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Search of human proteins with 94538339
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|94538339 signal-regulatory protein gamma isoform 3 precursor
[Homo sapiens]
(276 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ... 562 e-160
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ... 511 e-145
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 433 e-122
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 422 e-118
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi... 394 e-110
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi... 394 e-110
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi... 394 e-110
gi|94538337 signal-regulatory protein gamma isoform 2 precursor ... 298 5e-81
gi|144953878 signal-regulatory protein beta 1 isoform 2 precurso... 236 1e-62
gi|239751927 PREDICTED: similar to signal-regulatory protein bet... 200 1e-51
gi|169217521 PREDICTED: similar to signal-regulatory protein bet... 197 1e-50
gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens] 157 1e-38
gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo ... 157 1e-38
gi|30425382 signal-regulatory protein delta [Homo sapiens] 139 3e-33
gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo ... 114 7e-26
gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo sa... 96 3e-20
gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo sa... 92 4e-19
gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens] 52 6e-07
gi|11056046 cell adhesion molecule 3 isoform 1 [Homo sapiens] 52 6e-07
gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens] 52 7e-07
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 47 2e-05
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 47 2e-05
gi|8393638 F11 receptor precursor [Homo sapiens] 47 2e-05
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 46 4e-05
gi|239752604 PREDICTED: similar to immunoglobulin lambda-like po... 45 5e-05
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 45 9e-05
gi|4885123 CD80 antigen precursor [Homo sapiens] 43 3e-04
gi|157739930 TAP binding protein-like [Homo sapiens] 43 3e-04
gi|32699028 V-set and immunoglobulin domain containing 1 [Homo s... 42 4e-04
gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo ... 42 6e-04
>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
[Homo sapiens]
Length = 276
Score = 562 bits (1448), Expect = e-160
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP 60
MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP 60
Query: 61 VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV 120
VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV
Sbjct: 61 VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV 120
Query: 121 KFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITL 180
KFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITL
Sbjct: 121 KFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITL 180
Query: 181 KWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRG 240
KWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRG
Sbjct: 181 KWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRG 240
Query: 241 TANLSEAIRGPASSLTALLLIAVLLGPIYVPWKQKT 276
TANLSEAIRGPASSLTALLLIAVLLGPIYVPWKQKT
Sbjct: 241 TANLSEAIRGPASSLTALLLIAVLLGPIYVPWKQKT 276
>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
[Homo sapiens]
Length = 387
Score = 511 bits (1316), Expect = e-145
Identities = 250/251 (99%), Positives = 250/251 (99%)
Query: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP 60
MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP 60
Query: 61 VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV 120
VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV
Sbjct: 61 VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV 120
Query: 121 KFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITL 180
KFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITL
Sbjct: 121 KFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITL 180
Query: 181 KWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRG 240
KWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRG
Sbjct: 181 KWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRG 240
Query: 241 TANLSEAIRGP 251
