Guide to the Human Genome
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Name: DPY19L4 Sequence: fasta or formatted (723aa) NCBI GI: 167466219
Description:

dpy-19-like 4

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         42           2
 C cysteine            1.9         14           1
 D aspartate           2.5         18           3
 E glutamate           6.4         46           3
 F phenylalanine       5.7         41           2
 G glycine             4.4         32           1
 H histidine           1.5         11           1
 I isoleucine          7.9         57           2
 K lysine              5.8         42           2
 L leucine            12.7         92           2
 M methionine          4.0         29           3
 N asparagine          4.0         29           2
 P proline             3.9         28           2
 Q glutamine           3.2         23           2
 R arginine            3.9         28           2
 S serine              6.6         48           2
 T threonine           5.3         38           2
 V valine              6.4         46           1
 W tryptophan          1.9         14           1
 Y tyrosine            6.2         45           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dpy-19-like 4 
DPY19L3               0.400   dpy-19-like 3 
DPY19L2               0.140   dpy-19-like 2 
DPY19L1               0.131   dpy-19-like 1 
CACNA1A               0.006   calcium channel, alpha 1A subunit isoform 4 
CACNA1A               0.006   calcium channel, alpha 1A subunit isoform 3 
NARS                  0.006   asparaginyl-tRNA synthetase 
OR2T5                 0.005   olfactory receptor, family 2, subfamily T, member 5 ...
OR2T29                0.005   olfactory receptor, family 2, subfamily T, member 29...
SPG11                 0.004   spatacsin isoform 2 
SPG11                 0.004   spatacsin isoform 1 
CHST11                0.004   carbohydrate sulfotransferase 11 
TMPRSS11B             0.003   transmembrane protease, serine 11B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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