH-----GAPCDPQTGACFCPA 209
Query: 568 GWTGEYCNCT----------TSTDSCVSEDGVLCSGRGDCVCGK----CVCTNP---GAS 610
TG C+ + ST SC GV + +G C C +C+ P G
Sbjct: 210 ERTGPSCDVSCSQGTSGFFCPSTHSC-QNGGVFQTPQGSCSCPPGWMGTICSLPCPEGFH 268
Query: 611 GPTCERCPTCGDPCNSKRSCIECHLSAAGQAREECVDKCKLAGATISEEEDFSKDGSVSC 670
GP C + C + R +C A G + C ++C + F +D + +C
Sbjct: 269 GPNCSQECRCHNGGLCDRFTGQCR-CAPGYTGDRCREECPVG--------RFGQDCAETC 319
Query: 671 SLQGENEC 678
+ C
Sbjct: 320 DCAPDARC 327
>gi|157384973 tenascin R [Homo sapiens]
Length = 1358
Score = 79.7 bits (195), Expect = 1e-14
Identities = 58/189 (30%), Positives = 71/189 (37%), Gaps = 44/189 (23%)
Query: 451 ECNCDCQKEVEVNSSKCH------HGNGSFQCGVCACHPGHMG-----PRCECG------ 493
+CN +C +E + HGN SF+ C C+ G G P C G
Sbjct: 154 QCNANCCQESAATGQLDYIPHCSGHGNFSFESCGCICNEGWFGKNCSEPYCPLGCSSRGV 213
Query: 494 --------EDMLSTDSCKEAPDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCV 545
+ S D C E CS RG C G+C+C PY C C
Sbjct: 214 CVDGQCICDSEYSGDDCSELRCPTDCSSRGLCVDGECVCE-EPYTGE-----DCRELRCP 267
Query: 546 RHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTSTDSCVSEDGVLCSGRGDCVCGKCVCT 605
C G G C G C+C G+ GE C C++ CSGRG C G CVC
Sbjct: 268 GD----CSGKGRCANGTCLCEEGYVGEDC----GQRQCLN----ACSGRGQCEEGLCVC- 314
Query: 606 NPGASGPTC 614
G GP C
Sbjct: 315 EEGYQGPDC 323
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 75.1 bits (183), Expect = 2e-13
Identities = 71/276 (25%), Positives = 100/276 (36%), Gaps = 64/276 (23%)
Query: 448 VSPECNCDCQKEVE--VNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEA 505
V+ +C C ++ ++ +C HG + G C C PG G +C +C
Sbjct: 137 VTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQC--------ASAC--- 185
Query: 506 PDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKG------LLCGGNGD-- 557
+ S + R D G C+CH +G C C++ C + G G D
Sbjct: 186 --YCSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPCEQQSGRCQCRERTFGARCDRY 243
Query: 558 CDC---------GECVCRSGWTGEYCNCTTSTD----SCVSEDGVLCSGRGDCVC--GKC 602
C C G C C G+ G+YC C G C G+ C G+C
Sbjct: 244 CQCFRGRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCG-QCKGQQPCTVAEGRC 302
Query: 603 VCTNPGASGPTCE--------------RCPTC--GDPCNS-KRSCIECHLSAAGQAREEC 645
+ PG +G C+ RCP C G CN C C+ AG + C
Sbjct: 303 LTCEPGWNGTKCDQPCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCN---AGWIGDRC 359
Query: 646 VDKCKLAGATISEEEDF--SKDGSVSCSLQGENECL 679
KC + T E+ F + GS C Q CL
Sbjct: 360 ETKC--SNGTYGEDCAFVCADCGSGHCDFQ-SGRCL 392
Score = 73.2 bits (178), Expect = 9e-13
Identities = 62/221 (28%), Positives = 77/221 (34%), Gaps = 47/221 (21%)
