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Search of human proteins with 89363026
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89363026 calponin-homology and microtubule-associated
protein [Homo sapiens]
(236 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89363026 calponin-homology and microtubule-associated protein... 470 e-133
gi|31543825 spermatogenesis associated 4 [Homo sapiens] 68 8e-12
gi|21264353 SWI/SNF related, matrix associated, actin dependent ... 35 0.056
gi|51477704 SWI/SNF related, matrix associated, actin dependent ... 35 0.056
gi|51477702 SWI/SNF related, matrix associated, actin dependent ... 34 0.096
gi|110825988 TAR RNA binding protein 1 [Homo sapiens] 34 0.13
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 33 0.28
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 33 0.28
gi|91208420 bassoon protein [Homo sapiens] 33 0.28
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 33 0.28
gi|7662176 ProSAPiP1 protein [Homo sapiens] 32 0.36
gi|81295809 pericentrin [Homo sapiens] 32 0.48
gi|21735548 centrosomal protein 2 [Homo sapiens] 32 0.62
gi|71061468 centromere protein E [Homo sapiens] 32 0.62
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 31 0.81
gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens] 31 0.81
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens] 31 0.81
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ... 31 0.81
gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens] 31 0.81
gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens] 30 1.4
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 30 1.4
gi|224465235 euchromatic histone-lysine N-methyltransferase 1 is... 30 1.4
gi|224465233 euchromatic histone-lysine N-methyltransferase 1 is... 30 1.4
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 30 1.4
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 30 1.4
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 30 1.4
gi|5729838 glioma-amplified sequence-41 [Homo sapiens] 30 1.4
gi|83776598 virus-induced signaling adapter [Homo sapiens] 30 1.8
gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens] 30 1.8
gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens] 30 1.8
>gi|89363026 calponin-homology and microtubule-associated protein
[Homo sapiens]
Length = 236
Score = 470 bits (1210), Expect = e-133
Identities = 236/236 (100%), Positives = 236/236 (100%)
Query: 1 MASSVDEEALHQLYLWVDNIPLSRPKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYVPAN 60
MASSVDEEALHQLYLWVDNIPLSRPKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYVPAN
Sbjct: 1 MASSVDEEALHQLYLWVDNIPLSRPKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYVPAN 60
Query: 61 SLQQKLSNWGHLNRKVLKRLNFSVPDDVMRKIAQCAPGVVELVLIPLRQRLEERQRRRKQ 120
SLQQKLSNWGHLNRKVLKRLNFSVPDDVMRKIAQCAPGVVELVLIPLRQRLEERQRRRKQ
Sbjct: 61 SLQQKLSNWGHLNRKVLKRLNFSVPDDVMRKIAQCAPGVVELVLIPLRQRLEERQRRRKQ 120
Query: 121 GAGSLQELAPQDGSGYMDVGVSQKARGEGVPDPQGGGQLSWDRPPAPRPPAYNRALQGDP 180
GAGSLQELAPQDGSGYMDVGVSQKARGEGVPDPQGGGQLSWDRPPAPRPPAYNRALQGDP
Sbjct: 121 GAGSLQELAPQDGSGYMDVGVSQKARGEGVPDPQGGGQLSWDRPPAPRPPAYNRALQGDP 180