TANLSEAIR P
Sbjct: 241 TANLSEAIRVP 251
Score = 71.6 bits (174), Expect = 7e-13
Identities = 72/259 (27%), Positives = 102/259 (39%), Gaps = 59/259 (22%)
Query: 71 GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENV 130
GPG E+ K + + T + + F+ +P D+ +K+ K E
Sbjct: 135 GPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDI----TLKWFKNGNELS 190
Query: 131 EFKSG---PGTEMALGAKPSAPVVLGP-----------------------------AART 158
+F++ G +A + +A VVL P A R
Sbjct: 191 DFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRV 250
Query: 159 TPE-----------HTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSI 207
P + V+ TC+ F P+ + L W +NGN + + Y+
Sbjct: 251 PPTLEVTQQPMRVGNQVNVTCQVRKFYPQSLQLTWSENGNVCQRETASTLTENKDGTYNW 310
Query: 208 RSTARVVLDPWDVRSQVI--CEVAHVTLQGDPLRGTANL--------SEAIRGPASSLTA 257
S V + D R V+ C+V H R + S+A GPASSLTA
Sbjct: 311 TSWFLVNIS--DQRDDVVLTCQVKHDGQLAVSKRLALEVTVHQKDQSSDATPGPASSLTA 368
Query: 258 LLLIAVLLGPIYVPWKQKT 276
LLLIAVLLGPIYVPWKQKT
Sbjct: 369 LLLIAVLLGPIYVPWKQKT 387
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 433 bits (1114), Expect = e-122
Identities = 211/252 (83%), Positives = 228/252 (90%), Gaps = 1/252 (0%)
Query: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
MPVPASWPH P PFLL+TLLLG LT VAGEEELQ+IQP+K + V G++ATLHCTVTSL+
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEEELQVIQPDKSISVAAGESATLHCTVTSLI 60
Query: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
PVGP+ WFRG GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIS+ITPAD GTYYC
Sbjct: 61 PVGPIQWFRGAGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISNITPADAGTYYC 120
Query: 120 VKFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDIT 179
VKFRKGSP++VEFKSG GTE+++ AKPSAPVV GPAAR TP+HTVSFTCESHGFSPRDIT
Sbjct: 121 VKFRKGSPDHVEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDIT 180
Query: 180 LKWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLR 239
LKWFKNGNELSDFQTNVDP G SV+YSI STA+VVL DV SQVICEVAHVTLQGDPLR
Sbjct: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR 240
Query: 240 GTANLSEAIRGP 251
GTANLSE IR P
Sbjct: 241 GTANLSETIRVP 252
Score = 45.8 bits (107), Expect = 4e-05
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 161 EHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDV 220
E+ V+ TC+ F P+ + L W +NGN + + Y+ S V +
Sbjct: 265 ENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTLTENKDGTYNWMSWLLVNVSAHRD 324
Query: 221 RSQVICEVAH----VTLQGDPLRGTANLSE----AIRGPASSLTALLLIAVLLGP----- 267
++ C+V H + L+ +A+ E GPA + A LLIA LLGP
Sbjct: 325 DVKLTCQVEHDGQPAVSKSHDLKVSAHPKEQGSNTAPGPALASAAPLLIAFLLGPKVLLV 384
Query: 268 -----IYVPWKQK 275
IYV WKQK
Sbjct: 385 VGVSVIYVYWKQK 397
>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
[Homo sapiens]
Length = 398
Score = 422 bits (1085), Expect = e-118
Identities = 204/252 (80%), Positives = 225/252 (89%), Gaps = 1/252 (0%)
Query: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
MPVPASWPH P PFLL+TLLLG LT VAGE+ELQ+IQPEK + V G++ATL C +TSL+
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
Query: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
PVGP++WFRG G GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYC
Sbjct: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
Query: 120 VKFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDIT 179
VKFRKGSP++VEFKSG GTE+++ AKPSAPVV GPA R TPEHTVSFTCESHGFSPRDIT
Sbjct: 121 VKFRKGSPDDVEFKSGAGTELSVRAKPSAPVVSGPAVRATPEHTVSFTCESHGFSPRDIT 180
Query: 180 LKWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLR 239
LKWFKNGNELSDFQTNVDP G SV+YSI STARVVL DV SQVICE+AH+TLQGDPLR
Sbjct: 181 LKWFKNGNELSDFQTNVDPAGDSVSYSIHSTARVVLTRGDVHSQVICEIAHITLQGDPLR 240
Query: 240 GTANLSEAIRGP 251
GTANLSEAIR P
Sbjct: 241 GTANLSEAIRVP 252
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 32/140 (22%)
Query: 161 EHTVSFTCESHGFSPRDITLKWFKNGN-----ELSDFQTNVDPTGQSVAYSIRSTARVVL 215
E+ + TC+ F PR + L W +NGN S N D T +++ + +T
Sbjct: 265 ENQANVTCQVSNFYPRGLQLTWLENGNVSRTETASTLIENKDGTYNWMSWLLVNTCA--- 321
Query: 216 DPWDVRSQVI--CEVAHVTLQGDPLRGTANLSEAIRGPASSL--------TALLLIAVLL 265
R V+ C+V H Q +S + S + TA LL+A+LL
Sbjct: 322 ----HRDDVVLTCQVEHDGQQAVSKSYALEISAHQKEHGSDITHEAALAPTAPLLVALLL 377
Query: 266 GP----------IYVPWKQK 275
GP IY+ WKQK
Sbjct: 378 GPKLLLVVGVSAIYICWKQK 397
