Guide to the Human Genome
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Name: IPP Sequence: fasta or formatted (584aa) NCBI GI: 5174473
Description:

intracisternal A particle-promoted polypeptide isoform 1

Referenced in:

Kelch Family

Other entries for this name:
alt prot [582aa] intracisternal A particle-promoted polypeptide isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         37           2
 C cysteine            3.4         20           2
 D aspartate           4.6         27           1
 E glutamate           7.2         42           3
 F phenylalanine       4.5         26           1
 G glycine             8.2         48           2
 H histidine           2.4         14           1
 I isoleucine          5.8         34           2
 K lysine              4.8         28           2
 L leucine             9.6         56           2
 M methionine          2.4         14           1
 N asparagine          3.4         20           2
 P proline             3.6         21           2
 Q glutamine           4.1         24           1
 R arginine            4.5         26           2
 S serine              7.0         41           3
 T threonine           3.9         23           2
 V valine              8.6         50           2
 W tryptophan          1.7         10           1
 Y tyrosine            3.9         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   intracisternal A particle-promoted polypeptide isofor... 
IPP                   0.941   intracisternal A particle-promoted polypeptide isof...
KLHL20                0.305   kelch-like 20 
KLHL12                0.266   kelch-like 12 
KLHL17                0.262   kelch-like 17 
KEAP1                 0.259   kelch-like ECH-associated protein 1 
KEAP1                 0.259   kelch-like ECH-associated protein 1 
KLHL5                 0.255   kelch-like 5 isoform 3 
KLHL5                 0.255   kelch-like 5 isoform 1 
KLHL4                 0.254   kelch-like 4 isoform 2 
KLHL4                 0.254   kelch-like 4 isoform 1 
KLHL2                 0.251   kelch-like 2, Mayven isoform 2 
KLHL2                 0.251   kelch-like 2, Mayven isoform 1 
KLHL1                 0.249   kelch-like 1 protein 
KLHL3                 0.246   kelch-like 3 
KLHL18                0.244   kelch-like 18 
KLHL5                 0.238   kelch-like 5 isoform 2 
KLHL28                0.237   BTB (POZ) domain containing 5 
KLHL8                 0.225   kelch-like 8 
KLHL2                 0.218   kelch-like 2, Mayven isoform 3 
KLHL10                0.200   kelch-like 10 
KLHL7                 0.190   kelch-like 7 isoform 1 
KLHL7                 0.184   kelch-like 7 isoform 2 
KLHL25                0.168   BTB/POZ KELCH domain protein 
KLHL9                 0.166   kelch-like 9 
KLHL24                0.161   DRE1 protein 
KLHL21                0.161   kelch-like 21 
KLHL13                0.160   kelch-like 13 
KLHL22                0.159   kelch-like 
ENC1                  0.157   ectodermal-neural cortex (with BTB-like domain) [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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