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Search of human proteins with 8923613
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8923613 membrane-associated RING-CH protein I [Homo sapiens]
(272 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8923613 membrane-associated RING-CH protein I [Homo sapiens] 572 e-163
gi|50539414 cellular modulator of immune recognition isoform 7 [... 355 2e-98
gi|50539412 cellular modulator of immune recognition isoform 6 [... 355 2e-98
gi|50539410 cellular modulator of immune recognition isoform 8 [... 355 2e-98
gi|53729332 membrane-associated ring finger (C3HC4) 2 isoform 1 ... 85 8e-17
gi|53729330 membrane-associated ring finger (C3HC4) 2 isoform 1 ... 85 8e-17
gi|30425370 membrane-associated ring finger (C3HC4) 3 [Homo sapi... 84 1e-16
gi|33589846 membrane-associated ring finger (C3HC4) 6 [Homo sapi... 77 2e-14
gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sa... 75 5e-14
gi|53729334 membrane-associated ring finger (C3HC4) 2 isoform 2 ... 75 6e-14
gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo sapi... 73 2e-13
gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens] 70 2e-12
gi|154937342 ring finger protein 190 [Homo sapiens] 60 2e-09
gi|154937340 ring finger protein 190 [Homo sapiens] 60 2e-09
gi|12383066 axotrophin [Homo sapiens] 54 2e-07
gi|8923415 membrane-associated ring finger (C3HC4) 5 [Homo sapiens] 44 2e-04
gi|21389515 ring finger protein 145 [Homo sapiens] 37 0.018
gi|21314654 ring finger protein 139 [Homo sapiens] 35 0.053
gi|150170725 zinc and ring finger 4 [Homo sapiens] 34 0.16
gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo... 32 0.77
gi|231573214 zinc finger protein 294 [Homo sapiens] 31 1.3
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens] 30 2.2
gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens] 29 3.8
gi|66571327 ring finger protein 213 [Homo sapiens] 29 3.8
gi|239755901 PREDICTED: chromosome 12 open reading frame 64 [Hom... 29 5.0
gi|239750386 PREDICTED: chromosome 12 open reading frame 64 [Hom... 29 5.0
gi|239744688 PREDICTED: hypothetical protein LOC283310 [Homo sap... 29 5.0
gi|57165361 ring finger protein 165 [Homo sapiens] 29 5.0
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 28 6.5
gi|150418009 transforming, acidic coiled-coil containing protein... 28 8.5
>gi|8923613 membrane-associated RING-CH protein I [Homo sapiens]
Length = 272
Score = 572 bits (1474), Expect = e-163
Identities = 272/272 (100%), Positives = 272/272 (100%)
Query: 1 MTSSHVCCNFLNMWKKSKISTMYYLNQDAKLSNLFLQASSPTTGTAPRSQSRLSVCPSTQ 60
MTSSHVCCNFLNMWKKSKISTMYYLNQDAKLSNLFLQASSPTTGTAPRSQSRLSVCPSTQ
Sbjct: 1 MTSSHVCCNFLNMWKKSKISTMYYLNQDAKLSNLFLQASSPTTGTAPRSQSRLSVCPSTQ 60
Query: 61 DICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLK 120
DICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLK
Sbjct: 61 DICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLK 120
Query: 121 PLRKWEKLQMTTSERRKIFCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGNDNGVLEWPF 180
PLRKWEKLQMTTSERRKIFCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGNDNGVLEWPF
Sbjct: 121 PLRKWEKLQMTTSERRKIFCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGNDNGVLEWPF 180
Query: 181 WTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLKAYNRVIFVQNCPDTAKKLEKNFSCNVN 240
WTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLKAYNRVIFVQNCPDTAKKLEKNFSCNVN
Sbjct: 181 WTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLKAYNRVIFVQNCPDTAKKLEKNFSCNVN 240
Query: 241 TDIKDAVVVPVPQTGANSLPSAEGGPPEVVSV 272
TDIKDAVVVPVPQTGANSLPSAEGGPPEVVSV
Sbjct: 241 TDIKDAVVVPVPQTGANSLPSAEGGPPEVVSV 272
>gi|50539414 cellular modulator of immune recognition isoform 7