>gi|18426911 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 394 bits (1013), Expect = e-110
Identities = 194/242 (80%), Positives = 211/242 (87%), Gaps = 2/242 (0%)
Query: 12 GPFLLLTLLLGL--TEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRG 69
GP L L L + VAGEEELQ+IQP+K +LV G+TATL CT TSL+PVGP+ WFRG
Sbjct: 12 GPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRG 71
Query: 70 VGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPEN 129
GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRI +ITPAD GTYYCVKFRKGSP++
Sbjct: 72 AGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDD 131
Query: 130 VEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNEL 189
VEFKSG GTE+++ AKPSAPVV GPAAR TP+HTVSFTCESHGFSPRDITLKWFKNGNEL
Sbjct: 132 VEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNEL 191
Query: 190 SDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIR 249
SDFQTNVDP G+SV+YSI STA+VVL DV SQVICEVAHVTLQGDPLRGTANLSE IR
Sbjct: 192 SDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIR 251
Query: 250 GP 251
P
Sbjct: 252 VP 253
Score = 29.6 bits (65), Expect = 3.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 161 EHTVSFTCESHGFSPRDITLKWFKNGN 187
E+ V+ TC+ F P+ + L W +NGN
Sbjct: 266 ENQVNVTCQVRKFYPQRLQLTWLENGN 292
>gi|91105767 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 394 bits (1013), Expect = e-110
Identities = 194/242 (80%), Positives = 211/242 (87%), Gaps = 2/242 (0%)
Query: 12 GPFLLLTLLLGL--TEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRG 69
GP L L L + VAGEEELQ+IQP+K +LV G+TATL CT TSL+PVGP+ WFRG
Sbjct: 12 GPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRG 71
Query: 70 VGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPEN 129
GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRI +ITPAD GTYYCVKFRKGSP++
Sbjct: 72 AGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDD 131
Query: 130 VEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNEL 189
VEFKSG GTE+++ AKPSAPVV GPAAR TP+HTVSFTCESHGFSPRDITLKWFKNGNEL
Sbjct: 132 VEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNEL 191
Query: 190 SDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIR 249
SDFQTNVDP G+SV+YSI STA+VVL DV SQVICEVAHVTLQGDPLRGTANLSE IR
Sbjct: 192 SDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIR 251
Query: 250 GP 251
P
Sbjct: 252 VP 253
Score = 29.6 bits (65), Expect = 3.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 161 EHTVSFTCESHGFSPRDITLKWFKNGN 187
E+ V+ TC+ F P+ + L W +NGN
Sbjct: 266 ENQVNVTCQVRKFYPQRLQLTWLENGN 292
>gi|91105764 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 394 bits (1013), Expect = e-110
Identities = 194/242 (80%), Positives = 211/242 (87%), Gaps = 2/242 (0%)
Query: 12 GPFLLLTLLLGL--TEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRG 69
GP L L L + VAGEEELQ+IQP+K +LV G+TATL CT TSL+PVGP+ WFRG
Sbjct: 12 GPLLCLLLAASCAWSGVAGEEELQVIQPDKSVLVAAGETATLRCTATSLIPVGPIQWFRG 71
Query: 70 VGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPEN 129
GPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRI +ITPAD GTYYCVKFRKGSP++
Sbjct: 72 AGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRIGNITPADAGTYYCVKFRKGSPDD 131
Query: 130 VEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNEL 189
VEFKSG GTE+++ AKPSAPVV GPAAR TP+HTVSFTCESHGFSPRDITLKWFKNGNEL
Sbjct: 132 VEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNEL 191
Query: 190 SDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIR 249
SDFQTNVDP G+SV+YSI STA+VVL DV SQVICEVAHVTLQGDPLRGTANLSE IR
Sbjct: 192 SDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIR 251
Query: 250 GP 251
P
Sbjct: 252 VP 253
Score = 29.6 bits (65), Expect = 3.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 161 EHTVSFTCESHGFSPRDITLKWFKNGN 187
E+ V+ TC+ F P+ + L W +NGN
Sbjct: 266 ENQVNVTCQVRKFYPQRLQLTWLENGN 292
>gi|94538337 signal-regulatory protein gamma isoform 2 precursor
[Homo sapiens]
Length = 170
Score = 298 bits (762), Expect = 5e-81
Identities = 148/161 (91%), Positives = 150/161 (93%), Gaps = 7/161 (4%)
Query: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP 60
MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP
Sbjct: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP 60
