Guide to the Human Genome
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Name: CXCR7 Sequence: fasta or formatted (362aa) NCBI GI: 31083344
Description:

chemokine orphan receptor 1

Referenced in:

Chemokines and Their Receptors
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         18           1
 C cysteine            3.9         14           2
 D aspartate           3.3         12           1
 E glutamate           3.3         12           1
 F phenylalanine       6.6         24           2
 G glycine             2.2          8           1
 H histidine           3.0         11           1
 I isoleucine          8.0         29           2
 K lysine              3.9         14           2
 L leucine            11.0         40           2
 M methionine          2.5          9           1
 N asparagine          4.1         15           2
 P proline             3.6         13           1
 Q glutamine           1.7          6           1
 R arginine            3.0         11           2
 S serine              9.9         36           2
 T threonine           6.4         23           2
 V valine             10.8         39           3
 W tryptophan          2.2          8           1
 Y tyrosine            5.5         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chemokine orphan receptor 1 
GPR182                0.248   G protein-coupled receptor 182 
IL8RB                 0.220   interleukin 8 receptor beta 
AGTR1                 0.218   angiotensin II receptor, type 1 
AGTR1                 0.218   angiotensin II receptor, type 1 
AGTR1                 0.218   angiotensin II receptor, type 1 
AGTR1                 0.218   angiotensin II receptor, type 1 
AGTR1                 0.218   angiotensin II receptor, type 1 
CXCR4                 0.214   chemokine (C-X-C motif) receptor 4 isoform b 
CXCR4                 0.214   chemokine (C-X-C motif) receptor 4 isoform a 
IL8RA                 0.214   interleukin 8 receptor alpha 
CCR1                  0.199   chemokine (C-C motif) receptor 1 
CX3CR1                0.199   chemokine (C-X3-C motif) receptor 1 
CCRL1                 0.196   chemokine (C-C motif) receptor-like 1 
CCRL1                 0.196   chemokine (C-C motif) receptor-like 1 
CCR7                  0.196   chemokine (C-C motif) receptor 7 precursor 
CXCR3                 0.194   chemokine (C-X-C motif) receptor 3 isoform B 
CXCR3                 0.194   chemokine (C-X-C motif) receptor 3 isoform A 
CCR4                  0.194   chemokine (C-C motif) receptor 4 
SSTR1                 0.190   somatostatin receptor 1 
AGTR2                 0.189   angiotensin II receptor, type 2 
CCR8                  0.189   chemokine (C-C motif) receptor 8 
CCR5                  0.187   chemokine (C-C motif) receptor 5 
CCR5                  0.187   chemokine (C-C motif) receptor 5 
CCR3                  0.185   CC chemokine receptor 3 
CCR3                  0.185   CC chemokine receptor 3 
CCR2                  0.182   chemokine (C-C motif) receptor 2 isoform B 
LPAR6                 0.182   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.182   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.182   G-protein coupled purinergic receptor P2Y5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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