[Homo sapiens]
Length = 291
Score = 355 bits (912), Expect = 2e-98
Identities = 172/241 (71%), Positives = 195/241 (80%), Gaps = 5/241 (2%)
Query: 37 QASSPTTGTAPR---SQSRLSVCPSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSC 93
+A SP + +AP S SR S+ PS+QDICRICHCEGD+ESPLITPC CTG+L FVHQ+C
Sbjct: 51 KAGSPPSASAPAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQAC 110
Query: 94 LHQWIKSSDTRCCELCKYDFIMETKLKPLRKWEKLQMTTSERRKIFCSVTFHVIAITCVV 153
L QWIKSSDTRCCELCKY+FIMETKLKPLRKWEKLQMT+SERRKI CSVTFHVIAITCVV
Sbjct: 111 LQQWIKSSDTRCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVV 170
Query: 154 WSLYVLIDRTAEEIKQGNDNGVLEWPFWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLK 213
WSLYVLIDRTAEEIKQG G+LEWPFWTKLVVVAIGFTGGL+FMYVQCKVYVQLW+RLK
Sbjct: 171 WSLYVLIDRTAEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLK 230
Query: 214 AYNRVIFVQNCPDTAKK--LEKNFSCNVNTDIKDAVVVPVPQTGANSLPSAEGGPPEVVS 271
AYNRVI+VQNCP+T+KK EK+ N + K + T ++ E E++
Sbjct: 231 AYNRVIYVQNCPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIH 290
Query: 272 V 272
V
Sbjct: 291 V 291
>gi|50539412 cellular modulator of immune recognition isoform 6
[Homo sapiens]
Length = 291
Score = 355 bits (912), Expect = 2e-98
Identities = 172/241 (71%), Positives = 195/241 (80%), Gaps = 5/241 (2%)
Query: 37 QASSPTTGTAPR---SQSRLSVCPSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSC 93
+A SP + +AP S SR S+ PS+QDICRICHCEGD+ESPLITPC CTG+L FVHQ+C
Sbjct: 51 KAGSPPSASAPAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQAC 110
Query: 94 LHQWIKSSDTRCCELCKYDFIMETKLKPLRKWEKLQMTTSERRKIFCSVTFHVIAITCVV 153
L QWIKSSDTRCCELCKY+FIMETKLKPLRKWEKLQMT+SERRKI CSVTFHVIAITCVV
Sbjct: 111 LQQWIKSSDTRCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVV 170
Query: 154 WSLYVLIDRTAEEIKQGNDNGVLEWPFWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLK 213
WSLYVLIDRTAEEIKQG G+LEWPFWTKLVVVAIGFTGGL+FMYVQCKVYVQLW+RLK
Sbjct: 171 WSLYVLIDRTAEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLK 230
Query: 214 AYNRVIFVQNCPDTAKK--LEKNFSCNVNTDIKDAVVVPVPQTGANSLPSAEGGPPEVVS 271
AYNRVI+VQNCP+T+KK EK+ N + K + T ++ E E++
Sbjct: 231 AYNRVIYVQNCPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIH 290
Query: 272 V 272
V
Sbjct: 291 V 291
>gi|50539410 cellular modulator of immune recognition isoform 8
[Homo sapiens]
Length = 291
Score = 355 bits (912), Expect = 2e-98
Identities = 172/241 (71%), Positives = 195/241 (80%), Gaps = 5/241 (2%)
Query: 37 QASSPTTGTAPR---SQSRLSVCPSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSC 93
+A SP + +AP S SR S+ PS+QDICRICHCEGD+ESPLITPC CTG+L FVHQ+C
Sbjct: 51 KAGSPPSASAPAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQAC 110
Query: 94 LHQWIKSSDTRCCELCKYDFIMETKLKPLRKWEKLQMTTSERRKIFCSVTFHVIAITCVV 153
L QWIKSSDTRCCELCKY+FIMETKLKPLRKWEKLQMT+SERRKI CSVTFHVIAITCVV
Sbjct: 111 LQQWIKSSDTRCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVV 170
Query: 154 WSLYVLIDRTAEEIKQGNDNGVLEWPFWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLK 213
WSLYVLIDRTAEEIKQG G+LEWPFWTKLVVVAIGFTGGL+FMYVQCKVYVQLW+RLK
Sbjct: 171 WSLYVLIDRTAEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLK 230
Query: 214 AYNRVIFVQNCPDTAKK--LEKNFSCNVNTDIKDAVVVPVPQTGANSLPSAEGGPPEVVS 271
AYNRVI+VQNCP+T+KK EK+ N + K + T ++ E E++
Sbjct: 231 AYNRVIYVQNCPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIH 290
Query: 272 V 272
V
Sbjct: 291 V 291
>gi|53729332 membrane-associated ring finger (C3HC4) 2 isoform 1
[Homo sapiens]
Length = 246
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 57 PSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIME 116
PS CRICH EG L++PC CTGTL VH+SCL +W+ SS+T CELC +F +E
Sbjct: 58 PSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVE 116