Query: 61 VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV 120
VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV
Sbjct: 61 VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV 120
Query: 121 KFRKGSPENVEFKSGPGTEMALGAKPSA-------PVVLGP 154
KFRKGSPENVEFKSGPGTEMALG S+ V+LGP
Sbjct: 121 KFRKGSPENVEFKSGPGTEMALGGPASSLTALLLIAVLLGP 161
Score = 58.5 bits (140), Expect = 6e-09
Identities = 28/30 (93%), Positives = 29/30 (96%)
Query: 247 AIRGPASSLTALLLIAVLLGPIYVPWKQKT 276
A+ GPASSLTALLLIAVLLGPIYVPWKQKT
Sbjct: 141 ALGGPASSLTALLLIAVLLGPIYVPWKQKT 170
>gi|144953878 signal-regulatory protein beta 1 isoform 2 precursor
[Homo sapiens]
Length = 181
Score = 236 bits (603), Expect = 1e-62
Identities = 116/162 (71%), Positives = 137/162 (84%), Gaps = 8/162 (4%)
Query: 1 MPVPASWPHPPGPFLLLTLLLG-LTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLL 59
MPVPASWPH P PFLL+TLLLG LT VAGE+ELQ+IQPEK + V G++ATL C +TSL+
Sbjct: 1 MPVPASWPHLPSPFLLMTLLLGRLTGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLI 60
Query: 60 PVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYC 119
PVGP++WFRG G GRELIYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYC
Sbjct: 61 PVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYC 120
Query: 120 VKFRKGSPENVEFKSGPGTEMAL---GAKPSAP----VVLGP 154
VKFRKGSP++VEFKSG GTE+++ P+AP ++LGP
Sbjct: 121 VKFRKGSPDDVEFKSGAGTELSVREAALAPTAPLLVALLLGP 162
Score = 29.6 bits (65), Expect = 3.0
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 10/39 (25%)
Query: 247 AIRGPASSLTALLLIAVLLGP----------IYVPWKQK 275
++R A + TA LL+A+LLGP IY+ WKQK
Sbjct: 142 SVREAALAPTAPLLVALLLGPKLLLVVGVSAIYICWKQK 180
>gi|239751927 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 136
Score = 200 bits (509), Expect = 1e-51
Identities = 93/131 (70%), Positives = 112/131 (85%)
Query: 17 LTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGREL 76
+T L VAGE+ELQ+IQPEK + V G++ATL C +TSL+PVGP++WFRG G GREL
Sbjct: 1 MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
Query: 77 IYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGP 136
IYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYCVKFRKGSP++VEFKSG
Sbjct: 61 IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
Query: 137 GTEMALGAKPS 147
GTE+++ A P+
Sbjct: 121 GTELSVRADPA 131
>gi|169217521 PREDICTED: similar to signal-regulatory protein beta 1
[Homo sapiens]
Length = 160
Score = 197 bits (500), Expect = 1e-50
Identities = 91/126 (72%), Positives = 109/126 (86%)
Query: 17 LTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGREL 76
+T L VAGE+ELQ+IQPEK + V G++ATL C +TSL+PVGP++WFRG G GREL
Sbjct: 1 MTALCSFPGVAGEDELQVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGREL 60
Query: 77 IYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGP 136
IYNQKEGHFPRVTTVS+LTKRNN+DFSI IS+ITPAD GTYYCVKFRKGSP++VEFKSG
Sbjct: 61 IYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGA 120
Query: 137 GTEMAL 142
GTE+++
Sbjct: 121 GTELSV 126
>gi|239757417 PREDICTED: similar to hCG2019710 [Homo sapiens]
Length = 651
Score = 157 bits (396), Expect = 1e-38
Identities = 77/122 (63%), Positives = 94/122 (77%), Gaps = 1/122 (0%)
Query: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
L + VAGEE LQ+IQPE + V G+ ATL+CTVTSLLPVGP+ WFRG PG++LIY+
Sbjct: 505 LSVHRVAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSP 563
Query: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
K H PRVTT+SD KRN+ D+SIRISSIT D GTYYC+K R+ P NVE KSGPGT+M
Sbjct: 564 KRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQM 623
Query: 141 AL 142
++
Sbjct: 624 SV 625
Score = 114 bits (286), Expect = 7e-26
Identities = 60/122 (49%), Positives = 77/122 (63%), Gaps = 27/122 (22%)
Query: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
+G T AGEEELQ+IQPEK WF+G G+ELIY+
Sbjct: 413 IGSTGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSS 446
Query: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
K GHFP++ +SD+TKRNN DFS+ I+SIT A+ GTY CVKF KG P+ +E KSGPGTE+
Sbjct: 447 KGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPD-MELKSGPGTEL 505
Query: 141 AL 142
++
Sbjct: 506 SV 507
Score = 57.0 bits (136), Expect = 2e-08
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 140 MALGAKPSAPVV--LGPAARTTPEHTVSFTCESHGFS----PRDITLKWFKNGNELSDFQ 193
