Guide to the Human Genome
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Search of human proteins with 94721261

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo
sapiens]
         (421 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo s...   850   0.0  
gi|119226224 NEDD4 binding protein 2-like 1 isoform 1 [Homo sapi...    65   1e-10
gi|7656971 phosphonoformate immuno-associated protein 5 isoform ...    60   3e-09
gi|31742492 Nedd4 binding protein 2 [Homo sapiens]                     55   9e-08
gi|119226227 NEDD4 binding protein 2-like 1 isoform 2 [Homo sapi...    44   3e-04
gi|64762445 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase ...    37   0.026
gi|64762406 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase ...    37   0.026
gi|157278100 phosphonoformate immuno-associated protein 5 isofor...    34   0.28 
gi|28144897 adenylate kinase 5 isoform 1 [Homo sapiens]                33   0.37 
gi|28144899 adenylate kinase 5 isoform 2 [Homo sapiens]                33   0.37 
gi|226371754 katanin p60 subunit A-like 2 [Homo sapiens]               33   0.49 
gi|146134388 YLP motif containing 1 [Homo sapiens]                     33   0.49 
gi|4758902 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4...    33   0.63 
gi|7705915 tubulin, epsilon 1 [Homo sapiens]                           32   0.83 
gi|166851804 tudor domain containing 9 [Homo sapiens]                  31   1.8  
gi|37595541 tripartite motif-containing 69 isoform b [Homo sapiens]    31   1.8  
gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]    31   1.8  
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom...    31   2.4  
gi|21450759 adenylate kinase domain containing 1 isoform 2 [Homo...    31   2.4  
gi|52421790 mitogen-activated protein kinase kinase kinase 9 [Ho...    30   3.1  
gi|209862785 anoctamin 2 [Homo sapiens]                                30   4.1  
gi|18105056 vacuolar protein sorting 33A [Homo sapiens]                30   5.4  
gi|118582286 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase...    29   7.0  
gi|84662781 DCP1 decapping enzyme homolog A [Homo sapiens]             29   7.0  
gi|108773784 ATP-binding cassette, sub-family E, member 1 [Homo ...    29   7.0  
gi|108773782 ATP-binding cassette, sub-family E, member 1 [Homo ...    29   7.0  
gi|4759248 tryptophan hydroxylase 1 [Homo sapiens]                     29   9.2  
gi|7657575 sirtuin 1 isoform a [Homo sapiens]                          29   9.2  
gi|28466983 leprecan-like 2 [Homo sapiens]                             29   9.2  

>gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo
           sapiens]
          Length = 421

 Score =  850 bits (2195), Expect = 0.0
 Identities = 421/421 (100%), Positives = 421/421 (100%)

Query: 1   MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG 60
           MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG
Sbjct: 1   MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKTLFILRGLPG 60

Query: 61  SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV 120
           SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV
Sbjct: 61  SGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDIRILV 120

Query: 121 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG 180
           LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG
Sbjct: 121 LDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKLKPG 180

Query: 181 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT 240
           LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT
Sbjct: 181 LEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKAFKKELRQFVPGDEPREKMDLVT 240

Query: 241 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV 300
           YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV
Sbjct: 241 YFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVTPKTTGARV 300

Query: 301 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR 360
           ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR
Sbjct: 301 ELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLGCAADVEAVQTGLDLLEILRQEKGGSR 360

Query: 361 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI 420
           GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI
Sbjct: 361 GEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAIFTGYYGKGKPVPTQGSRKGGALQSCTI 420

Query: 421 I 421
           I
Sbjct: 421 I 421


>gi|119226224 NEDD4 binding protein 2-like 1 isoform 1 [Homo
           sapiens]
          Length = 243

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 3/138 (2%)

Query: 50  KTLFILRGLPGSGKSTLARVIVDKYRDGTKMVSADAYKITPGA---RGAFSEEYKRLDED 106
           K L++LRGLPGSGK+TLAR +   +       + D +    GA      F EE    ++ 
Sbjct: 42  KHLYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQK 101

Query: 107 LAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQ 166
            A    R  I  +++D+TN     ++    MA +  Y+V+  EP T W+ +  +L  +N 
Sbjct: 102 RARKAMRNGISPIIIDNTNLHAWEMKPYAVMALENNYEVIFREPDTRWKFNVQELARRNI 161