Query: 181 SFVLQIAEKEQELLASQETVQVLQMKVRRLEHLLQLKNVRIEDLSRRLQQAERKQR 236
SFVLQIAEKEQELLASQETVQVLQMKVRRLEHLLQLKNVRIEDLSRRLQQAERKQR
Sbjct: 181 SFVLQIAEKEQELLASQETVQVLQMKVRRLEHLLQLKNVRIEDLSRRLQQAERKQR 236
>gi|31543825 spermatogenesis associated 4 [Homo sapiens]
Length = 305
Score = 67.8 bits (164), Expect = 8e-12
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 16 WVDNIPLSRPKRNLSRDFSDGVLVAEVIKFYFPKMVEMHNYVPANSLQQKLSNWGHLNRK 75
W+ + LS RN++RDFS+G L+AE+ Y+P +E+ ++ SL+ KL NW L K
Sbjct: 58 WLQGLDLSFFPRNINRDFSNGFLIAEIFCIYYPWELELSSFENGTSLKVKLDNWAQL-EK 116
Query: 76 VLKRLNFSVPDDVMRKIAQCAPGVVELVLIPLRQRLEERQ 115
L R F +P +++ C GV E+++ + L R+
Sbjct: 117 FLARKKFKLPKELIHGTIHCKAGVPEILIEEVYTLLTHRE 156
>gi|21264353 SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3 isoform 1
[Homo sapiens]
Length = 470
Score = 35.0 bits (79), Expect = 0.056
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 5/144 (3%)
Query: 97 PGVVELVLIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVS----QKARGEGVPD 152
PG+ + R + R QGA +P GS + G++ + AR P
Sbjct: 3 PGLQHPPTVVQRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAAPP 62
Query: 153 PQGGGQLSWDRPPAPRPPAYNRALQGDPSFVLQIAEKEQELLASQETVQVLQMKVRRLEH 212
P G Q P P PA +R+ + + ++ +EL+ + L R+L+
Sbjct: 63 P-GQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQ 121
Query: 213 LLQLKNVRIEDLSRRLQQAERKQR 236
+ K V I++ +R + +RK R
Sbjct: 122 TIMRKRVDIQEALKRPMKQKRKLR 145
>gi|51477704 SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3 isoform 1
[Homo sapiens]
Length = 470
Score = 35.0 bits (79), Expect = 0.056
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 5/144 (3%)
Query: 97 PGVVELVLIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVS----QKARGEGVPD 152
PG+ + R + R QGA +P GS + G++ + AR P
Sbjct: 3 PGLQHPPTVVQRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAAPP 62
Query: 153 PQGGGQLSWDRPPAPRPPAYNRALQGDPSFVLQIAEKEQELLASQETVQVLQMKVRRLEH 212
P G Q P P PA +R+ + + ++ +EL+ + L R+L+
Sbjct: 63 P-GQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQ 121
Query: 213 LLQLKNVRIEDLSRRLQQAERKQR 236
+ K V I++ +R + +RK R
Sbjct: 122 TIMRKRVDIQEALKRPMKQKRKLR 145
>gi|51477702 SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3 isoform 2
[Homo sapiens]
Length = 483
Score = 34.3 bits (77), Expect = 0.096
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Query: 101 ELVLIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVS----QKARGEGVPDPQGG 156
E ++ +R + R QGA +P GS + G++ + AR P P G
Sbjct: 20 EFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAAPPP-GQ 78
Query: 157 GQLSWDRPPAPRPPAYNRALQGDPSFVLQIAEKEQELLASQETVQVLQMKVRRLEHLLQL 216
Q P P PA +R+ + + ++ +EL+ + L R+L+ +
Sbjct: 79 SQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMR 138
Query: 217 KNVRIEDLSRRLQQAERKQR 236
K V I++ +R + +RK R
Sbjct: 139 KRVDIQEALKRPMKQKRKLR 158
>gi|110825988 TAR RNA binding protein 1 [Homo sapiens]
Length = 1621
Score = 33.9 bits (76), Expect = 0.13
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 107 LRQRLEERQRRRKQGAGSLQELAPQDGSGYM-DVGVSQKARGEGVPDP 153
L QRLE+ + R GAG+L E A + +GY+ + S + R G PDP