Query: 455 DCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCE--CGEDMLSTDSCKEAPDHPSCS 512
+C V +S C + G C C G+ G C+ C D CKE SC
Sbjct: 74 ECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPD-CKELC---SCH 129
Query: 513 GRGDC--YCGQCICHLSPYGNIYGPYCQCDNFSCVRHKG----------------LLCGG 554
G C GQC CH +G CQC + +C G C
Sbjct: 130 PHGQCEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSA 189
Query: 555 NGDCD--CGECVCRSGWTGEYCN--CTTSTDSCVSED----------GVLCSG-----RG 595
CD G C+C +GW G CN C ++ C + G C RG
Sbjct: 190 TSRCDPQTGACLCHAGWWGRSCNNQCACNSSPCEQQSGRCQCRERTFGARCDRYCQCFRG 249
Query: 596 DC--VCGKCVCTNPGASGPTC-ERCPTCGDPCNSKRSCIEC 633
C V G C C PG G C E CP +R C +C
Sbjct: 250 RCHPVDGTCAC-EPGYRGKYCREPCPAGFYGLGCRRRCGQC 289
Score = 35.0 bits (79), Expect = 0.27
Identities = 41/153 (26%), Positives = 53/153 (34%), Gaps = 20/153 (13%)
Query: 466 KCHHGNGSFQCGVC-----ACHPGHMGPRCECGEDMLSTDSCKEAPDH--PSCSGRGDCY 518
+C G C V C PG G +C+ +T E H P C C
Sbjct: 285 RCGQCKGQQPCTVAEGRCLTCEPGWNGTKCD---QPCATGFYGEGCSHRCPPCRDGHACN 341
Query: 519 CGQCICHLSPYGNIYGPYCQ--CDNFSCVRHKGLLCG--GNGDCD--CGECVCRSGWTGE 572
C G I G C+ C N + +C G+G CD G C+C G G
Sbjct: 342 HVTGKCTRCNAGWI-GDRCETKCSNGTYGEDCAFVCADCGSGHCDFQSGRCLCSPGVHGP 400
Query: 573 YCNCTTSTDSCVSEDGVLCSGRGDC---VCGKC 602
+CN T ++ CS D V G C
Sbjct: 401 HCNVTCPPGLHGADCAQACSCHEDTCDPVTGAC 433
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 75.1 bits (183), Expect = 2e-13
Identities = 71/276 (25%), Positives = 100/276 (36%), Gaps = 64/276 (23%)
Query: 448 VSPECNCDCQKEVE--VNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEA 505
V+ +C C ++ ++ +C HG + G C C PG G +C +C
Sbjct: 137 VTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQC--------ASAC--- 185
Query: 506 PDHPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKG------LLCGGNGD-- 557
+ S + R D G C+CH +G C C++ C + G G D
Sbjct: 186 --YCSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPCEQQSGRCQCRERTFGARCDRY 243
Query: 558 CDC---------GECVCRSGWTGEYCNCTTSTD----SCVSEDGVLCSGRGDCVC--GKC 602
C C G C C G+ G+YC C G C G+ C G+C
Sbjct: 244 CQCFRGRCHPVDGTCACEPGYRGKYCREPCPAGFYGLGCRRRCG-QCKGQQPCTVAEGRC 302
Query: 603 VCTNPGASGPTCE--------------RCPTC--GDPCNS-KRSCIECHLSAAGQAREEC 645
+ PG +G C+ RCP C G CN C C+ AG + C
Sbjct: 303 LTCEPGWNGTKCDQPCATGFYGEGCSHRCPPCRDGHACNHVTGKCTRCN---AGWIGDRC 359
Query: 646 VDKCKLAGATISEEEDF--SKDGSVSCSLQGENECL 679
KC + T E+ F + GS C Q CL
Sbjct: 360 ETKC--SNGTYGEDCAFVCADCGSGHCDFQ-SGRCL 392
Score = 73.2 bits (178), Expect = 9e-13
Identities = 62/221 (28%), Positives = 77/221 (34%), Gaps = 47/221 (21%)
