Guide to the Human Genome
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Name: C14orf119 Sequence: fasta or formatted (140aa) NCBI GI: 8923615
Description:

chromosome 14 open reading frame 119

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         10           2
 C cysteine            1.4          2           1
 D aspartate           4.3          6           1
 E glutamate           8.6         12           1
 F phenylalanine       6.4          9           1
 G glycine             2.9          4           1
 H histidine           2.1          3           1
 I isoleucine          2.1          3           1
 K lysine              3.6          5           1
 L leucine            11.4         16           2
 M methionine          2.9          4           1
 N asparagine          2.9          4           1
 P proline            10.0         14           2
 Q glutamine           6.4          9           1
 R arginine            4.3          6           1
 S serine             11.4         16           4
 T threonine           2.1          3           1
 V valine              5.0          7           1
 W tryptophan          3.6          5           1
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromosome 14 open reading frame 119 
TACC2                 0.015   transforming, acidic coiled-coil containing protein...
FN3K                  0.011   fructosamine 3 kinase 
LOC729041             0.011   PREDICTED: similar to hCG2039305 
LOC729041             0.011   PREDICTED: similar to hCG2039305 
LOC729041             0.011   PREDICTED: similar to hCG2039305 
ECT2L                 0.011   epithelial cell transforming sequence 2 oncogene-li...
FBXW7                 0.011   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.011   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.011   F-box and WD repeat domain containing 7 isoform 2 [H...
DYNC2H1               0.011   dynein, cytoplasmic 2, heavy chain 1 
RANBP3                0.011   RAN binding protein 3 isoform RANBP3-b 
RANBP3                0.011   RAN binding protein 3 isoform RANBP3-a 
RANBP3                0.011   RAN binding protein 3 isoform RANBP3-d 
LOC100292390          0.007   PREDICTED: hypothetical protein 
LOC100291400          0.007   PREDICTED: hypothetical protein XP_002348330 
LOC100288057          0.007   PREDICTED: hypothetical protein XP_002342282 
SPON2                 0.007   spondin 2, extracellular matrix protein 
SPON2                 0.007   spondin 2, extracellular matrix protein 
NAV1                  0.007   neuron navigator 1 
FOXO4                 0.007   forkhead box O4 
OLA1                  0.007   Obg-like ATPase 1 isoform 1 
RBM33                 0.007   RNA binding motif protein 33 
C4orf43               0.007   hypothetical protein LOC55319 
DVL3                  0.007   dishevelled 3 
DYNC1H1               0.007   cytoplasmic dynein 1 heavy chain 1 
SH2D3A                0.007   SH2 domain containing 3A 
ARGLU1                0.007   arginine and glutamate rich 1 
GLB1L3                0.007   galactosidase, beta 1 like 3 
PTGR1                 0.004   prostaglandin reductase 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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