Guide to the Human Genome
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Name: ARHGAP11B Sequence: fasta or formatted (267aa) NCBI GI: 89886350
Description:

Rho GTPase activating protein 11B

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         19           2
 C cysteine            2.2          6           1
 D aspartate           3.4          9           1
 E glutamate           6.7         18           2
 F phenylalanine       4.1         11           2
 G glycine             5.6         15           2
 H histidine           4.9         13           2
 I isoleucine          4.1         11           1
 K lysine              7.9         21           2
 L leucine            14.2         38           3
 M methionine          1.9          5           1
 N asparagine          4.5         12           1
 P proline             4.1         11           2
 Q glutamine           3.4          9           2
 R arginine            5.6         15           3
 S serine              6.7         18           2
 T threonine           3.0          8           1
 V valine              7.1         19           1
 W tryptophan          1.5          4           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho GTPase activating protein 11B 
ARHGAP11A             0.799   Rho GTPase activating protein 11A isoform 1 
ARHGAP11A             0.799   Rho GTPase activating protein 11A isoform 2 
SRGAP2                0.122   SLIT-ROBO Rho GTPase activating protein 2 isoform a...
SRGAP2                0.122   SLIT-ROBO Rho GTPase activating protein 2 isoform b...
GMIP                  0.114   GEM interacting protein 
ARHGAP4               0.114   Rho GTPase activating protein 4 
ARHGAP22              0.114   Rho GTPase activating protein 2 
ARHGAP6               0.106   Rho GTPase activating protein 6 isoform 4 
ARHGAP6               0.106   Rho GTPase activating protein 6 isoform 3 
ARHGAP6               0.106   Rho GTPase activating protein 6 isoform 1 
SRGAP1                0.106   SLIT-ROBO Rho GTPase activating protein 1 
DLC1                  0.104   deleted in liver cancer 1 isoform 1 
DLC1                  0.104   deleted in liver cancer 1 isoform 2 
SRGAP3                0.104   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
ARHGAP1               0.103   Rho GTPase activating protein 1 
RICH2                 0.103   Rho GTPase-activating protein RICH2 
SRGAP3                0.099   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
LOC553158             0.095   PRR5-ARHGAP8 fusion protein 
ARHGAP8               0.095   Rho GTPase activating protein 8 isoform 2 
ARHGAP8               0.095   Rho GTPase activating protein 8 isoform 1 
ARHGAP18              0.095   Rho GTPase activating protein 18 
ARHGAP24              0.093   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.093   Rho GTPase activating protein 24 isoform 1 
ARHGAP17              0.091   nadrin isoform 1 
ARHGAP17              0.091   nadrin isoform 2 
C20orf95              0.091   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.091   PREDICTED: chromosome 20 open reading frame 95 [Hom...
C20orf95              0.091   PREDICTED: Rho GTPase-activating protein 18-like [H...
ARHGAP20              0.091   Rho GTPase activating protein 20 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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