Query: 455 DCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCE--CGEDMLSTDSCKEAPDHPSCS 512
+C V +S C + G C C G+ G C+ C D CKE SC
Sbjct: 74 ECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCPRQFWGPD-CKELC---SCH 129
Query: 513 GRGDC--YCGQCICHLSPYGNIYGPYCQCDNFSCVRHKG----------------LLCGG 554
G C GQC CH +G CQC + +C G C
Sbjct: 130 PHGQCEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEPGWWGAQCASACYCSA 189
Query: 555 NGDCD--CGECVCRSGWTGEYCN--CTTSTDSCVSED----------GVLCSG-----RG 595
CD G C+C +GW G CN C ++ C + G C RG
Sbjct: 190 TSRCDPQTGACLCHAGWWGRSCNNQCACNSSPCEQQSGRCQCRERTFGARCDRYCQCFRG 249
Query: 596 DC--VCGKCVCTNPGASGPTC-ERCPTCGDPCNSKRSCIEC 633
C V G C C PG G C E CP +R C +C
Sbjct: 250 RCHPVDGTCAC-EPGYRGKYCREPCPAGFYGLGCRRRCGQC 289
Score = 35.0 bits (79), Expect = 0.27
Identities = 41/153 (26%), Positives = 53/153 (34%), Gaps = 20/153 (13%)
Query: 466 KCHHGNGSFQCGVC-----ACHPGHMGPRCECGEDMLSTDSCKEAPDH--PSCSGRGDCY 518
+C G C V C PG G +C+ +T E H P C C
Sbjct: 285 RCGQCKGQQPCTVAEGRCLTCEPGWNGTKCD---QPCATGFYGEGCSHRCPPCRDGHACN 341
Query: 519 CGQCICHLSPYGNIYGPYCQ--CDNFSCVRHKGLLCG--GNGDCD--CGECVCRSGWTGE 572
C G I G C+ C N + +C G+G CD G C+C G G
Sbjct: 342 HVTGKCTRCNAGWI-GDRCETKCSNGTYGEDCAFVCADCGSGHCDFQSGRCLCSPGVHGP 400
Query: 573 YCNCTTSTDSCVSEDGVLCSGRGDC---VCGKC 602
+CN T ++ CS D V G C
Sbjct: 401 HCNVTCPPGLHGADCAQACSCHEDTCDPVTGAC 433
>gi|14192943 multiple EGF-like-domains 10 [Homo sapiens]
Length = 1140
Score = 73.2 bits (178), Expect = 9e-13
Identities = 70/242 (28%), Positives = 86/242 (35%), Gaps = 76/242 (31%)
Query: 450 PECN--CDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRC--ECGEDMLSTDSCKEA 505
P+C C CQ N CHH G C+C G MG C C E + +E
Sbjct: 232 PQCEQRCPCQ-----NGGVCHHVTGE-----CSCPSGWMGTVCGQPCPEGRFGKNCSQEC 281
Query: 506 PDHP--SC-SGRGDCYCG--------QCICHLSPYGNIYGPYCQCDNFSCVRHKGLLC-- 552
H +C + G C+C Q C + YG + CQC N H C
Sbjct: 282 QCHNGGTCDAATGQCHCSPGYTGERCQDECPVGTYGVLCAETCQCVNGGKCYHVSGACLC 341
Query: 553 --GGNGD-------------------CDC------------GECVCRSGWTGEYCNCTTS 579
G G+ C C GEC C+ GW+G YCN T S
Sbjct: 342 EAGFAGERCEARLCPEGLYGIKCDKRCPCHLENTHSCHPMSGECACKPGWSGLYCNETCS 401
Query: 580 --------TDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTCER-CP--TCGDPCNSKR 628
C ++G C D V GKC C PG G C CP T G C+S+
Sbjct: 402 PGFYGEACQQICSCQNGADC----DSVTGKCTCA-PGFKGIDCSTPCPLGTYGINCSSRC 456
Query: 629 SC 630
C
Sbjct: 457 GC 458
Score = 59.7 bits (143), Expect = 1e-08
Identities = 70/259 (27%), Positives = 87/259 (33%), Gaps = 78/259 (30%)
Query: 450 PECNCDCQ--KEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPD 507