+ LG P + GP+ RT+P +V F C + F+ RD + W K+ +E
Sbjct: 16 LLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASA 75
Query: 194 TNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRGP 251
+ P + I S A V L DV S++ CEV H L +PL+ T NLS+A R P
Sbjct: 76 QRLVPDNGGNDF-ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNP 131
Score = 54.7 bits (130), Expect = 9e-08
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 153 GPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRSTAR 212
GP R+ P + T S GFS +T+ W KN +EL + QT+V +G + Y++ S+
Sbjct: 190 GPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHT--YNVTSSVL 247
Query: 213 VVLDPWDVRSQVICEVAH 230
V L DV S V+C V H
Sbjct: 248 VPLMDDDVFSHVVCHVEH 265
>gi|239751934 PREDICTED: hypothetical protein XP_002348043 [Homo
sapiens]
Length = 651
Score = 157 bits (396), Expect = 1e-38
Identities = 77/122 (63%), Positives = 94/122 (77%), Gaps = 1/122 (0%)
Query: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
L + VAGEE LQ+IQPE + V G+ ATL+CTVTSLLPVGP+ WFRG PG++LIY+
Sbjct: 505 LSVHRVAGEE-LQVIQPEAFVSVAAGEMATLNCTVTSLLPVGPIQWFRGACPGQKLIYSP 563
Query: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
K H PRVTT+SD KRN+ D+SIRISSIT D GTYYC+K R+ P NVE KSGPGT+M
Sbjct: 564 KRCHSPRVTTISDQRKRNSTDYSIRISSITLEDAGTYYCMKLRRAIPANVEIKSGPGTQM 623
Query: 141 AL 142
++
Sbjct: 624 SV 625
Score = 114 bits (286), Expect = 7e-26
Identities = 60/122 (49%), Positives = 77/122 (63%), Gaps = 27/122 (22%)
Query: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
+G T AGEEELQ+IQPEK WF+G G+ELIY+
Sbjct: 413 IGSTGAAGEEELQVIQPEK--------------------------WFKGTETGQELIYSS 446
Query: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
K GHFP++ +SD+TKRNN DFS+ I+SIT A+ GTY CVKF KG P+ +E KSGPGTE+
Sbjct: 447 KGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPD-MELKSGPGTEL 505
Query: 141 AL 142
++
Sbjct: 506 SV 507
Score = 57.0 bits (136), Expect = 2e-08
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 140 MALGAKPSAPVV--LGPAARTTPEHTVSFTCESHGFS----PRDITLKWFKNGNELSDFQ 193
+ LG P + GP+ RT+P +V F C + F+ RD + W K+ +E
Sbjct: 16 LLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASA 75
Query: 194 TNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRGP 251
+ P + I S A V L DV S++ CEV H L +PL+ T NLS+A R P
Sbjct: 76 QRLVPDNGGNDF-ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNP 131
Score = 54.7 bits (130), Expect = 9e-08
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 153 GPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRSTAR 212
GP R+ P + T S GFS +T+ W KN +EL + QT+V +G + Y++ S+
Sbjct: 190 GPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHT--YNVTSSVL 247
Query: 213 VVLDPWDVRSQVICEVAH 230
V L DV S V+C V H
Sbjct: 248 VPLMDDDVFSHVVCHVEH 265
>gi|30425382 signal-regulatory protein delta [Homo sapiens]
Length = 197
Score = 139 bits (350), Expect = 3e-33
Identities = 82/171 (47%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Query: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLP 60
MP+PAS HPP P LLL LLL L V +Q Q E V+ G++ L C+V LP
Sbjct: 1 MPIPASPLHPPLPSLLLYLLLELAGVTHVFHVQ--QTEMSQTVSTGESIILSCSVPDTLP 58
Query: 61 VGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCV 120
GPVLWF+G GP R+LIYN K+G+FPRV + D TK N DFS RI I+ AD GTYYCV
Sbjct: 59 NGPVLWFKGTGPNRKLIYNFKQGNFPRVKEIGDTTKPGNTDFSTRIREISLADAGTYYCV 118
Query: 121 KFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAART-TPEHTVSFTCES 170
KF KG E++SG GT++ + + P PA R + H + TC S
Sbjct: 119 KFIKGRAIK-EYQSGRGTQVFVTEQNPRPPKNRPAGRAGSRAHHDAHTCLS 168
>gi|239746419 PREDICTED: hypothetical protein XP_002344218 [Homo
sapiens]
Length = 532
Score = 114 bits (286), Expect = 7e-26
Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 27/134 (20%)
Query: 21 LGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQ 80
+G T AGEEEL++IQPEK WF+G G+ELIY+
Sbjct: 413 IGSTGAAGEEELRVIQPEK--------------------------WFKGTETGQELIYSS 446
Query: 81 KEGHFPRVTTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEM 140
K GHFP++ +SD+TKRNN DFS+ I+SIT A+ GTY CVKF KG P+ +E KSGPGTE+
Sbjct: 447 KGGHFPKIACISDITKRNNTDFSMCITSITRANTGTYNCVKFWKGGPD-MELKSGPGTEL 505
Query: 141 ALGAKPSAPVVLGP 154
++ ++ S ++ P
Sbjct: 506 SVHSEYSVGLLRPP 519
Score = 57.0 bits (136), Expect = 2e-08
