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Search of human proteins with 94721250
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|94721250 vesicle-associated membrane protein-associated
protein A isoform 1 [Homo sapiens]
(294 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|94721250 vesicle-associated membrane protein-associated prote... 593 e-170
gi|94721252 vesicle-associated membrane protein-associated prote... 482 e-136
gi|4759302 VAMP-associated protein B/C [Homo sapiens] 280 1e-75
gi|22749197 motile sperm domain containing 2 [Homo sapiens] 52 8e-07
gi|62912468 complement component 4 binding protein, beta chain i... 36 0.035
gi|62912466 complement component 4 binding protein, beta chain i... 36 0.035
gi|62912464 complement component 4 binding protein, beta chain i... 36 0.035
gi|62912462 complement component 4 binding protein, beta chain i... 36 0.035
gi|4502505 complement component 4 binding protein, beta chain is... 36 0.035
gi|116805342 human immunodeficiency virus type I enhancer bindin... 36 0.035
gi|21450721 enkurin [Homo sapiens] 35 0.060
gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens] 35 0.079
gi|74271888 lipin 3 [Homo sapiens] 33 0.39
gi|13122608 motile sperm domain containing 3 isoform a [Homo sap... 33 0.39
gi|93141014 motile sperm domain containing 3 isoform a [Homo sap... 33 0.39
gi|93141012 motile sperm domain containing 3 isoform a [Homo sap... 33 0.39
gi|93141016 motile sperm domain containing 3 isoform b [Homo sap... 33 0.39
gi|7662126 signal-induced proliferation-associated 1 like 1 [Hom... 32 0.51
gi|114158664 hypothetical protein LOC343505 [Homo sapiens] 32 0.67
gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo sa... 32 0.67
gi|194306660 coiled-coil domain containing 77 isoform b [Homo sa... 32 0.87
gi|194306658 coiled-coil domain containing 77 isoform b [Homo sa... 32 0.87
gi|14150165 coiled-coil domain containing 77 isoform a [Homo sap... 32 0.87
gi|194306535 coiled-coil domain containing 77 isoform b [Homo sa... 32 0.87
gi|189491628 enamelin [Homo sapiens] 31 1.1
gi|150418009 transforming, acidic coiled-coil containing protein... 31 1.1
gi|45827755 transforming, acidic coiled-coil containing protein ... 31 1.1
gi|45827753 transforming, acidic coiled-coil containing protein ... 31 1.1
gi|11119414 transforming, acidic coiled-coil containing protein ... 31 1.1
gi|50233814 zinc finger CCCH-type containing 14 isoform 3 [Homo ... 31 1.5
>gi|94721250 vesicle-associated membrane protein-associated protein
A isoform 1 [Homo sapiens]
Length = 294
Score = 593 bits (1530), Expect = e-170
Identities = 294/294 (100%), Positives = 294/294 (100%)
Query: 1 MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60
MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC
Sbjct: 1 MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60
Query: 61 VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE 120
VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE
Sbjct: 61 VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE 120
Query: 121 LMDSKLRCVFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQ 180
LMDSKLRCVFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQ
Sbjct: 121 LMDSKLRCVFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQ 180
