Guide to the Human Genome
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Name: DYNC1H1 Sequence: fasta or formatted (4646aa) NCBI GI: 33350932
Description:

cytoplasmic dynein 1 heavy chain 1

Referenced in:

Dynein and Dynactin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6        307           3
 C cysteine            1.0         48           1
 D aspartate           5.5        256           3
 E glutamate           8.2        383           3
 F phenylalanine       3.8        178           2
 G glycine             4.6        214           5
 H histidine           2.0         92           2
 I isoleucine          5.3        247           2
 K lysine              6.3        293           3
 L leucine            11.1        518           3
 M methionine          2.6        122           2
 N asparagine          4.1        189           3
 P proline             4.0        186           3
 Q glutamine           5.5        257           3
 R arginine            6.2        289           3
 S serine              5.9        273           3
 T threonine           5.1        238           2
 V valine              7.6        351           3
 W tryptophan          1.7         77           1
 Y tyrosine            2.8        128           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytoplasmic dynein 1 heavy chain 1 
DYNC2H1               0.166   dynein, cytoplasmic 2, heavy chain 1 
DNAH10                0.155   dynein, axonemal, heavy chain 10 
DNAH2                 0.152   dynein heavy chain domain 3 
DNAH9                 0.150   dynein, axonemal, heavy chain 9 isoform 2 
DNAH6                 0.149   dynein, axonemal, heavy polypeptide 6 
DNAH1                 0.148   dynein, axonemal, heavy chain 1 
DNAH17                0.146   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH11                0.146   dynein, axonemal, heavy chain 11 
DNAH5                 0.145   dynein, axonemal, heavy chain 5 
DNAH17                0.143   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.143   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH7                 0.140   dynein, axonemal, heavy chain 7 
DNAH8                 0.139   dynein, axonemal, heavy polypeptide 8 
DNAH3                 0.134   dynein, axonemal, heavy chain 3 
DNAH12                0.075   dynein heavy chain domain 2 isoform 1 
DNAH14                0.056   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
DNAH9                 0.022   dynein, axonemal, heavy chain 9 isoform 1 
DNHD1                 0.021   dynein heavy chain domain 1 isoform 1 
CGNL1                 0.003   cingulin-like 1 
MYH2                  0.003   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.003   myosin, heavy chain 2, skeletal muscle, adult [Homo...
CEP250                0.003   centrosomal protein 2 
TRIP11                0.003   thyroid hormone receptor interactor 11 
GOLGB1                0.003   golgi autoantigen, golgin subfamily b, macrogolgin ...
CCDC62                0.003   coiled-coil domain containing 62 isoform b 
CCDC62                0.003   coiled-coil domain containing 62 isoform a 
MYH10                 0.003   myosin, heavy polypeptide 10, non-muscle 
CEP110                0.003   centrosomal protein 110kDa 
TPM4                  0.003   tropomyosin 4 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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