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 140 MALGAKPSAPVV--LGPAARTTPEHTVSFTCESHGFS----PRDITLKWFKNGNELSDFQ 193
+ LG P + GP+ RT+P +V F C + F+ RD + W K+ +E
Sbjct: 16 LLLGLTAGQPFISLTGPSHRTSPGDSVPFNCTAVPFNSQDFSRDFNVTWLKDSDEHPASA 75
Query: 194 TNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRGP 251
+ P + I S A V L DV S++ CEV H L +PL+ T NLS+A R P
Sbjct: 76 QRLVPDNGGNDF-ITSKAWVTLTRQDVSSEITCEVTHRAL-AEPLKTTMNLSQATRNP 131
Score = 54.7 bits (130), Expect = 9e-08
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 153 GPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRSTAR 212
GP R+ P + T S GFS +T+ W KN +EL + QT+V +G + Y++ S+
Sbjct: 190 GPLQRSEPGTRIRLTYASSGFSTHQVTVTWLKNKHELPNPQTSVQYSGHT--YNVTSSVL 247
Query: 213 VVLDPWDVRSQVICEVAH 230
V L DV S V+C V H
Sbjct: 248 VPLMDDDVFSHVVCHVEH 265
>gi|198386341 signal-regulatory protein beta 2 isoform 2 [Homo
sapiens]
Length = 244
Score = 95.9 bits (237), Expect = 3e-20
Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 31/173 (17%)
Query: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAG-------------------------EEELQMI 35
M P H P FLLL L+L ++ +G E +L +I
Sbjct: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGAGDPEPDLWII 64
Query: 36 QPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLT 95
QP++L+L T G T L+CTV P GP+ WF+G G RE IYN P+ T V
Sbjct: 65 QPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKETAV---- 120
Query: 96 KRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSA 148
+ +N DFSI + +++ D GTYYCVKF++ N ++ SG GT + + AK ++
Sbjct: 121 QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 171
>gi|171906611 signal-regulatory protein beta 2 isoform 1 [Homo
sapiens]
Length = 342
Score = 92.4 bits (228), Expect = 4e-19
Identities = 50/120 (41%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 29 EEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQKEGHFPRV 88
E +L +IQP++L+L T G T L+CTV P GP+ WF+G G RE IYN P+
Sbjct: 156 EPDLWIIQPQELVLGTTGDTVFLNCTVLGDGPPGPIRWFQGAGLSREAIYNFGGISHPKE 215
Query: 89 TTVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSA 148
T V + +N DFSI + +++ D GTYYCVKF++ N ++ SG GT + + AK ++
Sbjct: 216 TAV----QASNNDFSILLQNVSSEDAGTYYCVKFQR--KPNRQYLSGQGTSLKVKAKSTS 269
Score = 84.0 bits (206), Expect = 1e-16
Identities = 66/198 (33%), Positives = 93/198 (46%), Gaps = 21/198 (10%)
Query: 1 MPVPASWPHPPGPFLLLTLLLGLTEVAGEE---ELQMIQPEKLLLVTVGKTATLHCTVTS 57
M P H P FLLL L+L ++ +G+ + Q++QPE +LV G+T L C V
Sbjct: 5 MSAPTCLAHLPPCFLLLALVLVPSDASGQSSRNDWQVLQPEGPMLVAEGETLLLRCMVVG 64
Query: 58 LLPVGPVLWFRGVGPGRELIYNQKEGHFPRVTTVSDLTKRN-NMDFSIRISSITPADVGT 116
G + W + ++ IYN K G FP V + T N D+SI I ++T GT
Sbjct: 65 SCTDGMIKWVKVSTQDQQEIYNFKRGSFPGVMPMIQRTSEPLNCDYSIYIHNVTREHTGT 124
Query: 117 YYCVKFRKGSPENVEFKSGPGTEMAL-GAKPSAP---------VVLGPAARTTPEHTVSF 166
Y+CV+F G E+ E KS GT + + GA P +VLG T TV
Sbjct: 125 YHCVRF-DGLSEHSEMKSDEGTSVLVKGAGDPEPDLWIIQPQELVLG-----TTGDTVFL 178
Query: 167 TCESHGFSPRDITLKWFK 184
C G P ++WF+
Sbjct: 179 NCTVLGDGPPG-PIRWFQ 195
>gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens]
Length = 398
Score = 52.0 bits (123), Expect = 6e-07
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 101 DFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTP 160
+ SI IS++ AD G Y C F + ++ LG P P++ G +
Sbjct: 92 ELSISISNVALADEGEYTCSIF------TMPVRTAKSLVTVLGI-PQKPIITGYKSSLRE 144
Query: 161 EHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNV--DPTGQSVAYSIRSTARVVLDPW 218
+ T + C+S G P L W K EL T + DP G++ S T +V +
Sbjct: 145 KDTATLNCQSSGSKPA-ARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTRE-- 201
Query: 219 DVRSQVICEVAHVTLQGDPLRGTANLSEAIRGPASSL 255
D + ++C V H +L+G R T+ E + P + +
Sbjct: 202 DDGASIVCSVNHESLKGAD-RSTSQRIEVLYTPTAMI 237
>gi|11056046 cell adhesion molecule 3 isoform 1 [Homo sapiens]
Length = 432
Score = 52.0 bits (123), Expect = 6e-07
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Query: 101 DFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTP 160
+ SI IS++ AD G Y C F + ++ LG P P++ G +
Sbjct: 126 ELSISISNVALADEGEYTCSIF------TMPVRTAKSLVTVLGI-PQKPIITGYKSSLRE 178
Query: 161 EHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNV--DPTGQSVAYSIRSTARVVLDPW 218
+ T + C+S G P L W K EL T + DP G++ S T +V +
Sbjct: 179 KDTATLNCQSSGSKPA-ARLTWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTRE-- 235