Query: 181 EKQKNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRH 240
EKQKNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRH
Sbjct: 181 EKQKNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRH 240
Query: 241 LRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL 294
LRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL
Sbjct: 241 LRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL 294
>gi|94721252 vesicle-associated membrane protein-associated protein
A isoform 2 [Homo sapiens]
Length = 249
Score = 482 bits (1241), Expect = e-136
Identities = 249/294 (84%), Positives = 249/294 (84%), Gaps = 45/294 (15%)
Query: 1 MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60
MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC
Sbjct: 1 MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60
Query: 61 VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE 120
VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE
Sbjct: 61 VRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDE 120
Query: 121 LMDSKLRCVFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQ 180
LMDSKLRCVFEMPNENDKL
Sbjct: 121 LMDSKLRCVFEMPNENDKL----------------------------------------- 139
Query: 181 EKQKNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRH 240
NDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRH
Sbjct: 140 ----NDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRH 195
Query: 241 LRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL 294
LRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL
Sbjct: 196 LRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL 249
>gi|4759302 VAMP-associated protein B/C [Homo sapiens]
Length = 243
Score = 280 bits (715), Expect = 1e-75
Identities = 154/289 (53%), Positives = 190/289 (65%), Gaps = 48/289 (16%)
Query: 8 MAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGI 67
MAK EQ+L L+P +LKF+GPFTDVVTTNLKL NP+DR VCFKVKTTAPRRYCVRPNSGI
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI 60
Query: 68 IDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLR 127
ID G+++ VSVMLQPFDYDPNEKSKHKFMVQ++FAP +TSDMEAVWKEAKP++LMDSKLR
Sbjct: 61 IDAGASINVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLR 120
Query: 128 CVFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQEKQKNDM 187
CVFE+P ENDK +D+
Sbjct: 121 CVFELPAENDK---------------------------------------------PHDV 135
Query: 188 EPSKAVPLNASKQDGP-MPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDE-G 245
E +K + ASK + P + K S SL+DTE +K+MEECKRLQGE+ +L EEN+ ++E G
Sbjct: 136 EINKIISTTASKTETPIVSKSLSSSLDDTEVKKVMEECKRLQGEVQRLREENKQFKEEDG 195
Query: 246 LRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL 294
LR+RK S+ P S + ++ S LVV+ I +G +GK L
Sbjct: 196 LRMRKTVQSNSPISALAPTGKEEGLSTRLLALVVLFFI-VGVIIGKIAL 243
>gi|22749197 motile sperm domain containing 2 [Homo sapiens]
Length = 518
Score = 51.6 bits (122), Expect = 8e-07
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 14 ILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGST 73
+L + P +L F + T + L N + V FKV+TTAP +Y V+P++ DPG+
Sbjct: 327 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGA- 385
Query: 74 VTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNT----SDMEAVWKEAKPDELMDSKLRC 128
+V +++ P ++ +F++ ++ +++ WKE +++M+ +LRC
