TRPC6 33407

Name: TRPC6	Sequence: fasta or formatted (931aa)		NCBI GI: 5730102
Description: transient receptor potential cation channel, subfamily C, member 6		Referenced in: Calcium and TRP Cation Channels DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 70 3 C cysteine 1.6 15 1 D aspartate 4.6 43 2 E glutamate 7.8 73 3 F phenylalanine 5.5 51 1 G glycine 5.2 48 1 H histidine 2.0 19 1 I isoleucine 6.2 58 2 K lysine 6.8 63 2 L leucine 11.2 104 3 M methionine 3.1 29 1 N asparagine 5.0 47 2 P proline 3.7 34 2 Q glutamine 4.0 37 3 R arginine 4.8 45 2 S serine 7.5 70 2 T threonine 3.0 28 2 V valine 5.3 49 2 W tryptophan 1.4 13 1 Y tyrosine 3.8 35 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transient receptor potential cation channel, subfamil... TRPC7 0.683 transient receptor potential cation channel, subfamil... TRPC3 0.667 transient receptor potential cation channel, subfam... TRPC3 0.667 transient receptor potential cation channel, subfamil... TRPC4 0.278 transient receptor potential cation channel, subfam... TRPC4 0.277 transient receptor potential cation channel, subfam... TRPC4 0.277 transient receptor potential cation channel, subfamil... TRPC5 0.269 transient receptor potential cation channel, subfamil... TRPC4 0.268 transient receptor potential cation channel, subfam... LOC649660 0.260 PREDICTED: similar to transient receptor potential ... TRPC4 0.225 transient receptor potential cation channel, subfam... TRPC1 0.223 transient receptor potential cation channel, subfamil... TRPC4 0.166 transient receptor potential cation channel, subfam... LOC100292661 0.144 PREDICTED: similar to transient receptor potential ... LOC100288724 0.144 PREDICTED: similar to transient receptor potential ... LOC100288724 0.144 PREDICTED: hypothetical protein XP_002342847, parti... LOC100288724 0.144 PREDICTED: similar to transient receptor potential ... TRPM2 0.027 transient receptor potential cation channel, subfamil... TRPM1 0.022 transient receptor potential cation channel, subfami... TRPM7 0.020 transient receptor potential cation channel, subfam... PKD2 0.020 polycystin 2 TRPM8 0.018 transient receptor potential cation channel, subfam... PKD2L2 0.017 polycystic kidney disease 2-like 2 PKD2L1 0.016 polycystic kidney disease 2-like 1 TRPM6 0.016 transient receptor potential cation channel, subfami... TRPM3 0.016 transient receptor potential cation channel, subfam... TRPM3 0.016 transient receptor potential cation channel, subfam... TRPM3 0.016 transient receptor potential cation channel, subfam... TRPM3 0.016 transient receptor potential cation channel, subfam... TRPM3 0.016 transient receptor potential cation channel, subfam... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.