Query: 167 WQLSADDLKKLKPGLEKD 184
             +S + + ++K   E D
Sbjct: 162 HGVSREKIHRMKERYEHD 179


>gi|7656971 phosphonoformate immuno-associated protein 5 isoform 2
           [Homo sapiens]
          Length = 583

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 50  KTLFILRGLPGSGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSE--EYKRLDEDL 107
           K L +LRGLPGSGK+TL+R+++ + RDG    + D +    G R   ++  +    +++ 
Sbjct: 402 KLLILLRGLPGSGKTTLSRILLGQNRDGIVFSTDDYFHHQDGYRYNVNQLGDAHDWNQNR 461

Query: 108 AAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQW 167
           A     +    +++D+TN +   ++   E+A    Y+V   EP+T W+ D  +L+++N+ 
Sbjct: 462 AKQAIDQGRSPVIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKH 521

Query: 168 QLSADDLKKL 177
            +S   + ++
Sbjct: 522 GVSRKKIAQM 531


>gi|31742492 Nedd4 binding protein 2 [Homo sapiens]
          Length = 1770

 Score = 55.5 bits (132), Expect = 9e-08
 Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 26/181 (14%)

Query: 9   SHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVATLLECKT------LFILRGLPGSG 62
           SHT   K++  K  +S           +   E  V+ ++  KT      L +LRGLPGSG
Sbjct: 403 SHTSPTKVWRNKDGTSA----------YQVQETPVSQVVRKKTSYVGLVLVLLRGLPGSG 452

Query: 63  KSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDE------DLAAYCRRRDI 116
           KS LAR + +    G  + + D + I     G +  + K L E      + A     + I
Sbjct: 453 KSFLARTLQEDNPSGVILSTDDYFYI----NGQYQFDVKYLGEAHEWNQNRAKEAFEKKI 508

Query: 117 RILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKK 176
             +++D+TN +   ++    ++ +++Y+V+  EP T W+    +L  +N   +S + + +
Sbjct: 509 SPIIIDNTNLQAWEMKPYVALSQKHKYKVLFREPDTWWKFKPKELARRNIHGVSKEKITR 568

Query: 177 L 177
           +
Sbjct: 569 M 569


>gi|119226227 NEDD4 binding protein 2-like 1 isoform 2 [Homo
           sapiens]
          Length = 173

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 10/137 (7%)

Query: 50  KTLFILRGLPGSGKSTLARVIVDKYRDGTKMVSADAYKITPGA---RGAFSEEYKRLDED 106
           K L++LRGLPGSGK+TLAR +   +       + D +    GA      F EE    ++ 
Sbjct: 42  KHLYLLRGLPGSGKTTLARQLQHDFPRALIFSTDDFFFREDGAYEFNPDFLEEAHEWNQK 101

Query: 107 LAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQ 166
            A    R  I  +++D+TN     ++        Y   V   E K  +RL+   +  + +
Sbjct: 102 RARKAMRNGISPIIIDNTNLHAWEMK-------PYAVMVFQTEQKNLFRLEMDMVVFRPE 154

Query: 167 WQLSADDLKKLKPGLEK 183
            +  +  LK+  P  E+
Sbjct: 155 MKKHSWCLKRKNPPNER 171


>gi|64762445 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
           isoform b [Homo sapiens]
          Length = 471

 Score = 37.4 bits (85), Expect = 0.026
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 22/119 (18%)

Query: 51  TLFILRGLPGSGKSTLARVIVDKYRDG----TKMVSADAYKITPGARGAFSEEYKRLD-- 104
           TL ++ GLP  GK+ +++ +  +Y +     TK+ +   Y+     +   S ++ R D  
Sbjct: 39  TLIVMIGLPARGKTYVSKKLT-RYLNWIGVPTKVFNLGVYR-REAVKSYKSYDFFRHDNE 96

Query: 105 --------------EDLAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVE 149
                         ED+ AY    + +I V D TN  RER + +   A+Q  ++V  VE
Sbjct: 97  EAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMILNFAEQNSFKVFFVE 155


>gi|64762406 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
           isoform a [Homo sapiens]
          Length = 505

 Score = 37.4 bits (85), Expect = 0.026
 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 22/119 (18%)