Sbjct: 39 LLQRLEDEEARGSGGAGALPEAAREVAAGYLVPLLRSLRGRPAGGPDP 86
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 32.7 bits (73), Expect = 0.28
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 97 PGVVELVLIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVS-QKARGEG------ 149
PG+ + +Q+ +++Q++++Q Q PQ V+ + G G
Sbjct: 213 PGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGP 272
Query: 150 -----VPDPQGGGQLSWDRPPAPRPPA-------YNRALQGDPSFVLQIAEKEQELLASQ 197
+P P GG+ S P A +PPA + G PS VLQ+ +K+ + Q
Sbjct: 273 STPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQ 332
Query: 198 -----ETVQVLQMKVRRLEHLLQLKNVRIEDL 224
+ V++LQ + RL+ + + +E+L
Sbjct: 333 KPQGLDPVEILQEREYRLQARIAHRIQELENL 364
Score = 29.6 bits (65), Expect = 2.4
Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 24/137 (17%)
Query: 121 GAGSLQELAPQDGSGYMDVGVSQKARGEGVPDPQGGGQLSWDRPPAPRPPAYNRALQGDP 180
G G Q Q GYM S E V P GG PP P + GDP
Sbjct: 105 GMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGG---GPTPPQMPPSQPGALIPGDP 161
Query: 181 SFV------------LQIAEKEQELLASQ---------ETVQVLQMKVRRLEHLLQLKNV 219
+ +Q+ + ++LA + ET+Q+ R L L Q +
Sbjct: 162 QAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQ 221
Query: 220 RIEDLSRRLQQAERKQR 236
+ + ++ QQ +++Q+
Sbjct: 222 QQQQQQQQQQQQQQQQQ 238
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 32.7 bits (73), Expect = 0.28
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 97 PGVVELVLIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVS-QKARGEG------ 149
PG+ + +Q+ +++Q++++Q Q PQ V+ + G G
Sbjct: 213 PGLQQQQQQQQQQQQQQQQQQQQQQQPQQQPPQPQTQQQQQPALVNYNRPSGPGPELSGP 272
Query: 150 -----VPDPQGGGQLSWDRPPAPRPPA-------YNRALQGDPSFVLQIAEKEQELLASQ 197
+P P GG+ S P A +PPA + G PS VLQ+ +K+ + Q
Sbjct: 273 STPQKLPVPAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQ 332
Query: 198 -----ETVQVLQMKVRRLEHLLQLKNVRIEDL 224
+ V++LQ + RL+ + + +E+L
Sbjct: 333 KPQGLDPVEILQEREYRLQARIAHRIQELENL 364
Score = 29.6 bits (65), Expect = 2.4
Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 24/137 (17%)
Query: 121 GAGSLQELAPQDGSGYMDVGVSQKARGEGVPDPQGGGQLSWDRPPAPRPPAYNRALQGDP 180
G G Q Q GYM S E V P GG PP P + GDP
Sbjct: 105 GMGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGG---GPTPPQMPPSQPGALIPGDP 161
Query: 181 SFV------------LQIAEKEQELLASQ---------ETVQVLQMKVRRLEHLLQLKNV 219
+ +Q+ + ++LA + ET+Q+ R L L Q +
Sbjct: 162 QAMSQPNRGPSPFSPVQLHQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGLQQQQQQ 221
Query: 220 RIEDLSRRLQQAERKQR 236
+ + ++ QQ +++Q+
Sbjct: 222 QQQQQQQQQQQQQQQQQ 238
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 32.7 bits (73), Expect = 0.28
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 143 QKARGEGVPDPQGGGQLSWDRPPAPRPPAYNRALQGDPSFVLQIAEKEQELLASQETVQV 202
++A G P P G +PPA P P F + A +E+ QE Q+
Sbjct: 2320 KEAAGAPAPAPLAG-----QKPPADAAPGGGSGALSRPGFEKEEASQEERQRKQQE--QL 2372
Query: 203 LQMKVRRLEHLLQLKNVRI-EDLSRRLQQAER 233
LQ++ R+E L +L+ +R+ E+L R + +R
Sbjct: 2373 LQLERERVE-LEKLRQLRLQEELERERVELQR 2403
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 32.7 bits (73), Expect = 0.28
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 101 ELVLIPLRQRLEERQRRRKQGAGSLQELAPQD------GSGYMDVGVSQKARGEGVPDPQ 154