Sbjct: 386 -SVDIVVSPHG-GLTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC 442
>gi|62912468 complement component 4 binding protein, beta chain
isoform 1 precursor [Homo sapiens]
Length = 252
Score = 36.2 bits (82), Expect = 0.035
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 143 PPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQEKQKNDMEPSKAVPLNASKQDG 202
PPGN P N T+ + SY+ +D R V QE+Q D E S A+P+ Q+
Sbjct: 141 PPGN-PVHGYFEGNNFTLGSTISYYCED--RYYLVGVQEQQCVDGEWSSALPVCKLIQEA 197
Query: 203 PMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRD 243
P P+ L E++ L C+ ++ M +L E + +
Sbjct: 198 PKPECEKALLAFQESKNL---CEAMENFMQQLKESGMTMEE 235
>gi|62912466 complement component 4 binding protein, beta chain
isoform 2 precursor [Homo sapiens]
Length = 251
Score = 36.2 bits (82), Expect = 0.035
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 143 PPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQEKQKNDMEPSKAVPLNASKQDG 202
PPGN P N T+ + SY+ +D R V QE+Q D E S A+P+ Q+
Sbjct: 140 PPGN-PVHGYFEGNNFTLGSTISYYCED--RYYLVGVQEQQCVDGEWSSALPVCKLIQEA 196
Query: 203 PMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRD 243
P P+ L E++ L C+ ++ M +L E + +
Sbjct: 197 PKPECEKALLAFQESKNL---CEAMENFMQQLKESGMTMEE 234
>gi|62912464 complement component 4 binding protein, beta chain
isoform 1 precursor [Homo sapiens]
Length = 252
Score = 36.2 bits (82), Expect = 0.035
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 143 PPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQEKQKNDMEPSKAVPLNASKQDG 202
PPGN P N T+ + SY+ +D R V QE+Q D E S A+P+ Q+
Sbjct: 141 PPGN-PVHGYFEGNNFTLGSTISYYCED--RYYLVGVQEQQCVDGEWSSALPVCKLIQEA 197
Query: 203 PMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRD 243
P P+ L E++ L C+ ++ M +L E + +
Sbjct: 198 PKPECEKALLAFQESKNL---CEAMENFMQQLKESGMTMEE 235
>gi|62912462 complement component 4 binding protein, beta chain
isoform 2 precursor [Homo sapiens]
Length = 251
Score = 36.2 bits (82), Expect = 0.035
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 143 PPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQEKQKNDMEPSKAVPLNASKQDG 202
PPGN P N T+ + SY+ +D R V QE+Q D E S A+P+ Q+
Sbjct: 140 PPGN-PVHGYFEGNNFTLGSTISYYCED--RYYLVGVQEQQCVDGEWSSALPVCKLIQEA 196
Query: 203 PMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRD 243
P P+ L E++ L C+ ++ M +L E + +
Sbjct: 197 PKPECEKALLAFQESKNL---CEAMENFMQQLKESGMTMEE 234
>gi|4502505 complement component 4 binding protein, beta chain
isoform 1 precursor [Homo sapiens]
Length = 252
Score = 36.2 bits (82), Expect = 0.035
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 143 PPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQEKQKNDMEPSKAVPLNASKQDG 202
PPGN P N T+ + SY+ +D R V QE+Q D E S A+P+ Q+
Sbjct: 141 PPGN-PVHGYFEGNNFTLGSTISYYCED--RYYLVGVQEQQCVDGEWSSALPVCKLIQEA 197
Query: 203 PMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRD 243
P P+ L E++ L C+ ++ M +L E + +
Sbjct: 198 PKPECEKALLAFQESKNL---CEAMENFMQQLKESGMTMEE 235
>gi|116805342 human immunodeficiency virus type I enhancer binding
protein 1 [Homo sapiens]
Length = 2718
Score = 36.2 bits (82), Expect = 0.035
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 118 PDELMDSKLRCVFEMPNEN---DKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDP-- 172