Query: 51  TLFILRGLPGSGKSTLARVIVDKYRDG----TKMVSADAYKITPGARGAFSEEYKRLD-- 104
           TL ++ GLP  GK+ +++ +  +Y +     TK+ +   Y+     +   S ++ R D  
Sbjct: 39  TLIVMIGLPARGKTYVSKKLT-RYLNWIGVPTKVFNLGVYR-REAVKSYKSYDFFRHDNE 96

Query: 105 --------------EDLAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVE 149
                         ED+ AY    + +I V D TN  RER + +   A+Q  ++V  VE
Sbjct: 97  EAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMILNFAEQNSFKVFFVE 155


>gi|157278100 phosphonoformate immuno-associated protein 5 isoform 1
           [Homo sapiens]
          Length = 752

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 15/59 (25%), Positives = 35/59 (59%)

Query: 119 LVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLSADDLKKL 177
           +++D+TN +   ++   E+A    Y+V   EP+T W+ D  +L+++N+  +S   + ++
Sbjct: 44  VIIDNTNIQAWEMKPYVEVAIGKGYRVEFHEPETWWKFDPEELEKRNKHGVSRKKIAQM 102


>gi|28144897 adenylate kinase 5 isoform 1 [Homo sapiens]
          Length = 562

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 5/39 (12%)

Query: 40  EDTVATLLE----CKTLFILRGLPGSGKSTLARVIVDKY 74
           EDT+   +E    CK +FI+ G PGSGK T    +V+KY
Sbjct: 363 EDTMGGFMEDLRKCKIIFIIGG-PGSGKGTQCEKLVEKY 400


>gi|28144899 adenylate kinase 5 isoform 2 [Homo sapiens]
          Length = 536

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 5/39 (12%)

Query: 40  EDTVATLLE----CKTLFILRGLPGSGKSTLARVIVDKY 74
           EDT+   +E    CK +FI+ G PGSGK T    +V+KY
Sbjct: 337 EDTMGGFMEDLRKCKIIFIIGG-PGSGKGTQCEKLVEKY 374


>gi|226371754 katanin p60 subunit A-like 2 [Homo sapiens]
          Length = 466

 Score = 33.1 bits (74), Expect = 0.49
 Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 19/125 (15%)

Query: 54  ILRGLPGSGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRR 113
           +L G PG+GK+ LA+ +  + +  T   +  A  I    RG  SE+  R+  +LA Y   
Sbjct: 219 LLYGPPGTGKTLLAKAVATECK--TTFFNISASTIVSKWRGD-SEKLVRVLFELARYHAP 275

Query: 114 RDIRILVLDDTNHER----------------ERLEQLFEMADQYQYQVVLVEPKTAWRLD 157
             I +  L+    +R                E L Q+  +A       VL      W LD
Sbjct: 276 STIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELD 335

Query: 158 CAQLK 162
           CA L+
Sbjct: 336 CAMLR 340


>gi|146134388 YLP motif containing 1 [Homo sapiens]
          Length = 2146

 Score = 33.1 bits (74), Expect = 0.49
 Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 4/44 (9%)

Query: 50   KTLFILRGLPGSGKSTLARVIVDKYRD----GTKMVSADAYKIT 89
            + + I+RGLPGSGK+ +A++I DK  +      +++S D Y IT
Sbjct: 1834 RIVVIMRGLPGSGKTHVAKLIRDKEVEFGGPAPRVLSLDDYFIT 1877


>gi|4758902 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
           [Homo sapiens]
          Length = 469

 Score = 32.7 bits (73), Expect = 0.63
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 18/122 (14%)

Query: 46  LLECKTLFILRGLPGSGKSTLARVI---------------VDKY-RDGTKMVSADAYKIT 89
           +  C TL ++ GLP  GK+ +++ +               V +Y RD  K   +  + + 
Sbjct: 35  MTNCPTLIVMVGLPARGKTYISKKLTRYLNWIGVPTREFNVGQYRRDVVKTYKSFEFFLP 94

Query: 90  PGARGAFSEEYKRLD--EDLAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVL 147
               G    +   L    D+  +       + V D TN  RER   +F   +Q  Y+   
Sbjct: 95  DNEEGLKIRKQCALAALRDVRRFLSEEGGHVAVFDATNTTRERRATIFNFGEQNGYKTFF 154

