Guide to the Human Genome
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Name: LOC100291682 Sequence: fasta or formatted (152aa) NCBI GI: 239753212
Description:

PREDICTED: similar to hCG1686089

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         13           3
 C cysteine            1.3          2           1
 D aspartate           3.3          5           1
 E glutamate           3.9          6           1
 F phenylalanine       3.9          6           1
 G glycine             5.9          9           1
 H histidine           0.0          0           0
 I isoleucine          3.9          6           1
 K lysine              1.3          2           1
 L leucine            15.1         23           4
 M methionine          1.3          2           1
 N asparagine          0.0          0           0
 P proline             7.9         12           2
 Q glutamine           7.2         11           2
 R arginine            4.6          7           1
 S serine             12.5         19           3
 T threonine          10.5         16           2
 V valine              2.6          4           1
 W tryptophan          1.3          2           1
 Y tyrosine            4.6          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1686089 
LOC100290992          1.000   PREDICTED: hypothetical protein XP_002347049 
LOC440871             0.816   PREDICTED: similar to hCG2043206 
LOC100291786          0.780   PREDICTED: similar to hCG2043206 
LOC650405             0.531   PREDICTED: similar to hCG2042707 
LOC652493             0.509   PREDICTED: similar to pre-B lymphocyte gene 1 [Homo...
LOC100130100          0.462   PREDICTED: similar to hCG26659 
LOC100291464          0.462   PREDICTED: hypothetical protein XP_002346449 
LOC100130100          0.462   PREDICTED: similar to hCG26659 
LOC642424             0.462   PREDICTED: similar to hCG1742442 
LOC642424             0.462   PREDICTED: similar to hCG1742442 
LOC642424             0.462   PREDICTED: similar to hCG1742442 
LOC100287723          0.458   PREDICTED: hypothetical protein XP_002342271 
LOC642838             0.451   PREDICTED: similar to hCG1742442 
LOC439957             0.433   PREDICTED: similar to hCG1742442 
LOC439957             0.433   PREDICTED: similar to hCG1742442 
LOC100132426          0.430   PREDICTED: similar to hCG1742442 
LOC100288993          0.430   PREDICTED: hypothetical protein XP_002342967 
LOC100291731          0.368   PREDICTED: similar to hCG36857 
LOC100290819          0.368   PREDICTED: hypothetical protein XP_002348319 
LOC100291027          0.325   PREDICTED: hypothetical protein XP_002348323 
LOC100293277          0.292   PREDICTED: similar to hCG2040021 
LOC100293440          0.278   PREDICTED: similar to Ig lambda chain 
LOC100290481          0.271   PREDICTED: hypothetical protein XP_002348153 
LOC100128009          0.271   PREDICTED: hypothetical protein 
LOC100128009          0.271   PREDICTED: hypothetical protein 
LOC100128009          0.271   PREDICTED: hypothetical protein 
LOC100293142          0.260   PREDICTED: similar to hCG2040019 
LOC651536             0.162   PREDICTED: similar to hCG96018 
LOC651536             0.162   PREDICTED: similar to hCG96018 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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