P++ MD KL + E + DK+ + G T S+ N+++ P S+ K +P
Sbjct: 1100 PEQTMDPKLSTIMEQQISSAAQDKIELQRHG---TGISVIQHTNSLSRPNSFD-KPEPFE 1155
Query: 173 RGLSVLKQEKQKNDMEPSKAVPLNASKQDGPM---PKPHSVSLNDTETRKLMEECKRLQG 229
R V QE + S V + ++ P PH ++L+D +L E ++
Sbjct: 1156 RASPVSFQELNRTGKSGSLKVIGISQEESHPSRDGSHPHQLALSDALRGELQESSRKSPS 1215
Query: 230 EMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTS 271
E L + +R +R +++ ++ +++P A D S
Sbjct: 1216 ERHVLGQPSRLVRQHNIQVPEILVTEEPDRDLEAQCHDQEKS 1257
>gi|21450721 enkurin [Homo sapiens]
Length = 256
Score = 35.4 bits (80), Expect = 0.060
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 150 VTSMSSINNTVATPASYHTKDDPRGLSVLKQEKQKNDMEPSKAVPLNASKQDGPMPKPHS 209
+ S + NT A P+ + V K+ K+D+EPS VP +K+D + P
Sbjct: 99 IQSGKNFINTNAADIIMGVAKKPKPIYVDKRTGDKHDLEPSGLVPKYINKKDYGV-TPEY 157
Query: 210 VSLNDTETRKLMEECKRL------QGEMMKLSEENRHLRDEGLR 247
+ + E +K E+ R + M +LS+E R +GL+
Sbjct: 158 ICKRNEEIKKAQEDYDRYIQENLKKAAMKRLSDEEREAVLQGLK 201
>gi|186928844 Cdc42 GTPase-activating protein [Homo sapiens]
Length = 1444
Score = 35.0 bits (79), Expect = 0.079
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 154 SSINNTVATPASYHTKDDPRGLSVLKQEKQKNDMEPSKAVPLNASKQ---DGPMPKPHSV 210
SS + T PA D P L K+EK K D K+ P++A+ +GP P
Sbjct: 1237 SSTSGTTQKPAK---DDSPSSLESSKEEKPKQDPGAIKSSPVDATAPCMCEGPTLSPEPG 1293
Query: 211 SLNDTETRKLMEECKRLQGE 230
S N T+ + +C++ E
Sbjct: 1294 SSNLLSTQDAVVQCRKRMSE 1313
>gi|74271888 lipin 3 [Homo sapiens]
Length = 851
Score = 32.7 bits (73), Expect = 0.39
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 180 QEKQKNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENR 239
Q ++K+ ++P P + DG P S+S + + K E + E L E+
Sbjct: 188 QLEEKSSLQPKDIYPYS----DGEWPPQASLSAGELTSPKSDSELEVRTPEPSPLRAES- 242
Query: 240 HLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSP 272
H++ RL KVA +++P S+ R TSP
Sbjct: 243 HMQWAWGRLPKVARAERPESSVVLEGRAGATSP 275
>gi|13122608 motile sperm domain containing 3 isoform a [Homo
sapiens]
Length = 235
Score = 32.7 bits (73), Expect = 0.39
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 16 VLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVT 75
VL P DL F+ L L NP+ + F+V TAP +Y V G + P S +
Sbjct: 34 VLVFPPDLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCID 93
Query: 76 VSV 78
+ +
Sbjct: 94 IVI 96
>gi|93141014 motile sperm domain containing 3 isoform a [Homo
sapiens]
Length = 235
Score = 32.7 bits (73), Expect = 0.39
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 16 VLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVT 75
VL P DL F+ L L NP+ + F+V TAP +Y V G + P S +
Sbjct: 34 VLVFPPDLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCID 93
Query: 76 VSV 78
+ +
Sbjct: 94 IVI 96
>gi|93141012 motile sperm domain containing 3 isoform a [Homo
sapiens]
Length = 235
Score = 32.7 bits (73), Expect = 0.39
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 16 VLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVT 75
VL P DL F+ L L NP+ + F+V TAP +Y V G + P S +
Sbjct: 34 VLVFPPDLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCID 93
Query: 76 VSV 78
+ +
Sbjct: 94 IVI 96
>gi|93141016 motile sperm domain containing 3 isoform b [Homo
sapiens]
Length = 225
Score = 32.7 bits (73), Expect = 0.39
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 16 VLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVT 75
