TRPC1 29616

Name: TRPC1	Sequence: fasta or formatted (759aa)		NCBI GI: 4507685
Description: transient receptor potential cation channel, subfamily C, member 1		Referenced in: Calcium and TRP Cation Channels
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 41 2 C cysteine 2.5 19 2 D aspartate 4.9 37 2 E glutamate 5.9 45 2 F phenylalanine 5.9 45 2 G glycine 3.8 29 1 H histidine 2.0 15 1 I isoleucine 5.5 42 2 K lysine 6.9 52 2 L leucine 13.3 101 4 M methionine 3.4 26 2 N asparagine 5.0 38 2 P proline 3.2 24 3 Q glutamine 3.8 29 2 R arginine 4.7 36 2 S serine 8.0 61 4 T threonine 4.7 36 2 V valine 5.5 42 4 W tryptophan 1.4 11 1 Y tyrosine 4.0 30 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transient receptor potential cation channel, subfamil... TRPC4 0.407 transient receptor potential cation channel, subfam... TRPC4 0.407 transient receptor potential cation channel, subfamil... TRPC4 0.406 transient receptor potential cation channel, subfam... TRPC5 0.400 transient receptor potential cation channel, subfamil... TRPC4 0.392 transient receptor potential cation channel, subfam... TRPC4 0.337 transient receptor potential cation channel, subfam... TRPC6 0.272 transient receptor potential cation channel, subfamil... TRPC3 0.268 transient receptor potential cation channel, subfam... TRPC3 0.268 transient receptor potential cation channel, subfamil... TRPC7 0.259 transient receptor potential cation channel, subfamil... TRPC4 0.256 transient receptor potential cation channel, subfam... LOC649660 0.087 PREDICTED: similar to transient receptor potential ... TRPM2 0.039 transient receptor potential cation channel, subfamil... LOC100292661 0.026 PREDICTED: similar to transient receptor potential ... LOC100288724 0.026 PREDICTED: similar to transient receptor potential ... LOC100288724 0.026 PREDICTED: hypothetical protein XP_002342847, parti... LOC100288724 0.026 PREDICTED: similar to transient receptor potential ... TRPM8 0.025 transient receptor potential cation channel, subfam... TRPM1 0.022 transient receptor potential cation channel, subfami... TRPM3 0.015 transient receptor potential cation channel, subfam... TRPM3 0.015 transient receptor potential cation channel, subfam... TRPM3 0.015 transient receptor potential cation channel, subfam... TRPM3 0.015 transient receptor potential cation channel, subfam... TRPM3 0.015 transient receptor potential cation channel, subfam... TRPM3 0.015 transient receptor potential cation channel, subfam... TRPM3 0.015 transient receptor potential cation channel, subfam... TRPV1 0.014 transient receptor potential cation channel, subfami... TRPV1 0.014 transient receptor potential cation channel, subfami... TRPV1 0.014 transient receptor potential cation channel, subfami... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.