Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZBTB48 Sequence: fasta or formatted (688aa) NCBI GI: 4885419
Description:

zinc finger and BTB domain containing 48

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         47           2
 C cysteine            5.1         35           2
 D aspartate           2.8         19           2
 E glutamate           9.2         63           4
 F phenylalanine       4.4         30           2
 G glycine             7.3         50           2
 H histidine           5.2         36           1
 I isoleucine          1.6         11           2
 K lysine              6.7         46           2
 L leucine             8.7         60           3
 M methionine          1.7         12           1
 N asparagine          2.8         19           1
 P proline             6.1         42           2
 Q glutamine           5.7         39           2
 R arginine            7.0         48           3
 S serine              6.5         45           2
 T threonine           4.1         28           1
 V valine              6.7         46           3
 W tryptophan          0.3          2           1
 Y tyrosine            1.5         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 48 
ZBTB17                0.176   zinc finger and BTB domain containing 17 
ZNF782                0.169   zinc finger protein 782 
ZNF484                0.166   zinc finger protein 484 isoform b 
ZNF484                0.166   zinc finger protein 484 isoform a 
ZNF569                0.166   zinc finger protein 569 
ZNF567                0.165   zinc finger protein 567 
LOC100287429          0.164   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.164   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.164   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.164   zinc finger protein 84 
ZNF84                 0.164   zinc finger protein 84 
ZNF182                0.163   zinc finger protein 21 isoform 2 
ZNF182                0.163   zinc finger protein 21 isoform 1 
ZFP112                0.163   zinc finger protein 228 isoform 1 
ZFP112                0.163   zinc finger protein 228 isoform 2 
ZFP37                 0.162   zinc finger protein 37 homolog 
ZNF658                0.162   zinc finger protein 658 
ZNF605                0.161   zinc finger protein 605 
ZNF568                0.160   zinc finger protein 568 
ZNF33A                0.160   zinc finger protein 33A isoform b 
ZNF33A                0.160   zinc finger protein 33A isoform a 
ZNF12                 0.159   zinc finger protein 12 isoform b 
ZNF12                 0.159   zinc finger protein 12 isoform a 
ZNF585B               0.159   zinc finger protein 585B 
ZNF234                0.159   zinc finger protein 234 
ZNF234                0.159   zinc finger protein 234 
ZNF226                0.159   zinc finger protein 226 isoform a 
ZNF226                0.159   zinc finger protein 226 isoform a 
ZNF845                0.159   zinc finger protein 845 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press