Query: 219 DVRSQVICEVAHVTLQGDPLRGTANLSEAIRGPASSL 255
D + ++C V H +L+G R T+ E + P + +
Sbjct: 236 DDGASIVCSVNHESLKGAD-RSTSQRIEVLYTPTAMI 271
>gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens]
Length = 437
Score = 51.6 bits (122), Expect = 7e-07
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 8/145 (5%)
Query: 93 DLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSAPVVL 152
+L + + + SI +S ++ +D G Y C F + K+ LG P P +
Sbjct: 80 ELVRASWHELSISVSDVSLSDEGQYTCSLF------TMPVKTSKAYLTVLGV-PEKPQIS 132
Query: 153 GPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRSTAR 212
G ++ + TC++ G P ++WFKN E+ D + + +++ ST
Sbjct: 133 GFSSPVMEGDLMQLTCKTSGSKPA-ADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLD 191
Query: 213 VVLDPWDVRSQVICEVAHVTLQGDP 237
+D D VIC V H +L P
Sbjct: 192 FRVDRSDDGVAVICRVDHESLNATP 216
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 47.0 bits (110), Expect = 2e-05
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Query: 15 LLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFR---GVG 71
LL LLL L + GE + + Q L ++ G+ ATL C + + + W++ G+
Sbjct: 7 LLFLLLLWLPDTTGE--IVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLA 64
Query: 72 PGRELIYNQKEGHFPRVTTVSDLTKRNNM--DFSIRISSITPADVGTYYCVKFRKGSPEN 129
P R LIY+ R T + D + DF++ IS + P D YYC ++ P
Sbjct: 65 P-RLLIYDASS----RATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPTV 119
Query: 130 VEFKS 134
++ ++
Sbjct: 120 IQLET 124
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 47.0 bits (110), Expect = 2e-05
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Query: 15 LLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFR---GVG 71
LL LLL L + GE + + Q L ++ G+ ATL C + + + W++ G+
Sbjct: 7 LLFLLLLWLPDTTGE--IVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLA 64
Query: 72 PGRELIYNQKEGHFPRVTTVSDLTKRNNM--DFSIRISSITPADVGTYYCVKFRKGSPEN 129
P R LIY+ R T + D + DF++ IS + P D YYC ++ P
Sbjct: 65 P-RLLIYDASS----RATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPTV 119
Query: 130 VEFKS 134
++ ++
Sbjct: 120 IQLET 124
>gi|8393638 F11 receptor precursor [Homo sapiens]
Length = 299
Score = 46.6 bits (109), Expect = 2e-05
Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 10/169 (5%)
Query: 104 IRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHT 163
I S+T D GTY C+ +G E K ++ + PS P V P++ T
Sbjct: 94 ITFKSVTREDTGTYTCMVSEEGGNSYGEVK----VKLIVLVPPSKPTVNIPSSATIGNRA 149
Query: 164 VSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDV--R 221
V E G P + T WFK+G + + S +T +V DP
Sbjct: 150 VLTCSEQDGSPPSEYT--WFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDT 207
Query: 222 SQVICEVAHVTLQGDPLRGTANLSEAIRGPASSLTALLLIAVLLGPIYV 270
+ CE + G P+ A EA+ + A +L+ ++L I V
Sbjct: 208 GEYSCEARNG--YGTPMTSNAVRMEAVERNVGVIVAAVLVTLILLGILV 254
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 45.8 bits (107), Expect = 4e-05
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 24/116 (20%)
Query: 15 LLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGR 74
LL LLL L + GE + M Q L ++ G+ ATL C + + + W
Sbjct: 7 LLFLLLLWLPDTTGE--IVMTQSPATLSLSPGERATLSCRASQSVSSSYLSW-------- 56
Query: 75 ELIYNQKEGHFPRVTTVSDLTKRNNM-----------DFSIRISSITPADVGTYYC 119
Y QK G PR+ T+ + DF++ ISS+ P D YYC
Sbjct: 57 ---YQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTDFTLTISSLQPEDFAVYYC 109
>gi|239752604 PREDICTED: similar to immunoglobulin lambda-like
polypeptide 1 [Homo sapiens]
Length = 490
Score = 45.4 bits (106), Expect = 5e-05
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 7/131 (5%)
Query: 117 YYCVKFRKGSPENVEFKSGPGTEMALGAKPSAPVV--LGPAARTTPEHTVSFTCESHGFS 174
Y C KG P +E T +P P V L P+ ++ VS TC GF
Sbjct: 362 YKCKVSNKGLPAPIE-----KTISKTKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFY 416
Query: 175 PRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQ 234
P DI ++W NG ++++T ++ + S V W + C V H L
Sbjct: 417 PSDIAVEWESNGQPENNYKTTPPMLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 476
Query: 235 GDPLRGTANLS 245
+ + +LS
Sbjct: 477 NHYTQKSLSLS 487
Score = 33.1 bits (74), Expect = 0.27
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 138 TEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVD 197
T +A K + L P +R+T E T + C + P +T+ W +G S T
