Guide to the Human Genome
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Name: GPER Sequence: fasta or formatted (375aa) NCBI GI: 91106714
Description:

G protein-coupled receptor 30

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt mRNA [375aa] G protein-coupled receptor 30
alt mRNA [375aa] G protein-coupled receptor 30
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         33           2
 C cysteine            2.9         11           1
 D aspartate           2.9         11           1
 E glutamate           3.7         14           1
 F phenylalanine       7.2         27           2
 G glycine             4.3         16           1
 H histidine           3.7         14           2
 I isoleucine          6.1         23           2
 K lysine              1.9          7           1
 L leucine            13.6         51           2
 M methionine          2.4          9           1
 N asparagine          3.7         14           1
 P proline             4.5         17           1
 Q glutamine           3.5         13           2
 R arginine            6.1         23           2
 S serine              6.7         25           2
 T threonine           5.3         20           2
 V valine              8.5         32           2
 W tryptophan          1.1          4           1
 Y tyrosine            2.9         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 30 
GPER                  1.000   G protein-coupled receptor 30 
GPER                  1.000   G protein-coupled receptor 30 
CCR8                  0.159   chemokine (C-C motif) receptor 8 
IL8RA                 0.157   interleukin 8 receptor alpha 
IL8RB                 0.150   interleukin 8 receptor beta 
CX3CR1                0.150   chemokine (C-X3-C motif) receptor 1 
SSTR4                 0.147   somatostatin receptor 4 
CYSLTR2               0.147   cysteinyl leukotriene receptor 2 
CCR1                  0.143   chemokine (C-C motif) receptor 1 
AGTR1                 0.141   angiotensin II receptor, type 1 
AGTR1                 0.141   angiotensin II receptor, type 1 
AGTR1                 0.141   angiotensin II receptor, type 1 
AGTR1                 0.141   angiotensin II receptor, type 1 
AGTR1                 0.141   angiotensin II receptor, type 1 
CCR4                  0.135   chemokine (C-C motif) receptor 4 
CCR3                  0.133   CC chemokine receptor 3 
CCR3                  0.133   CC chemokine receptor 3 
CXCR7                 0.132   chemokine orphan receptor 1 
CCR5                  0.130   chemokine (C-C motif) receptor 5 
CCR5                  0.130   chemokine (C-C motif) receptor 5 
CCR9                  0.129   chemokine (C-C motif) receptor 9 isoform B 
CCR9                  0.129   chemokine (C-C motif) receptor 9 isoform A 
CXCR5                 0.129   Burkitt lymphoma receptor 1 isoform 1 
CXCR5                 0.129   Burkitt lymphoma receptor 1 isoform 2 
LPAR6                 0.128   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.128   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.128   G-protein coupled purinergic receptor P2Y5 
CCR2                  0.126   chemokine (C-C motif) receptor 2 isoform B 
GPR183                0.126   EBV-induced G protein-coupled receptor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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