Query: 148 VE 149
           VE
Sbjct: 155 VE 156


>gi|7705915 tubulin, epsilon 1 [Homo sapiens]
          Length = 475

 Score = 32.3 bits (72), Expect = 0.83
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 118 ILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKN-QWQLSADDLKK 176
           +  L D N    RL+Q+F  A    +Q++  +PK +  L CA +   N Q      ++++
Sbjct: 306 LYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNVQISDLRRNIER 365

Query: 177 LKPGLE 182
           LKP L+
Sbjct: 366 LKPSLQ 371


>gi|166851804 tudor domain containing 9 [Homo sapiens]
          Length = 1382

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 35  PFLQDEDTVATLLECKTLFILRGLPGSGKST-LARVIVDKY 74
           P  + ++ V +L+E  ++ I+ G  GSGKST L + I+D Y
Sbjct: 133 PISRYKEEVVSLIESNSVVIIHGATGSGKSTQLPQYILDHY 173


>gi|37595541 tripartite motif-containing 69 isoform b [Homo sapiens]
          Length = 341

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 286 ISALFVTPKTTGARVELSEQQLQLWPSDVDKLSPTD 321
           +S L + PKT    + LS+ Q  +W  D+ K+ P D
Sbjct: 163 LSPLTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDD 198


>gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]
          Length = 500

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 286 ISALFVTPKTTGARVELSEQQLQLWPSDVDKLSPTD 321
           +S L + PKT    + LS+ Q  +W  D+ K+ P D
Sbjct: 322 LSPLTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDD 357


>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
          sapiens]
          Length = 1911

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 5/54 (9%)

Query: 26 AKDKPELQFPFL----QDEDTVATLLECKTLFILRGLPGSGKSTLARVIVDKYR 75
          +++K E ++PF     +DE     LL     F++ G PG GK+TLAR I   ++
Sbjct: 3  SQEKTE-EYPFADIFDEDETERNFLLSKPVCFVVFGKPGVGKTTLARYITQAWK 55


>gi|21450759 adenylate kinase domain containing 1 isoform 2 [Homo
          sapiens]
          Length = 421

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 5/54 (9%)

Query: 26 AKDKPELQFPFL----QDEDTVATLLECKTLFILRGLPGSGKSTLARVIVDKYR 75
          +++K E ++PF     +DE     LL     F++ G PG GK+TLAR I   ++
Sbjct: 3  SQEKTE-EYPFADIFDEDETERNFLLSKPVCFVVFGKPGVGKTTLARYITQAWK 55


>gi|52421790 mitogen-activated protein kinase kinase kinase 9 [Homo
           sapiens]
          Length = 1118

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)

Query: 316 KLSPTDNLPRGSRAH-----ITLGCAADVEAVQTGLDLLE 350
           +L+PT++L RG   H       LGC A + A   G DLLE
Sbjct: 746 QLTPTNSLKRGGAHHRRCEVALLGCGAVLAATGLGFDLLE 785


>gi|209862785 anoctamin 2 [Homo sapiens]
          Length = 998

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 4/62 (6%)

Query: 57  GLPGSGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKRLDEDLAAYCRRRDI 116
           G P  G+ST +  +++ Y D  + VS +A      +R  F +  +++D  LA + R+R +
Sbjct: 53  GQPCGGESTRSSSVINNYLDANEPVSLEARL----SRMHFHDSQRKVDYVLAYHYRKRGV 108

Query: 117 RI 118
            +
Sbjct: 109 HL 110


>gi|18105056 vacuolar protein sorting 33A [Homo sapiens]
          Length = 596

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 6/77 (7%)

Query: 250 LHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISAL----FVTPKTTGAR-VELSE 304
           L C    C+ G      +Y ++++L+ +Y     LT+  L     + P+T G        
Sbjct: 409 LVCLQSVCNSGLKQKVLDYYKREILQ-TYGYEHILTLHNLEKAGLLKPQTGGRNNYPTIR 467

Query: 305 QQLQLWPSDVDKLSPTD 321
           + L+LW  DV++ +PTD
Sbjct: 468 KTLRLWMDDVNEQNPTD 484


>gi|118582286 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
           [Homo sapiens]
          Length = 471

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 105 EDLAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVE 149
           +D+  Y    +  + V D TN  RER   + + A ++ Y+V  +E
Sbjct: 114 KDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIE 158


>gi|84662781 DCP1 decapping enzyme homolog A [Homo sapiens]
          Length = 582