E ++I R+ E+ +R+R++ + + P++ G G M++G + G+ P
Sbjct: 576 EEMMIRQREMEEQMRRQREESYSRMGYMDPRERDMRMGGGGAMNMGDPYGSGGQKFPPLG 635
Query: 155 GGGQLSWDRPPAPRPPAYNRALQG 178
GGG + ++ P P + ++ G
Sbjct: 636 GGGGIGYEANPGVPPATMSGSMMG 659
>gi|7662176 ProSAPiP1 protein [Homo sapiens]
Length = 673
Score = 32.3 bits (72), Expect = 0.36
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 42/132 (31%)
Query: 133 GSGYMDVGVSQKAR-------------------GEGVPDPQGGGQLSWDRPPAPRPPAYN 173
GSGY D+G S R GEG GGG L + P P A
Sbjct: 267 GSGYQDLGTSDSGRASSKSGSSSSMGRPGHLGSGEG-----GGGGLPFAACSPPSPSALI 321
Query: 174 RALQGDPSFVLQIAEKEQELLASQETV--------QVLQMK----VRRLEHLLQLKNVRI 221
+ L+ ++ EKEQE+ A + ++ QVL+ + R L L Q + ++
Sbjct: 322 QELEE------RLWEKEQEVAALRRSLEQSEAAVAQVLEERQKAWERELAELRQGCSGKL 375
Query: 222 EDLSRRLQQAER 233
+ ++RR Q+A++
Sbjct: 376 QQVARRAQRAQQ 387
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 32.0 bits (71), Expect = 0.48
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 109 QRLEERQRR-RKQGAGSLQELAPQDGSGYMDVGVSQKARGEGVPDPQGGG---QLSWDRP 164
+ L+E Q+R +K+ A +++L ++ + E V D Q G +L +
Sbjct: 1722 ENLQENQKRLQKEKAEEIEQLHEVIEKLQHELSLMGPVVHE-VSDSQAGSLQSELLCSQA 1780
Query: 165 PAPRPPAYNRALQGDPSFVLQIAEKEQELLASQE-----TVQVLQMKVR----------- 208
PR +ALQG+ L+ E LLA QE ++ LQ +++
Sbjct: 1781 GGPR----GQALQGELEAALEAKEALSRLLADQERRHSQALEALQQRLQGAEEAAELQLA 1836
Query: 209 RLEHLLQLKNVRIEDLSRRLQQAE 232
LE + L+ +ED++ R+Q+ E
Sbjct: 1837 ELERNVALREAEVEDMASRIQEFE 1860
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 31.6 bits (70), Expect = 0.62
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 20/143 (13%)
Query: 101 ELVLIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVSQKARGEGVPDPQGGGQLS 160
E L+ L+Q+ E+ + + +LQ+ ++ K R + + + Q S
Sbjct: 1900 EKALLALQQQCAEQAQEHEVETRALQD-------SWLQAQAVLKERDQELEALRAESQSS 1952
Query: 161 WDRPPAPRPPAY---------NRALQGDPSFVLQIAEKEQELLASQETVQ----VLQMKV 207
+ A R A + ALQG +L+ AE + L AS T+Q Q
Sbjct: 1953 RHQEEAARARAEALQEALGKAHAALQGKEQHLLEQAELSRSLEASTATLQASLDACQAHS 2012
Query: 208 RRLEHLLQLKNVRIEDLSRRLQQ 230
R+LE L+++ I+D R Q+
Sbjct: 2013 RQLEEALRIQEGEIQDQDLRYQE 2035
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 31.6 bits (70), Expect = 0.62
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 185 QIAEKEQELLASQETVQVLQMKVRRLEHL---LQLKNVRIEDL-SRRLQQAER 233
Q+ EK+Q+LL QE + +Q K+ +E+L L+ K + +E + + RL+ A++
Sbjct: 1135 QLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQK 1187
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 31.2 bits (69), Expect = 0.81
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 188 EKEQELLASQETVQVLQMKVRRLEHLLQLKNVRIEDLSRRLQQAER 233
EKE+++ +E + + K+RRLE ++ K +I +L ++ + E+
Sbjct: 346 EKEEKMRRQEEMMWEKEEKMRRLEEMMWEKEEKIRELEEKMHEQEK 391
>gi|169171269 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 632
Score = 31.2 bits (69), Expect = 0.81
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 104 LIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVSQ--KARGEGVPDPQGGGQLSW 161
L+ L + R+RRR++G P+ G G S+ A+G PD G G
Sbjct: 116 LLDLFENGNYRRRRRRRGPKREGPRGPRAGGAQGPSGPSELPAAQGRLAPDSAGEGAPGR 175