VL P DL F+ L L NP+ + F+V TAP +Y V G + P S +
Sbjct: 34 VLVFPPDLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCID 93
Query: 76 VSVMLQ 81
+ +Q
Sbjct: 94 IHYDVQ 99
>gi|7662126 signal-induced proliferation-associated 1 like 1 [Homo
sapiens]
Length = 1804
Score = 32.3 bits (72), Expect = 0.51
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 170 DDPRGLSVLKQEKQKNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQG 229
++ R LS Q D ++ P ++SK P V + + L E+ K+ +
Sbjct: 1702 ENHRPLSAASNSDQLEDQALAQMKPYSSSKDSSPT-LASKVDQLEGMLKMLREDLKKEKE 1760
Query: 230 EMMKLSEENRHLRDEGLRLRKVAH--SDK 256
+ L E +HLR++ LRL++ + SDK
Sbjct: 1761 DKAHLQAEVQHLREDNLRLQEESQNASDK 1789
>gi|114158664 hypothetical protein LOC343505 [Homo sapiens]
Length = 421
Score = 32.0 bits (71), Expect = 0.67
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 17/129 (13%)
Query: 84 DYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLGITP 143
D D N+K+K VQ AP + +A KE D L + C N + P
Sbjct: 189 DEDENDKTKELDKVQESPAP--REEQKAEEKEVPEDSLEE----CAITYSNSHGPSDSNP 242
Query: 144 PGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQEKQKNDMEPSKAVPLNASKQDGP 203
P +TS N++ S ++D+ + + E Q +D E ++G
Sbjct: 243 PHKNIKITSEEDKVNSILVVDSESSQDEWQDALNILLENQNDDEE-----------EEGK 291
Query: 204 MPKPHSVSL 212
P P V+L
Sbjct: 292 APVPPQVTL 300
>gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo
sapiens]
Length = 1925
Score = 32.0 bits (71), Expect = 0.67
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 15 LVLDPPTDLKFKGPFTDVVTTN-LKLRNPSDRKVCFKVKTTAPRR--YCVRPNSGIIDPG 71
L LD L FK + +T+ RNPS + F+ + + R V+P+ G+I P
Sbjct: 878 LKLDTHKSLYFKPTWVGCSSTSPFTFRNPSRLPLQFEWRVSEQHRKLLAVQPSRGLIQPN 937
Query: 72 STVTVSVMLQPFDYDPNEKSKHKFMV 97
+T++ + + P E++K+ F V
Sbjct: 938 ERLTLT-----WTFSPLEETKYLFQV 958
>gi|194306660 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 31.6 bits (70), Expect = 0.87
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 129 VFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQ------EK 182
V + +END+L I + + ++ ++ T A +Y K+ P +++L++ E
Sbjct: 93 VLRLYSENDRLRIRELEDKKKIQNLLALVGTDAGEVTYFCKEPPHKVTILQKTIQAVGEC 152
Query: 183 QKNDMEPSKAVPLNASKQDGPMPKPHSVSL-NDTETRKLMEECKRLQ-GEMMKLSEE 237
++++ KA P + ++ K S D +T L E + Q GE KLS E
Sbjct: 153 EQSESSAFKADPKISKRRPSRERKESSEHYQRDIQTLILQVEALQAQLGEQTKLSRE 209
>gi|194306658 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 31.6 bits (70), Expect = 0.87
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 129 VFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQ------EK 182
V + +END+L I + + ++ ++ T A +Y K+ P +++L++ E
Sbjct: 93 VLRLYSENDRLRIRELEDKKKIQNLLALVGTDAGEVTYFCKEPPHKVTILQKTIQAVGEC 152
Query: 183 QKNDMEPSKAVPLNASKQDGPMPKPHSVSL-NDTETRKLMEECKRLQ-GEMMKLSEE 237
++++ KA P + ++ K S D +T L E + Q GE KLS E
Sbjct: 153 EQSESSAFKADPKISKRRPSRERKESSEHYQRDIQTLILQVEALQAQLGEQTKLSRE 209
>gi|14150165 coiled-coil domain containing 77 isoform a [Homo
sapiens]
Length = 488
Score = 31.6 bits (70), Expect = 0.87
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 129 VFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQ------EK 182
V + +END+L I + + ++ ++ T A +Y K+ P +++L++ E
Sbjct: 125 VLRLYSENDRLRIRELEDKKKIQNLLALVGTDAGEVTYFCKEPPHKVTILQKTIQAVGEC 184