Query: 117 TKLKPLRKWEKLQMTTSERRKIFCSV 142
+ +PL +W K +E+R + C +
Sbjct: 117 KRPRPLTEWLKDPGPRTEKRTLCCDM 142
>gi|53729330 membrane-associated ring finger (C3HC4) 2 isoform 1
[Homo sapiens]
Length = 246
Score = 84.7 bits (208), Expect = 8e-17
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 57 PSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIME 116
PS CRICH EG L++PC CTGTL VH+SCL +W+ SS+T CELC +F +E
Sbjct: 58 PSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVE 116
Query: 117 TKLKPLRKWEKLQMTTSERRKIFCSV 142
+ +PL +W K +E+R + C +
Sbjct: 117 KRPRPLTEWLKDPGPRTEKRTLCCDM 142
>gi|30425370 membrane-associated ring finger (C3HC4) 3 [Homo
sapiens]
Length = 253
Score = 84.0 bits (206), Expect = 1e-16
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 62 ICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLKP 121
+CRICH EG + L++PC CTGTL +H+SCL W+ SS+T CELC + F +E K +P
Sbjct: 70 MCRICH-EGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFAVERKPRP 128
Query: 122 LRKWEKLQMTTSERRKIF 139
L +W + E+R +F
Sbjct: 129 LVEWLRNPGPQHEKRTLF 146
>gi|33589846 membrane-associated ring finger (C3HC4) 6 [Homo
sapiens]
Length = 910
Score = 77.0 bits (188), Expect = 2e-14
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 60 QDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDF 113
+DICR+C EG E PL PC CTG+++F+HQ CL QW+K S CELCK+ F
Sbjct: 6 EDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF 59
>gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo
sapiens]
Length = 402
Score = 75.5 bits (184), Expect = 5e-14
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 60 QDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDF-IMETK 118
Q IC+IC +G E+ L+ PCRC G++R+ HQ CL +WI + CELC Y + ++ K
Sbjct: 167 QPICKICF-QGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHVIAIK 225
Query: 119 LKPLRKWEKLQMTTSERRKIFCSVTFHVIAITCVVWSLY 157
+K +W+ + +T E+ ++ + + I V W L+
Sbjct: 226 MKQPCQWQSISITLVEKVQMIAVILGSLFLIASVTWLLW 264
>gi|53729334 membrane-associated ring finger (C3HC4) 2 isoform 2
[Homo sapiens]
Length = 176
Score = 75.1 bits (183), Expect = 6e-14
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 57 PSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIME 116
PS CRICH EG L++PC CTGTL VH+SCL +W+ SS+T CELC +F +E
Sbjct: 58 PSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVE 116
Query: 117 TKLKPL 122
+ +PL
Sbjct: 117 KRPRPL 122
>gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo
sapiens]
Length = 410
Score = 73.2 bits (178), Expect = 2e-13
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 31/220 (14%)
Query: 62 ICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDF-IMETKLK 120
+CRIC +G E+ L++PCRC G+++ HQ CL +WI CELC Y + ++ K
Sbjct: 162 LCRICF-QGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTK 220
Query: 121 PLRKWEKLQMTTSERRKIFCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGNDNGVLEWPF 180
+W+ + +T E+ ++ ++ + I + W ++ +A W
Sbjct: 221 NPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSA------------RWQR 268
Query: 181 WTKLVVVAIGFTGGLVFMYVQC---------KVYVQLWRRLKAYNRVIFVQNCPDTAKKL 231
L + G G FM V C VY ++++R +A N+ V N D K L
Sbjct: 269 QDLLFQICYGMYG---FMDVVCIGLIIHEGPSVY-RIFKRWQAVNQQWKVLNY-DKTKDL 323
Query: 232 EKNFS---CNVNTDIKDAVVVPVPQTGANSLPSAEGGPPE 268
E + N T +P + P+ E GP +
Sbjct: 324 EDQKAGGRTNPRTSSSTQANIPSSEEETAGTPAPEQGPAQ 363
>gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens]
Length = 346
Score = 70.1 bits (170), Expect = 2e-12
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 63 CRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELC--KYDFIMETKLK 120
CRIC +G E+ L++PCRC G++R HQ CL +WI + CELC KY + +
Sbjct: 110 CRICF-QGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAISTKN 168