Query: 162 DRPPAPRPP 170
+ P +P PP
Sbjct: 176 EPPASPAPP 184
>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 528
Score = 31.2 bits (69), Expect = 0.81
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 104 LIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVSQ--KARGEGVPDPQGGGQLSW 161
L+ L + R+RRR++G P+ G G S+ A+G PD G G
Sbjct: 411 LLDLFENGNYRRRRRRRGPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAPGR 470
Query: 162 DRPPAPRPP 170
+ P +P PP
Sbjct: 471 EPPASPAPP 479
>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
sapiens]
Length = 591
Score = 31.2 bits (69), Expect = 0.81
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 104 LIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVSQ--KARGEGVPDPQGGGQLSW 161
L+ L + R+RRR++G P+ G G S+ A+G PD G G
Sbjct: 474 LLDLFENGNYRRRRRRRGPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAPGR 533
Query: 162 DRPPAPRPP 170
+ P +P PP
Sbjct: 534 EPPASPAPP 542
>gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 387
Score = 31.2 bits (69), Expect = 0.81
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 104 LIPLRQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVSQ--KARGEGVPDPQGGGQLSW 161
L+ L + R+RRR++G P+ G G S+ A+G PD G G
Sbjct: 178 LLDLFENGNYRRRRRRRGPKREGPRGPRAGGAQGPSGPSEPPAAQGRLAPDSAGEGAPGR 237
Query: 162 DRPPAPRPP 170
+ P +P PP
Sbjct: 238 EPPASPAPP 246
>gi|38348336 inter-alpha (globulin) inhibitor H5-like [Homo sapiens]
Length = 1313
Score = 30.4 bits (67), Expect = 1.4
Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 97 PGVVELVLIPLRQRLEERQRRRKQGAGSLQELA-------PQDGSGYMDVGVSQKARGEG 149
P + L+L+P L + SL A +DGS D + G G
Sbjct: 994 PEAISLLLLPEELELLSESMVESKFVESLNPPAFYTFLTPDEDGSPNWDGNSEEILGGAG 1053
Query: 150 VPDPQGGGQLSWDRPPAPRPPAYNRALQGDPSFVLQIAEKEQEL 193
G + + P ++ ++ GDP FV+QI E+++
Sbjct: 1054 GSMESQGSSVGLAKGTLPSIFTFSSSVDGDPHFVIQIPHSEEKI 1097
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 30.4 bits (67), Expect = 1.4
Identities = 34/171 (19%), Positives = 63/171 (36%), Gaps = 19/171 (11%)
Query: 63 QQKLSNWGHLNRKVLKRLNFSVPDDVMRKIAQCAPGVVELVLIPLRQRLEERQRRRKQGA 122
++K+ G +RK + + ++ + G +E + +RQ+ R+R+R A
Sbjct: 1330 EEKMFGRGSRHRKEVDYSDSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDA 1389
Query: 123 GSLQELAPQDGSGYMDVGVSQKARGEGVPDPQGGGQLSWDRPPA----PRPPAYNRALQG 178
GS D QK RG RPPA P PP + ++
Sbjct: 1390 GSSTPTTSTRSRDKDDESKKQKKRG---------------RPPAEKLSPNPPNLTKKMKK 1434
Query: 179 DPSFVLQIAEKEQELLASQETVQVLQMKVRRLEHLLQLKNVRIEDLSRRLQ 229
V++ + S+ +Q+ K + L K V + + R++
Sbjct: 1435 IVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIR 1485
>gi|224465235 euchromatic histone-lysine N-methyltransferase 1
isoform 2 [Homo sapiens]
Length = 808
Score = 30.4 bits (67), Expect = 1.4
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 119 KQGAGSLQELAPQDGSGYMDVGV-SQKARGEGVPDPQGGG 157
K AGS ++ AP D +GYM+V + S R +G+ Q G
Sbjct: 462 KSSAGSAEQTAPGDSTGYMEVSLDSLDLRVKGILSSQAEG 501
>gi|224465233 euchromatic histone-lysine N-methyltransferase 1
isoform 1 [Homo sapiens]
Length = 1298
Score = 30.4 bits (67), Expect = 1.4