Query: 183 QKNDMEPSKAVPLNASKQDGPMPKPHSVSL-NDTETRKLMEECKRLQ-GEMMKLSEE 237
++++ KA P + ++ K S D +T L E + Q GE KLS E
Sbjct: 185 EQSESSAFKADPKISKRRPSRERKESSEHYQRDIQTLILQVEALQAQLGEQTKLSRE 241
>gi|194306535 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 31.6 bits (70), Expect = 0.87
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 129 VFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRGLSVLKQ------EK 182
V + +END+L I + + ++ ++ T A +Y K+ P +++L++ E
Sbjct: 93 VLRLYSENDRLRIRELEDKKKIQNLLALVGTDAGEVTYFCKEPPHKVTILQKTIQAVGEC 152
Query: 183 QKNDMEPSKAVPLNASKQDGPMPKPHSVSL-NDTETRKLMEECKRLQ-GEMMKLSEE 237
++++ KA P + ++ K S D +T L E + Q GE KLS E
Sbjct: 153 EQSESSAFKADPKISKRRPSRERKESSEHYQRDIQTLILQVEALQAQLGEQTKLSRE 209
>gi|189491628 enamelin [Homo sapiens]
Length = 1142
Score = 31.2 bits (69), Expect = 1.1
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 130 FEMPNENDKLGITPPGNAPTVTS-MSSINNTVATPASYH-------TKDDPRGLSVLKQE 181
FE P E D PG PT S ++ N+T P T + GL+
Sbjct: 224 FEKPKEEDPPKAESPGTEPTANSTVTETNSTQPNPKGSQGGNDTSPTGNSTPGLNTGNNP 283
Query: 182 KQKNDMEPSKAVPLNASKQDGP 203
+N + P AV NAS Q GP
Sbjct: 284 PAQNGIGPLPAV--NASGQGGP 303
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 31.2 bits (69), Expect = 1.1
Identities = 59/242 (24%), Positives = 86/242 (35%), Gaps = 46/242 (19%)
Query: 19 PPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTT--APRRYCVRPNSGIIDPGSTVTV 76
PPT K P + LR P +K K+ T +P R PN I G T T
Sbjct: 2284 PPTKKIGKKP-----VAKMPLRRPKMKKTPEKLDNTPASPPRSPAEPNDIPIAKG-TYTF 2337
Query: 77 SV------MLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAV--WKEAKPDELMDSKLRC 128
+ PF + K Q+ P+T D E+V +K + SK
Sbjct: 2338 DIDKWDDPNFNPFSSTSKMQESPKLPQQSYNFDPDTCD-ESVDPFKTSSKTPSSPSKSPA 2396
Query: 129 VFEMP------NENDKLGITPPGN---------------APTVTSMSSINNTVATPASYH 167
FE+P N D G+ P +P + +S + TPA+
Sbjct: 2397 SFEIPASAMEANGVDGDGLNKPAKKKKTPLKTDTFRVKKSPKRSPLSDPPSQDPTPAA-- 2454
Query: 168 TKDDPRGLSVLKQEKQKNDMEPSK------AVPLNASKQDGPMPKPHSVSLNDTETRKLM 221
T + P +S + + + + V L A KQD P P S +N+T+
Sbjct: 2455 TPETPPVISAVVHATDEEKLAVTNQKWTCMTVDLEADKQDYPQPSDLSTFVNETKFSSPT 2514
Query: 222 EE 223
EE
Sbjct: 2515 EE 2516
>gi|45827755 transforming, acidic coiled-coil containing protein 2
isoform b [Homo sapiens]
Length = 1094
Score = 31.2 bits (69), Expect = 1.1
Identities = 59/242 (24%), Positives = 86/242 (35%), Gaps = 46/242 (19%)
Query: 19 PPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTT--APRRYCVRPNSGIIDPGSTVTV 76
PPT K P + LR P +K K+ T +P R PN I G T T
Sbjct: 430 PPTKKIGKKP-----VAKMPLRRPKMKKTPEKLDNTPASPPRSPAEPNDIPIAKG-TYTF 483
Query: 77 SV------MLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAV--WKEAKPDELMDSKLRC 128
+ PF + K Q+ P+T D E+V +K + SK
Sbjct: 484 DIDKWDDPNFNPFSSTSKMQESPKLPQQSYNFDPDTCD-ESVDPFKTSSKTPSSPSKSPA 542
Query: 129 VFEMP------NENDKLGITPPGN---------------APTVTSMSSINNTVATPASYH 167
FE+P N D G+ P +P + +S + TPA+
Sbjct: 543 SFEIPASAMEANGVDGDGLNKPAKKKKTPLKTDTFRVKKSPKRSPLSDPPSQDPTPAA-- 600
Query: 168 TKDDPRGLSVLKQEKQKNDMEPSK------AVPLNASKQDGPMPKPHSVSLNDTETRKLM 221
T + P +S + + + + V L A KQD P P S +N+T+
Sbjct: 601 TPETPPVISAVVHATDEEKLAVTNQKWTCMTVDLEADKQDYPQPSDLSTFVNETKFSSPT 660
Query: 222 EE 223
EE
Sbjct: 661 EE 662
>gi|45827753 transforming, acidic coiled-coil containing protein 2
isoform c [Homo sapiens]