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 247 PGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFTLTISALFVT--PKTTGARVELSE 304
           PG L  +T+  + G     EE       K + S    LT+  LF T  PK   A V L  
Sbjct: 181 PG-LQPSTQLSNLGSTETLEEMPSGSQDKSAPSGHKHLTVEELFGTSLPKEQPAVVGLDS 239

Query: 305 QQLQLWPSDVDKLSPTDNLP 324
           ++++  P D  +  P   LP
Sbjct: 240 EEMERLPGDASQKEPNSFLP 259


>gi|108773784 ATP-binding cassette, sub-family E, member 1 [Homo
           sapiens]
          Length = 599

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 13/126 (10%)

Query: 55  LRGLPGSGKSTLARVIVDKYRD--GTKMVSADAYKITPGARGAFSEEY--KRLDEDLAAY 110
           L G  G GKST  +++  K +   G      D  +I    RG+  + Y  K L++DL A 
Sbjct: 108 LVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAI 167

Query: 111 CRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLS 170
            + + +  +        +  +  + +  D+ + Q ++ +     +LD   LKE+N   LS
Sbjct: 168 IKPQYVDQI----PKAAKGTVGSILDRKDETKTQAIVCQ-----QLDLTHLKERNVEDLS 218

Query: 171 ADDLKK 176
             +L++
Sbjct: 219 GGELQR 224


>gi|108773782 ATP-binding cassette, sub-family E, member 1 [Homo
           sapiens]
          Length = 599

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 13/126 (10%)

Query: 55  LRGLPGSGKSTLARVIVDKYRD--GTKMVSADAYKITPGARGAFSEEY--KRLDEDLAAY 110
           L G  G GKST  +++  K +   G      D  +I    RG+  + Y  K L++DL A 
Sbjct: 108 LVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAI 167

Query: 111 CRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQLKEKNQWQLS 170
            + + +  +        +  +  + +  D+ + Q ++ +     +LD   LKE+N   LS
Sbjct: 168 IKPQYVDQI----PKAAKGTVGSILDRKDETKTQAIVCQ-----QLDLTHLKERNVEDLS 218

Query: 171 ADDLKK 176
             +L++
Sbjct: 219 GGELQR 224


>gi|4759248 tryptophan hydroxylase 1 [Homo sapiens]
          Length = 444

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 236 MDLVTYFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKKSYSKAFT-LTISALFVTPK 294
           M+ V +F K+   + HC  +   YG    A+    +D + +   K F  L ++     P 
Sbjct: 102 METVPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPI 161

Query: 295 TTGARVELSEQQLQLWPS---DVDKLSPT 320
               +VE +E++++ W +   +++KL PT
Sbjct: 162 ---PKVEFTEEEIKTWGTVFQELNKLYPT 187


>gi|7657575 sirtuin 1 isoform a [Homo sapiens]
          Length = 747

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 40  EDTVATLLECKTLFILRGLPGSGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEE 99
           ED V  L ECK + +   L G+G S    +   + RDG     A  +   P  +  F  E
Sbjct: 244 EDAVKLLQECKKIIV---LTGAGVSVSCGIPDFRSRDGIYARLAVDFPDLPDPQAMFDIE 300

Query: 100 YKRLD 104
           Y R D
Sbjct: 301 YFRKD 305


>gi|28466983 leprecan-like 2 [Homo sapiens]
          Length = 736

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 340 EAVQTGLDLLEILR------QEKGGSRGEEVGELSRGKLYSLGNGRWMLTLAKNMEVRAI 393
           EA+Q  L  +E  R      +E+ G+  EE G  S+G LY    G W+  L         
Sbjct: 241 EALQGSLAQMESCRADCEGPEEQQGAEEEEDGAASQGGLYEAIAGHWIQVLQCRQRCVGE 300

Query: 394 FTGYYGKGKPVP 405
                G+  PVP
Sbjct: 301 TATRPGRSFPVP 312


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,934,711
Number of Sequences: 37866
Number of extensions: 776358
Number of successful extensions: 1755
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1727
Number of HSP's gapped (non-prelim): 36
length of query: 421
length of database: 18,247,518
effective HSP length: 105
effective length of query: 316
effective length of database: 14,271,588
effective search space: 4509821808
effective search space used: 4509821808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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