TRPV6 12827

Name: TRPV6	Sequence: fasta or formatted (725aa)		NCBI GI: 21314682
Description: transient receptor potential cation channel, subfamily V, member 6		Referenced in: Calcium and TRP Cation Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 50 2 C cysteine 2.1 15 2 D aspartate 4.6 33 2 E glutamate 5.8 42 2 F phenylalanine 4.7 34 2 G glycine 5.8 42 2 H histidine 2.3 17 1 I isoleucine 6.3 46 3 K lysine 3.3 24 2 L leucine 13.4 97 3 M methionine 4.1 30 2 N asparagine 3.3 24 2 P proline 4.3 31 1 Q glutamine 4.7 34 2 R arginine 7.2 52 2 S serine 5.1 37 2 T threonine 5.4 39 2 V valine 5.4 39 2 W tryptophan 1.9 14 1 Y tyrosine 3.4 25 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transient receptor potential cation channel, subfami... TRPV5 0.726 transient receptor potential cation channel, subfami... TRPV4 0.170 transient receptor potential cation channel, subfami... TRPV3 0.155 transient receptor potential cation channel, subfami... TRPV1 0.151 transient receptor potential cation channel, subfami... TRPV1 0.151 transient receptor potential cation channel, subfami... TRPV1 0.151 transient receptor potential cation channel, subfami... TRPV1 0.151 transient receptor potential cation channel, subfami... TRPV2 0.139 transient receptor potential cation channel, subfami... TRPV4 0.127 transient receptor potential cation channel, subfami... ANK1 0.034 ankyrin 1 isoform 9 ANK1 0.034 ankyrin 1 isoform 1 ANK1 0.034 ankyrin 1 isoform 3 ANK1 0.034 ankyrin 1 isoform 2 ANK1 0.034 ankyrin 1 isoform 4 TRPA1 0.028 ankyrin-like protein 1 ANK2 0.028 ankyrin 2 isoform 3 ANK2 0.028 ankyrin 2 isoform 2 ANK2 0.028 ankyrin 2 isoform 1 RAI14 0.027 retinoic acid induced 14 isoform b RAI14 0.024 retinoic acid induced 14 isoform d RAI14 0.024 retinoic acid induced 14 isoform c RAI14 0.024 retinoic acid induced 14 isoform a RAI14 0.024 retinoic acid induced 14 isoform a RAI14 0.024 retinoic acid induced 14 isoform a ANKRD44 0.024 ankyrin repeat domain 44 ANKRD28 0.023 ankyrin repeat domain 28 ANK3 0.023 ankyrin 3 isoform 1 BCL3 0.022 B-cell CLL/lymphoma 3 DAPK1 0.022 death-associated protein kinase 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.