P C C + + N+ +C G G C AC H GP C S CK
Sbjct: 107 PHCADKCVHGRCIAPNTCQCEPGWGGTNCS-SACDGDHWGPHCT------SRCQCKNGAL 159
Query: 508 HPSCSGRGDCYCG------QCICHLSPYGNIYGPYCQCDNFSCVRH-----------KGL 550
+G C G + C YGN CQC N + H G
Sbjct: 160 CNPITGACHCAAGFRGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTGA 219
Query: 551 LC------GGNGD-----CDC----------GECVCRSGWTGEYC-----------NCTT 578
C G +G C C GEC C SGW G C NC
Sbjct: 220 FCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPSGWMGTVCGQPCPEGRFGKNC-- 277
Query: 579 STDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTC-ERCP--TCGDPCNSKRSCI---E 632
+ C +G C D G+C C +PG +G C + CP T G C C+ +
Sbjct: 278 -SQECQCHNGGTC----DAATGQCHC-SPGYTGERCQDECPVGTYGVLCAETCQCVNGGK 331
Query: 633 CH------LSAAGQAREEC 645
C+ L AG A E C
Sbjct: 332 CYHVSGACLCEAGFAGERC 350
Score = 57.4 bits (137), Expect = 5e-08
Identities = 70/255 (27%), Positives = 83/255 (32%), Gaps = 81/255 (31%)
Query: 441 GDALELLVSPE------CNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCE--- 491
G+ E + PE C+ C +E N+ CH +G CAC PG G C
Sbjct: 347 GERCEARLCPEGLYGIKCDKRCPCHLE-NTHSCHPMSGE-----CACKPGWSGLYCNETC 400
Query: 492 ----CGEDMLSTDSCKEAPDHPSCSGRGDCYCG------QCICHLSPYGNIYGPYCQCDN 541
GE SC+ D S +G+ C G C L YG C C N
Sbjct: 401 SPGFYGEACQQICSCQNGADCDSVTGKCTCAPGFKGIDCSTPCPLGTYGINCSSRCGCKN 460
Query: 542 F--------SCVRHKG-------LLC-------GGNGDCDC----------GECVCRSGW 569
SC G + C G N C C G C C GW
Sbjct: 461 DAVCSPVDGSCTCKAGWHGVDCSIRCPSGTWGFGCNLTCQCLNGGACNTLDGTCTCAPGW 520
Query: 570 TGEYCN--CTTSTDSCVSEDGVLCSGRGDC--------VCGKCVCTNPGASGPTCERC-- 617
GE C C T G+ C+ R DC G C C PG SG C+
Sbjct: 521 RGEKCELPCQDGT------YGLNCAERCDCSHADGCHPTTGHCRCL-PGWSGVHCDSVCA 573
Query: 618 -----PTCGDPCNSK 627
P C PC K
Sbjct: 574 EGRWGPNCSLPCYCK 588
Score = 57.4 bits (137), Expect = 5e-08
Identities = 60/203 (29%), Positives = 75/203 (36%), Gaps = 44/203 (21%)
Query: 452 CNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCECGEDMLSTDSCKEAPDHPSC 511
C+ C + V +S CHH G +C C PG G C E S K +C
Sbjct: 624 CSQTCPQCVH-SSGPCHHITG-----LCDCLPGFTGALCN--EVCPSGRFGKNCAGICTC 675
Query: 512 SGRGDC--YCGQCICHLSPYGNI---------YGPYCQCDNFSCVRHKGLLCGGNGDCDC 560
+ G C C C+ G+ +GP C +C H G C
Sbjct: 676 TNNGTCNPIDRSCQCYPGWIGSDCSQPCPPAHWGPNCI---HTCNCHNGAFCSAYD---- 728
Query: 561 GECVCRSGWTGEYCNCTTSTDSC----VSEDGVL---CSGRGDC--VCGKCVCTNPGASG 611
GEC C GWTG YC T C +D L C DC + G+C C G G
Sbjct: 729 GECKCTPGWTGLYC-----TQRCPLGFYGKDCALICQCQNGADCDHISGQCTC-RTGFMG 782
Query: 612 PTCE-RCP--TCGDPCNSKRSCI 631
CE +CP T G C C+
Sbjct: 783 RHCEQKCPSGTYGYGCRQICDCL 805
Score = 53.9 bits (128), Expect = 6e-07