Sbjct: 161 TSLAASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSW-NSGALTSGVHTFPA 219
Query: 198 PTGQSVAYSIRSTARVVLDPWDVRSQVICEVAH 230
S YS+ S V + ++ C V H
Sbjct: 220 VLQSSGLYSLSSVVTVTSSNFGTQTYT-CNVDH 251
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 44.7 bits (104), Expect = 9e-05
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 22/117 (18%)
Query: 14 FLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPG 73
FLLL L G + E+ M Q L ++ G+ ATL C + + + W
Sbjct: 9 FLLLLWLPGEGNMRYHGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSW------- 61
Query: 74 RELIYNQKEGHFPRVTTVSDLTKRNNM-----------DFSIRISSITPADVGTYYC 119
Y QK G PR+ T+ + DF++ ISS+ P D YYC
Sbjct: 62 ----YQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTDFTLTISSLQPEDFAVYYC 114
>gi|4885123 CD80 antigen precursor [Homo sapiens]
Length = 288
Score = 42.7 bits (99), Expect = 3e-04
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 90 TVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSAP 149
T+ D+T NN+ SI I ++ P+D GTY CV + E FK E+ L K P
Sbjct: 91 TIFDIT--NNL--SIVILALRPSDEGTYECVVLKY---EKDAFKREHLAEVTLSVKADFP 143
Query: 150 VVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRS 209
+ C + G P L W +NG EL+ T V ++ Y++ S
Sbjct: 144 TPSISDFEIPTSNIRRIICSTSGGFPEP-HLSWLENGEELNAINTTVSQDPETELYAVSS 202
>gi|157739930 TAP binding protein-like [Homo sapiens]
Length = 468
Score = 42.7 bits (99), Expect = 3e-04
Identities = 51/252 (20%), Positives = 102/252 (40%), Gaps = 37/252 (14%)
Query: 31 ELQMIQPEKLLLVTVGKTATLHCTVT-----SLLPVGPVLWFRGVGPGRELIYNQKEGHF 85
E Q++ + L +G +A+L C + L+ V L +G G +L+Y+ G
Sbjct: 190 EFQVMTQTQSLSFLLGSSASLDCGFSMAPGLDLISVEWRLQHKGRG---QLVYSWTAGQG 246
Query: 86 PRV---TTVSDLTKRNNMDFSIRISSITPADVGTYYCV----KFRKGSPENVEFKSGPGT 138
V T+ D S+ + +T D GTY C +R + ++ P
Sbjct: 247 QAVRKGATLEPAQLGMARDASLTLPGLTIQDEGTYICQITTSLYRAQQIIQLNIQASPKV 306
Query: 139 EMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKN---GNELSDFQTN 195
++L + P ++ C+ G+ P D+ + W + G+ +
Sbjct: 307 RLSLANEALLPTLI---------------CDIAGYYPLDVVVTWTREELGGSPAQVSGAS 351
Query: 196 VDPTGQSVAYSIRSTARVVLDPWDVRSQVICEVAHVTLQGDPLRGTANLSEAIRGPASSL 255
QSVA + ++ + +P + C+V H++L+ +PL + + R A +
Sbjct: 352 FSSLRQSVAGTYSISSSLTAEPGSAGATYTCQVTHISLE-EPLGASTQVVPPERRTALGV 410
Query: 256 ---TALLLIAVL 264
++L L+A++
Sbjct: 411 IFASSLFLLALM 422
>gi|32699028 V-set and immunoglobulin domain containing 1 [Homo
sapiens]
Length = 387
Score = 42.4 bits (98), Expect = 4e-04
Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 18/194 (9%)
Query: 14 FLLLTLLLGLTEVAGEEELQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVL-----WFR 68
FL+L+ L G V +Q+ P+ + VTVG TL C T+ + L +F
Sbjct: 9 FLILSCLAGQVSV-----VQVTIPDGFVNVTVGSNVTLICIYTTTVASREQLSIQWSFFH 63
Query: 69 GVGPGRELIYNQKEGHFPRVTTVSDLTKRNNM--DFSIRISSITPADVGTYYCVKFRKGS 126
IY + G + D +N + SI IS + PAD G Y C +
Sbjct: 64 KKEMEPISIYFSQGGQAVAIGQFKDRITGSNDPGNASITISHMQPADSGIYIC---DVNN 120
Query: 127 PENVEFKSGPGTEMALGAKPSAPVVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFK-N 185
P + ++ +++ KPS P + R HT+S +C S +P + W K
Sbjct: 121 PPDFLGQNQGILNVSVLVKPSKP-LCSVQGRPETGHTISLSCLSALGTPSPV-YYWHKLE 178
Query: 186 GNELSDFQTNVDPT 199
G ++ + N +PT
Sbjct: 179 GRDIVPVKENFNPT 192
>gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo
sapiens]
Length = 162
Score = 42.0 bits (97), Expect = 6e-04
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 23/99 (23%)
Query: 32 LQMIQPEKLLLVTVGKTATLHCTVTSLLPVGPVLWFRGVGPGRELIYNQKEGHFPR--VT 89
+QM QP L +VG + T+ C + + W Y QK G P+ +
Sbjct: 74 IQMTQPPSSLSASVGDSVTITCRASQSF-TNQLAW-----------YQQKPGKAPKLLIY 121
Query: 90 TVSDLT---------KRNNMDFSIRISSITPADVGTYYC 119
VS L + DF++ ISS+ P DV TYYC
Sbjct: 122 RVSSLQTGVPSLFSGSESGTDFTLTISSLQPDDVATYYC 160
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,223,471
Number of Sequences: 37866
Number of extensions: 583604
Number of successful extensions: 2224
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 1867
Number of HSP's gapped (non-prelim): 461
length of query: 276
length of database: 18,247,518
effective HSP length: 101
effective length of query: 175
effective length of database: 14,423,052
effective search space: 2524034100
effective search space used: 2524034100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.