Length = 996
Score = 31.2 bits (69), Expect = 1.1
Identities = 59/242 (24%), Positives = 86/242 (35%), Gaps = 46/242 (19%)
Query: 19 PPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTT--APRRYCVRPNSGIIDPGSTVTV 76
PPT K P + LR P +K K+ T +P R PN I G T T
Sbjct: 362 PPTKKIGKKP-----VAKMPLRRPKMKKTPEKLDNTPASPPRSPAEPNDIPIAKG-TYTF 415
Query: 77 SV------MLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAV--WKEAKPDELMDSKLRC 128
+ PF + K Q+ P+T D E+V +K + SK
Sbjct: 416 DIDKWDDPNFNPFSSTSKMQESPKLPQQSYNFDPDTCD-ESVDPFKTSSKTPSSPSKSPA 474
Query: 129 VFEMP------NENDKLGITPPGN---------------APTVTSMSSINNTVATPASYH 167
FE+P N D G+ P +P + +S + TPA+
Sbjct: 475 SFEIPASAMEANGVDGDGLNKPAKKKKTPLKTDTFRVKKSPKRSPLSDPPSQDPTPAA-- 532
Query: 168 TKDDPRGLSVLKQEKQKNDMEPSK------AVPLNASKQDGPMPKPHSVSLNDTETRKLM 221
T + P +S + + + + V L A KQD P P S +N+T+
Sbjct: 533 TPETPPVISAVVHATDEEKLAVTNQKWTCMTVDLEADKQDYPQPSDLSTFVNETKFSSPT 592
Query: 222 EE 223
EE
Sbjct: 593 EE 594
>gi|11119414 transforming, acidic coiled-coil containing protein 2
isoform d [Homo sapiens]
Length = 1026
Score = 31.2 bits (69), Expect = 1.1
Identities = 59/242 (24%), Positives = 86/242 (35%), Gaps = 46/242 (19%)
Query: 19 PPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTT--APRRYCVRPNSGIIDPGSTVTV 76
PPT K P + LR P +K K+ T +P R PN I G T T
Sbjct: 362 PPTKKIGKKP-----VAKMPLRRPKMKKTPEKLDNTPASPPRSPAEPNDIPIAKG-TYTF 415
Query: 77 SV------MLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAV--WKEAKPDELMDSKLRC 128
+ PF + K Q+ P+T D E+V +K + SK
Sbjct: 416 DIDKWDDPNFNPFSSTSKMQESPKLPQQSYNFDPDTCD-ESVDPFKTSSKTPSSPSKSPA 474
Query: 129 VFEMP------NENDKLGITPPGN---------------APTVTSMSSINNTVATPASYH 167
FE+P N D G+ P +P + +S + TPA+
Sbjct: 475 SFEIPASAMEANGVDGDGLNKPAKKKKTPLKTDTFRVKKSPKRSPLSDPPSQDPTPAA-- 532
Query: 168 TKDDPRGLSVLKQEKQKNDMEPSK------AVPLNASKQDGPMPKPHSVSLNDTETRKLM 221
T + P +S + + + + V L A KQD P P S +N+T+
Sbjct: 533 TPETPPVISAVVHATDEEKLAVTNQKWTCMTVDLEADKQDYPQPSDLSTFVNETKFSSPT 592
Query: 222 EE 223
EE
Sbjct: 593 EE 594
>gi|50233814 zinc finger CCCH-type containing 14 isoform 3 [Homo
sapiens]
Length = 571
Score = 30.8 bits (68), Expect = 1.5
Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 85 YDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLGITPP 144
YD ++ V+ + P + D+ + E PD+L+D L V E P K
Sbjct: 113 YDDGAATRLMSTVKPLREPAPSEDVIDIKPE--PDDLIDEDLNFVQENPLSQKK------ 164
Query: 145 GNAPTVT---SMSSINNTVATPASYHTKDDPRGLSVLKQEKQKNDMEPSKAVPLNAS--K 199
PTVT S + + P + D L+ L+ ++Q+N + +K + + +S
Sbjct: 165 ---PTVTLTYGSSRPSIEIYRPPASRNADSGVHLNRLQFQQQQNSIHAAKQLDMQSSWVY 221
Query: 200 QDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKV 251
+ G + +P +++ + + + E + DE R RK+
Sbjct: 222 ETGRLCEP-----------EVLNSLEETYSPFFRNNSEKMSMEDENFRKRKL 262
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,636,904
Number of Sequences: 37866
Number of extensions: 594780
Number of successful extensions: 1863
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 1826
Number of HSP's gapped (non-prelim): 103
length of query: 294
length of database: 18,247,518
effective HSP length: 101
effective length of query: 193
effective length of database: 14,423,052
effective search space: 2783649036
effective search space used: 2783649036
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.