Identities = 57/227 (25%), Positives = 73/227 (32%), Gaps = 43/227 (18%)
Query: 450 PECNCDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCE--CGEDMLSTDSCKEAPD 507
P C+ C + N + C +G +C C PG G C+ C + P
Sbjct: 579 PNCSLPCYCK---NGASCSPDDG-----ICECAPGFRGTTCQRICSPGFYGHRCSQTCPQ 630
Query: 508 HPSCSGRGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCD--CGECVC 565
SG G C C G + C F C NG C+ C C
Sbjct: 631 CVHSSGPCHHITGLCDCLPGFTGALCNEVCPSGRFGKNCAGICTCTNNGTCNPIDRSCQC 690
Query: 566 RSGWTGEYC-----------NCTTSTDSCVSEDGVLCSGRGDCVCGKCVCTNPGASGPTC 614
GW G C NC +C +G CS G+C CT PG +G C
Sbjct: 691 YPGWIGSDCSQPCPPAHWGPNC---IHTCNCHNGAFCSAYD----GECKCT-PGWTGLYC 742
Query: 615 -ERCP------TCGDPCNSKRSCIECHLSA-----AGQAREECVDKC 649
+RCP C C + H+S G C KC
Sbjct: 743 TQRCPLGFYGKDCALICQCQNGADCDHISGQCTCRTGFMGRHCEQKC 789
Score = 43.1 bits (100), Expect = 0.001
Identities = 35/124 (28%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 462 VNSSKCHHGNG-SFQCGVCACHPGHMGPRC--EC-----GEDMLSTDSCKEAPDHPSCSG 513
+++ CH+G S G C C PG G C C G+D C+ D C
Sbjct: 713 IHTCNCHNGAFCSAYDGECKCTPGWTGLYCTQRCPLGFYGKDCALICQCQNGAD---C-- 767
Query: 514 RGDCYCGQCICHLSPYGNIYGPYCQCDNFSCVRHKGLLCGGNGDCD--CGECVCRSGWTG 571
D GQC C G C + + C N CD G C C GW G
Sbjct: 768 --DHISGQCTCRTGFMGRHCEQKCPSGTYGYGCRQICDCLNNSTCDHITGTCYCSPGWKG 825
Query: 572 EYCN 575
C+
Sbjct: 826 ARCD 829
Score = 35.8 bits (81), Expect = 0.16
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 16/98 (16%)
Query: 544 CVRHKGLLCGGNGDCDCGECVCRSGWTGEYCNCTTS--------TDSCVSEDGVLCSGRG 595
CV H C C C GW G C+ T C ++G LC+
Sbjct: 105 CVPHCADKCVHGRCIAPNTCQCEPGWGGTNCSSACDGDHWGPHCTSRCQCKNGALCNP-- 162
Query: 596 DCVCGKCVCTNPGASGPTCE-RCP--TCGDPCNSKRSC 630
+ G C C G G CE RC T G+ C+ + C
Sbjct: 163 --ITGACHCA-AGFRGWRCEDRCEQGTYGNDCHQRCQC 197
Score = 30.8 bits (68), Expect = 5.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 10/38 (26%)
Query: 454 CDCQKEVEVNSSKCHHGNGSFQCGVCACHPGHMGPRCE 491
CDC +N+S C H G+ C C PG G RC+
Sbjct: 802 CDC-----LNNSTCDHITGT-----CYCSPGWKGARCD 829
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,279,163
Number of Sequences: 37866
Number of extensions: 1786335
Number of successful extensions: 7489
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 4755
Number of HSP's gapped (non-prelim): 1376
length of query: 788
length of database: 18,247,518
effective HSP length: 110
effective length of query: 678
effective length of database: 14,082,258
effective search space: 9547770924
effective search space used: 9547770924
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.