Query: 121 PLRKWEKLQMTTSERRKIFCSV---TFHVIAITCVVWS 155
PL +W+ + +T E+ +I V F V +I+ ++WS
Sbjct: 169 PL-QWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWS 205
>gi|154937342 ring finger protein 190 [Homo sapiens]
Length = 808
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 61 DICRICHCEGDEES-PLITPCRCTGTLRFVHQSCLHQWIKSSDT--------RCCELCKY 111
D+CRIC G S PL+ PC C G+L+FVHQ CL +W+K T + CE+CK
Sbjct: 657 DLCRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCKQ 716
Query: 112 DFIME 116
+++
Sbjct: 717 GLLVD 721
>gi|154937340 ring finger protein 190 [Homo sapiens]
Length = 808
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 61 DICRICHCEGDEES-PLITPCRCTGTLRFVHQSCLHQWIKSSDT--------RCCELCKY 111
D+CRIC G S PL+ PC C G+L+FVHQ CL +W+K T + CE+CK
Sbjct: 657 DLCRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCKQ 716
Query: 112 DFIME 116
+++
Sbjct: 717 GLLVD 721
>gi|12383066 axotrophin [Homo sapiens]
Length = 704
Score = 53.5 bits (127), Expect = 2e-07
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 61 DICRICHCEGDEESPL-ITPCRCTGTLRFVHQSCLHQWIKS--------SDTRCCELCK 110
D+CRIC S L I PC+CTG+L++VHQ C+ +W+++ CELCK
Sbjct: 550 DLCRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCK 608
>gi|8923415 membrane-associated ring finger (C3HC4) 5 [Homo sapiens]
Length = 278
Score = 43.5 bits (101), Expect = 2e-04
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 63 CRICHC--EGDEESPLITPCRCTGTLRFVHQSCLHQWI------KSSDTRCCELCKYDF- 113
C +C E D + + PCRC G+ ++VHQ+CL +W+ S+ C C ++
Sbjct: 14 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEYL 73
Query: 114 IMETKLKPL 122
I+ KL P+
Sbjct: 74 IVFPKLGPV 82
>gi|21389515 ring finger protein 145 [Homo sapiens]
Length = 691
Score = 37.0 bits (84), Expect = 0.018
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 9/49 (18%)
Query: 61 DICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELC 109
DIC IC+ D +S +ITPC F H CL +W+ +T C LC
Sbjct: 563 DICAICY--QDMKSAVITPCS-----HFFHAGCLKKWLYVQET--CPLC 602
>gi|21314654 ring finger protein 139 [Homo sapiens]
Length = 664
Score = 35.4 bits (80), Expect = 0.053
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 61 DICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLK 120
D+C IC+ E S ITPC + H CL +W+ DT C +C +E +K
Sbjct: 545 DVCAICYHEFTT-SARITPCN-----HYFHALCLRKWLYIQDT--CPMCHQKVYIEDDIK 596
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 33.9 bits (76), Expect = 0.16
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 43 TGTAPRSQSRLSVCPSTQDICRICHCEGDEESPL-ITPCRCTGTLRFVHQSCLHQWIKSS 101
T T ++Q R + D+C IC E +E L I PC T H C+ W +
Sbjct: 291 TSTCQKAQVRTFTWHN--DLCAICLDEYEEGDQLKILPCSHT-----YHCKCIDPWFSQA 343
Query: 102 DTRCCELCK 110
R C +CK
Sbjct: 344 PRRSCPVCK 352
>gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo
sapiens]
Length = 459
Score = 31.6 bits (70), Expect = 0.77
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 70 GDEESPLI-TPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLKP 121
GD E +I T LR +++C Q++ C E+ +D +++ KLKP
Sbjct: 333 GDIEDIIIKTIISAHSVLRHNYRTCFPQYLNGGTCACFEILGFDILLDHKLKP 385
>gi|231573214 zinc finger protein 294 [Homo sapiens]
Length = 1812
Score = 30.8 bits (68), Expect = 1.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 82 CTGTLRFVHQSCLHQWIKSSDTRCCELCKYDF 113
C + H +CL++W SS+ C LC+ F
Sbjct: 1780 CRTCKKKFHSACLYKWFTSSNKSTCPLCRETF 1811
>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 30.0 bits (66), Expect = 2.2
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 27 QDAKLSNLFLQASSPTTGTAPRSQSRLSV----CPSTQDICRICHCEGDEESPLITPCRC 82
Q ++ S+ SS T+ T+ QS + C S+ C C+ E S + C+
Sbjct: 32 QSSQTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSCSCQSSETSSTCS-CQS 90
Query: 83 TGTLRFVHQSCLHQWIKSSDTRCCE 107
+GT SC Q+ ++S T CC+
Sbjct: 91 SGTSS---TSCSWQFSRTSSTCCCQ 112
>gi|158186614 transmembrane protein 118 isoform 1 [Homo sapiens]
Length = 444
Score = 29.3 bits (64), Expect = 3.8
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 9/55 (16%)
Query: 56 CPSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCK 110
C DIC IC E E PLI C+ + CL W+ R C LC+
Sbjct: 377 CTEAGDICAICQAEFRE--PLILLCQ-----HVFCEECLCLWLDRE--RTCPLCR 422
>gi|66571327 ring finger protein 213 [Homo sapiens]
Length = 3280
Score = 29.3 bits (64), Expect = 3.8
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 12/61 (19%)
Query: 45 TAPRSQSRLSVCPSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTR 104
TA ++ SR + P C IC GD + P+ PC LR CL W S
Sbjct: 2057 TASKTLSRFGIQP-----CSICL--GDAKDPVCLPCDHVHCLR-----CLRAWFASEQMI 2104
Query: 105 C 105
C
Sbjct: 2105 C 2105
>gi|239755901 PREDICTED: chromosome 12 open reading frame 64 [Homo
sapiens]
Length = 2250
Score = 28.9 bits (63), Expect = 5.0
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Query: 59 TQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCEL 108
T D C + EG E P + PC ++CL+QW T C L
Sbjct: 1695 TPDYCSLSCPEGKEYQPCVRPCEA--------RTCLNQWF-YGHTSCLNL 1735
>gi|239750386 PREDICTED: chromosome 12 open reading frame 64 [Homo
sapiens]
Length = 2250
Score = 28.9 bits (63), Expect = 5.0
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Query: 59 TQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCEL 108
T D C + EG E P + PC ++CL+QW T C L
Sbjct: 1695 TPDYCSLSCPEGKEYQPCVRPCEA--------RTCLNQWF-YGHTSCLNL 1735
>gi|239744688 PREDICTED: hypothetical protein LOC283310 [Homo sapiens]
Length = 2250
Score = 28.9 bits (63), Expect = 5.0
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Query: 59 TQDICRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCEL 108
T D C + EG E P + PC ++CL+QW T C L
Sbjct: 1695 TPDYCSLSCPEGKEYQPCVRPCEA--------RTCLNQWF-YGHTSCLNL 1735
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 28.9 bits (63), Expect = 5.0
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Query: 59 TQDICRIC-HCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMET 117
T + C IC D E PC + HQ C+ QW+ S + C +C+ D +ET
Sbjct: 290 TDEKCTICLSMLEDGEDVRRLPC-----MHLFHQLCVDQWLAMS--KKCPICRVD--IET 340
Query: 118 KL 119
+L
Sbjct: 341 QL 342
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 28.5 bits (62), Expect = 6.5
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 201 QCKVYVQLWRRLKAYNRVIFVQNCPDT-----AKKLEKNFSCNVNTDIKDAVVVPVPQTG 255
+CK ++LWR++ A ++ ++Q D K++K +N K +
Sbjct: 2041 RCKQIMKLWRKVPAADKAPYLQKAKDNRAAHRINKVQKQAESQINKQTKVGDIARKTDRP 2100
Query: 256 ANSL-----PSAEGGPP 267
A L P A G PP
Sbjct: 2101 ALHLRIPPQPGALGSPP 2117
>gi|150418009 transforming, acidic coiled-coil containing protein 2
isoform a [Homo sapiens]
Length = 2948
Score = 28.1 bits (61), Expect = 8.5
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 223 NCPDTAKKLEKNFSCNVNTDIKDAVVVPVPQTGANSLPSAEGGPPEVV 270
+CPD AK L ++ +D ++A P T + P+ PPEV+
Sbjct: 1935 SCPDPAKDLSRS------SDSEEAFETPESTTPVKAPPAPPPPPPEVI 1976
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.134 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,295,576
Number of Sequences: 37866
Number of extensions: 494486
Number of successful extensions: 1707
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1675
Number of HSP's gapped (non-prelim): 38
length of query: 272
length of database: 18,247,518
effective HSP length: 101
effective length of query: 171
effective length of database: 14,423,052
effective search space: 2466341892
effective search space used: 2466341892
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.