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 119 KQGAGSLQELAPQDGSGYMDVGV-SQKARGEGVPDPQGGG 157
K AGS ++ AP D +GYM+V + S R +G+ Q G
Sbjct: 462 KSSAGSAEQTAPGDSTGYMEVSLDSLDLRVKGILSSQAEG 501
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 30.4 bits (67), Expect = 1.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 38 LVAEVIKFYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLKR 79
++A V K V H+ +PANS + WG NRK +R
Sbjct: 837 VMAPVSSTRLSKQVLPHDSLPANSQPSRRGRWGRKNRKTQER 878
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 30.4 bits (67), Expect = 1.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 38 LVAEVIKFYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLKR 79
++A V K V H+ +PANS + WG NRK +R
Sbjct: 837 VMAPVSSTRLSKQVLPHDSLPANSQPSRRGRWGRKNRKTQER 878
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 30.4 bits (67), Expect = 1.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 38 LVAEVIKFYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLKR 79
++A V K V H+ +PANS + WG NRK +R
Sbjct: 837 VMAPVSSTRLSKQVLPHDSLPANSQPSRRGRWGRKNRKTQER 878
>gi|5729838 glioma-amplified sequence-41 [Homo sapiens]
Length = 227
Score = 30.4 bits (67), Expect = 1.4
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 185 QIAEKEQELLASQETVQVLQMKVRRLEHLLQLKNV 219
+IAE ++ L AS+ET+ L+ ++R+LE Q K++
Sbjct: 193 EIAELKERLKASRETINCLKNEIRKLEEDDQAKDI 227
>gi|83776598 virus-induced signaling adapter [Homo sapiens]
Length = 540
Score = 30.0 bits (66), Expect = 1.8
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 125 LQELAPQDGSGYMDVGVSQKARGEGVPDPQGGGQLSWDRPPAPRPPA-----YNRALQGD 179
L +LA + S Y Q + PDP L +RP P P A YN + +
Sbjct: 81 LVDLADEVASVYQSY---QPRTSDRPPDPLEPPSLPAERPGPPTPAAAHSIPYNSCREKE 137
Query: 180 PSFVLQIAEKEQELLASQETVQVLQ 204
PS+ + + E + + + Q LQ
Sbjct: 138 PSYPMPVQETQAPESPGENSEQALQ 162
>gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens]
Length = 1049
Score = 30.0 bits (66), Expect = 1.8
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 184 LQIAEKEQELLASQETVQVLQMKVRRLEHLLQLKNVRIEDLSRRLQQAER 233
L++ E L + T+ L++ + LQ K +IE+L R+L+Q ++
Sbjct: 544 LRMTNNEDSLSPTSSTLSNLELDAAEKDRKLQEKEKQIEELKRKLEQEQK 593
>gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens]
Length = 410
Score = 30.0 bits (66), Expect = 1.8
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 108 RQRLEERQRRRKQGAGSLQELAPQDGSGYMDVGVSQKARGEGVPDPQGGGQLSWD--RPP 165
R R ER+R R G ++ G + GV +K R D G L+WD PP
Sbjct: 73 RDRERERERERDPDRGPRRDTHRDAGPRAGEHGVWEKPRQSRTRD--GARGLTWDAAAPP 130
Query: 166 ------APRPPAYNRALQGDP 180
AP PP R +GDP
Sbjct: 131 GPAPWEAPEPPQPQR--KGDP 149
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,719,119
Number of Sequences: 37866
Number of extensions: 504926
Number of successful extensions: 2781
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 2646
Number of HSP's gapped (non-prelim): 207
length of query: 236
length of database: 18,247,518
effective HSP length: 99
effective length of query: 137
effective length of database: 14,498,784
effective search space: 1986333408
effective search space used: 1986333408
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.